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Lag0008103 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0008103
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase
Genome locationchr9:12230354..12230791
RNA-Seq ExpressionLag0008103
SyntenyLag0008103
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022151688.1 uncharacterized protein LOC111019603 [Momordica charantia]1.3e-1551.65Show/hide
Query:  QPQNPHLGSAVPNDSQFIRDFKCYGPPTFNGCSEKAIAA-----ELEAMFDYMDCEYRLKVKEAVFMLRDEAHMWWKSIEASEDLVNEPVT
        Q   P    A+ +++QFIRDF+ YGPPTFNG SEKA        ELEA++ Y+ C  +LKVK AVFMLR EA  WW  +   ED  NEP+T
Subjt:  QPQNPHLGSAVPNDSQFIRDFKCYGPPTFNGCSEKAIAA-----ELEAMFDYMDCEYRLKVKEAVFMLRDEAHMWWKSIEASEDLVNEPVT

XP_022156328.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111023249 [Momordica charantia]5.7e-1651.65Show/hide
Query:  QPQNPHLGSAVPNDSQFIRDFKCYGPPTFNGCSEKAIAA-----ELEAMFDYMDCEYRLKVKEAVFMLRDEAHMWWKSIEASEDLVNEPVT
        Q Q P       ++ QFIRDFKC+GPP FNG SE+  AA     ELEA++ Y+ C    KV+ AVFMLR EA  WW+S+ A+ED  N PVT
Subjt:  QPQNPHLGSAVPNDSQFIRDFKCYGPPTFNGCSEKAIAA-----ELEAMFDYMDCEYRLKVKEAVFMLRDEAHMWWKSIEASEDLVNEPVT

XP_022158302.1 uncharacterized protein LOC111024816 [Momordica charantia]1.1e-1448.62Show/hide
Query:  NVEWGENPHRNER-----QPQNPHLGSAVPNDSQFIRDFKCYGPPTFNGCSEKAIAA-----ELEAMFDYMDCEYRLKVKEAVFMLRDEAHMWWKSIEAS
        +VE G+ P    R     Q   P    A   ++QFI+DFK YGPPTF+G SEKA A+     ELEA + Y+ C  + KVK AVFMLR EA  WW SI  +
Subjt:  NVEWGENPHRNER-----QPQNPHLGSAVPNDSQFIRDFKCYGPPTFNGCSEKAIAA-----ELEAMFDYMDCEYRLKVKEAVFMLRDEAHMWWKSIEAS

Query:  EDLVNEPVT
        EDL N P+T
Subjt:  EDLVNEPVT

XP_022158749.1 uncharacterized protein LOC111025213 [Momordica charantia]2.8e-1550.52Show/hide
Query:  PHRNERQPQNPHLGSAVP-NDSQFIRDFKCYGPPTFNGCSEKAIAA-----ELEAMFDYMDCEYRLKVKEAVFMLRDEAHMWWKSIEASEDLVNEPV
        P    R+  +P +  AVP ++++FI+DFK YGPPTF+G SE+A AA     ELEA++ Y+ CE + KVK AVFMLR EA  WW S+ A+ED  N P+
Subjt:  PHRNERQPQNPHLGSAVP-NDSQFIRDFKCYGPPTFNGCSEKAIAA-----ELEAMFDYMDCEYRLKVKEAVFMLRDEAHMWWKSIEASEDLVNEPV

XP_022159307.1 uncharacterized protein LOC111025716, partial [Momordica charantia]1.1e-1452.75Show/hide
Query:  QPQNPHLGSAVPNDSQFIRDFKCYGPPTFNGCSEKAIAA-----ELEAMFDYMDCEYRLKVKEAVFMLRDEAHMWWKSIEASEDLVNEPVT
        Q Q P       +++QFI+DFK YGPPTF+G SEKA AA     ELEA++ Y+ CE + K K AVFMLR EA  WW S+ A+ED  N P T
Subjt:  QPQNPHLGSAVPNDSQFIRDFKCYGPPTFNGCSEKAIAA-----ELEAMFDYMDCEYRLKVKEAVFMLRDEAHMWWKSIEASEDLVNEPVT

TrEMBL top hitse value%identityAlignment
A0A6J1DCW8 uncharacterized protein LOC1110196036.1e-1651.65Show/hide
Query:  QPQNPHLGSAVPNDSQFIRDFKCYGPPTFNGCSEKAIAA-----ELEAMFDYMDCEYRLKVKEAVFMLRDEAHMWWKSIEASEDLVNEPVT
        Q   P    A+ +++QFIRDF+ YGPPTFNG SEKA        ELEA++ Y+ C  +LKVK AVFMLR EA  WW  +   ED  NEP+T
Subjt:  QPQNPHLGSAVPNDSQFIRDFKCYGPPTFNGCSEKAIAA-----ELEAMFDYMDCEYRLKVKEAVFMLRDEAHMWWKSIEASEDLVNEPVT

