; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0008108 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0008108
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr9:12359860..12360827
RNA-Seq ExpressionLag0008108
SyntenyLag0008108
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022142767.1 uncharacterized protein LOC111012805 [Momordica charantia]4.3e-2739.58Show/hide
Query:  QKFKVEGYSEGATLVAITAGLEDERLLNSIGKSQPRTYAEFVYRAQKYMSAEELLKSKKSGREHKRHSSFDHDSKKHKRQQTDKRGRGRPDNGRGRPDQG
        +K +VEG ++  +L+A   G+ DE L  S GK  P T++E + RAQ+YMSA E   SK+     +            KR+++  + +G     R R  Q 
Subjt:  QKFKVEGYSEGATLVAITAGLEDERLLNSIGKSQPRTYAEFVYRAQKYMSAEELLKSKKSGREHKRHSSFDHDSKKHKRQQTDKRGRGRPDNGRGRPDQG

Query:  DYLKKFEKYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPNNKDKSQYCLFHRDHGHSTRNYTQLKDEIEALIQNGYLKEFTTKAEADQRWPS
        D  +KFEKYT T++P EQ+LMEI+N  LL  P ++ ++   + K +YCLFH DHGH+T++   LK+E+E LI  GYLKE+  + +A Q   S
Subjt:  DYLKKFEKYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPNNKDKSQYCLFHRDHGHSTRNYTQLKDEIEALIQNGYLKEFTTKAEADQRWPS

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]5.5e-3041.15Show/hide
Query:  QKFKVEGYSEGATLVAITAGLEDERLLNSIGKSQPRTYAEFVYRAQKYMSAEELLKSKKSGREHKRHSSFDHDSKKHKRQQTDKRGRGRPDNGRGRPDQG
        +K +VEG ++  +L+A  +G+ DE L  S GK  P T++E + RAQ+YMSA E   SK+           D      KR+++  + +G     R R  Q 
Subjt:  QKFKVEGYSEGATLVAITAGLEDERLLNSIGKSQPRTYAEFVYRAQKYMSAEELLKSKKSGREHKRHSSFDHDSKKHKRQQTDKRGRGRPDNGRGRPDQG

Query:  DYLKKFEKYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPNNKDKSQYCLFHRDHGHSTRNYTQLKDEIEALIQNGYLKEFTTKAEADQRWPS
        D  +KFEKYTPT++P EQ+LMEI++  LL  P ++K++   + K +YCLFHRDHGH+T++   LK+E+E LI+ GYLKE+  + +A Q   S
Subjt:  DYLKKFEKYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPNNKDKSQYCLFHRDHGHSTRNYTQLKDEIEALIQNGYLKEFTTKAEADQRWPS

XP_022159192.1 uncharacterized protein LOC111025612 [Momordica charantia]8.2e-2643.45Show/hide
Query:  AGLEDERLLNSIGKSQPRTYAEFVYRAQKYMSAEELLKSKKSGREHKRHSSFDHDSKKHKRQQTDKRGRGRPDNGRGRPDQGDYLKKFEKYTPTSIPQEQ
        +G++DE L  S GK  P T+AE + RAQKYMSAEE    KK     +     +   +K    + +K+ R           Q D  +KFEKYTPT++P EQ
Subjt:  AGLEDERLLNSIGKSQPRTYAEFVYRAQKYMSAEELLKSKKSGREHKRHSSFDHDSKKHKRQQTDKRGRGRPDNGRGRPDQGDYLKKFEKYTPTSIPQEQ

Query:  ILMEIRNTNLLNAPRKLKSNPNNKDKSQYCLFHRDHGHSTRNYTQLKDEIEALIQNGYLKEFTTKAEA
        +LMEI++  LL  P  +K+ PN + K +YCLFHRDHGH+T +   LK+E+E LI+ GYLKE+    +A
Subjt:  ILMEIRNTNLLNAPRKLKSNPNNKDKSQYCLFHRDHGHSTRNYTQLKDEIEALIQNGYLKEFTTKAEA

XP_022159368.1 uncharacterized protein LOC111025785 [Momordica charantia]7.9e-2939.29Show/hide
Query:  QKFKVEGYSEGATLVAITAGLEDERLLNSIGKSQPRTYAEFVYRAQKYMSAEELLKSKKSGREHKRHSSFDHDSKKHKRQQTDKRGRGRPDNGRGRPDQG
        +K ++E  ++  +L+A  +G+ DE L  S GK  P T++E + RAQ+YMSA E   SK+           D      KR+++  + +G     R R  Q 
Subjt:  QKFKVEGYSEGATLVAITAGLEDERLLNSIGKSQPRTYAEFVYRAQKYMSAEELLKSKKSGREHKRHSSFDHDSKKHKRQQTDKRGRGRPDNGRGRPDQG