A0A6J1DQB9 Reverse transcriptase2.7e-1651.65Show/hide
Query:  QPQNPHLGSAVPNDSQFIRDFKCYGPPTFNGCSEKAIAA-----ELEAMFDYMDCEYRLKVKEAVFMLRDEAHMWWKSIEASEDLVNEPVT
        Q Q P       ++ QFIRDFKC+GPP FNG SE+  AA     ELEA++ Y+ C    KV+ AVFMLR EA  WW+S+ A+ED  N PVT
Subjt:  QPQNPHLGSAVPNDSQFIRDFKCYGPPTFNGCSEKAIAA-----ELEAMFDYMDCEYRLKVKEAVFMLRDEAHMWWKSIEASEDLVNEPVT

A0A6J1DWW5 uncharacterized protein LOC1110248165.2e-1548.62Show/hide
Query:  NVEWGENPHRNER-----QPQNPHLGSAVPNDSQFIRDFKCYGPPTFNGCSEKAIAA-----ELEAMFDYMDCEYRLKVKEAVFMLRDEAHMWWKSIEAS
        +VE G+ P    R     Q   P    A   ++QFI+DFK YGPPTF+G SEKA A+     ELEA + Y+ C  + KVK AVFMLR EA  WW SI  +
Subjt:  NVEWGENPHRNER-----QPQNPHLGSAVPNDSQFIRDFKCYGPPTFNGCSEKAIAA-----ELEAMFDYMDCEYRLKVKEAVFMLRDEAHMWWKSIEAS

Query:  EDLVNEPVT
        EDL N P+T
Subjt:  EDLVNEPVT

A0A6J1DZH0 uncharacterized protein LOC1110257165.2e-1552.75Show/hide
Query:  QPQNPHLGSAVPNDSQFIRDFKCYGPPTFNGCSEKAIAA-----ELEAMFDYMDCEYRLKVKEAVFMLRDEAHMWWKSIEASEDLVNEPVT
        Q Q P       +++QFI+DFK YGPPTF+G SEKA AA     ELEA++ Y+ CE + K K AVFMLR EA  WW S+ A+ED  N P T
Subjt:  QPQNPHLGSAVPNDSQFIRDFKCYGPPTFNGCSEKAIAA-----ELEAMFDYMDCEYRLKVKEAVFMLRDEAHMWWKSIEASEDLVNEPVT

A0A6J1E0B4 uncharacterized protein LOC1110252131.4e-1550.52Show/hide
Query:  PHRNERQPQNPHLGSAVP-NDSQFIRDFKCYGPPTFNGCSEKAIAA-----ELEAMFDYMDCEYRLKVKEAVFMLRDEAHMWWKSIEASEDLVNEPV
        P    R+  +P +  AVP ++++FI+DFK YGPPTF+G SE+A AA     ELEA++ Y+ CE + KVK AVFMLR EA  WW S+ A+ED  N P+
Subjt:  PHRNERQPQNPHLGSAVP-NDSQFIRDFKCYGPPTFNGCSEKAIAA-----ELEAMFDYMDCEYRLKVKEAVFMLRDEAHMWWKSIEASEDLVNEPV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCCTCGCTATCCTAGACCTAGAGCTCGAGTAGGTAGAACAGAAGTTCAAGGTGATGAAGCTAATGTCGAATGGGGAGAAAACCCTCATAGGAACGAAAGGCAACC
ACAAAATCCACATCTAGGTTCTGCTGTACCAAATGACTCCCAATTCATAAGGGACTTTAAGTGCTATGGACCTCCCACTTTCAATGGTTGCTCTGAGAAAGCCATCGCTG
CAGAGCTTGAGGCCATGTTCGACTACATGGATTGTGAATATCGTTTGAAAGTTAAGGAAGCAGTCTTCATGCTCCGAGATGAAGCGCATATGTGGTGGAAATCCATTGAA
GCCTCTGAGGACTTGGTCAATGAGCCTGTCACCTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCTCCTCGCTATCCTAGACCTAGAGCTCGAGTAGGTAGAACAGAAGTTCAAGGTGATGAAGCTAATGTCGAATGGGGAGAAAACCCTCATAGGAACGAAAGGCAACC
ACAAAATCCACATCTAGGTTCTGCTGTACCAAATGACTCCCAATTCATAAGGGACTTTAAGTGCTATGGACCTCCCACTTTCAATGGTTGCTCTGAGAAAGCCATCGCTG
CAGAGCTTGAGGCCATGTTCGACTACATGGATTGTGAATATCGTTTGAAAGTTAAGGAAGCAGTCTTCATGCTCCGAGATGAAGCGCATATGTGGTGGAAATCCATTGAA
GCCTCTGAGGACTTGGTCAATGAGCCTGTCACCTGA
Protein sequenceShow/hide protein sequence
MPPRYPRPRARVGRTEVQGDEANVEWGENPHRNERQPQNPHLGSAVPNDSQFIRDFKCYGPPTFNGCSEKAIAAELEAMFDYMDCEYRLKVKEAVFMLRDEAHMWWKSIE
ASEDLVNEPVT