Query:  DYLKKFEKYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPNNKDKSQYCLFHRDHGHSTRNYTQLKDEIEALIQNGYLKEFTTKAEADQRWPSLGRP
        D  +KFEKYTPT++P EQ+LMEI++  LL  P ++K     + K +YCLFHRDH H+T++Y  LK+E+E LI+ GYL+E+  + +A Q   S   P
Subjt:  DYLKKFEKYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPNNKDKSQYCLFHRDHGHSTRNYTQLKDEIEALIQNGYLKEFTTKAEADQRWPSLGRP

XP_023905316.1 uncharacterized protein LOC112017085 [Quercus suber]5.9e-2437.57Show/hide
Query:  QKFKVEGYSEGATLVAITAGLEDERLLNSIGKSQPRTYAEFVYRAQKYMSAEELLKSKKSGREHKRHSSFDHDSKKHKRQQTDKRGRGRPDNGRGRPDQG
        + F ++   +   + A T GL + + L S+ K+ P+T +E +YRA KYM+AE+ L +    RE K         +K +RQ+  ++ R R D+ R +P  G
Subjt:  QKFKVEGYSEGATLVAITAGLEDERLLNSIGKSQPRTYAEFVYRAQKYMSAEELLKSKKSGREHKRHSSFDHDSKKHKRQQTDKRGRGRPDNGRGRPDQG

Query:  DYLKKFEKYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPNNKDKSQYCLFHRDHGHSTRNYTQLKDEIEALIQNGYLKEFTTKAEADQR
            KF  +TP + P +Q+LM+I++   L  P KLK +PN + + +YC FHRDH H T +Y  LK +IEALI+ G L++F +K   DQ+
Subjt:  DYLKKFEKYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPNNKDKSQYCLFHRDHGHSTRNYTQLKDEIEALIQNGYLKEFTTKAEADQR

TrEMBL top hitse value%identityAlignment
A0A6J1CNT2 uncharacterized protein LOC1110128052.1e-2739.58Show/hide
Query:  QKFKVEGYSEGATLVAITAGLEDERLLNSIGKSQPRTYAEFVYRAQKYMSAEELLKSKKSGREHKRHSSFDHDSKKHKRQQTDKRGRGRPDNGRGRPDQG
        +K +VEG ++  +L+A   G+ DE L  S GK  P T++E + RAQ+YMSA E   SK+     +            KR+++  + +G     R R  Q 
Subjt:  QKFKVEGYSEGATLVAITAGLEDERLLNSIGKSQPRTYAEFVYRAQKYMSAEELLKSKKSGREHKRHSSFDHDSKKHKRQQTDKRGRGRPDNGRGRPDQG

Query:  DYLKKFEKYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPNNKDKSQYCLFHRDHGHSTRNYTQLKDEIEALIQNGYLKEFTTKAEADQRWPS
        D  +KFEKYT T++P EQ+LMEI+N  LL  P ++ ++   + K +YCLFH DHGH+T++   LK+E+E LI  GYLKE+  + +A Q   S
Subjt:  DYLKKFEKYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPNNKDKSQYCLFHRDHGHSTRNYTQLKDEIEALIQNGYLKEFTTKAEADQRWPS

A0A6J1DWY0 uncharacterized protein LOC1110252932.7e-3041.15Show/hide
Query:  QKFKVEGYSEGATLVAITAGLEDERLLNSIGKSQPRTYAEFVYRAQKYMSAEELLKSKKSGREHKRHSSFDHDSKKHKRQQTDKRGRGRPDNGRGRPDQG
        +K +VEG ++  +L+A  +G+ DE L  S GK  P T++E + RAQ+YMSA E   SK+           D      KR+++  + +G     R R  Q 
Subjt:  QKFKVEGYSEGATLVAITAGLEDERLLNSIGKSQPRTYAEFVYRAQKYMSAEELLKSKKSGREHKRHSSFDHDSKKHKRQQTDKRGRGRPDNGRGRPDQG

Query:  DYLKKFEKYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPNNKDKSQYCLFHRDHGHSTRNYTQLKDEIEALIQNGYLKEFTTKAEADQRWPS
        D  +KFEKYTPT++P EQ+LMEI++  LL  P ++K++   + K +YCLFHRDHGH+T++   LK+E+E LI+ GYLKE+  + +A Q   S
Subjt:  DYLKKFEKYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPNNKDKSQYCLFHRDHGHSTRNYTQLKDEIEALIQNGYLKEFTTKAEADQRWPS

A0A6J1DYL6 uncharacterized protein LOC1110257853.8e-2939.29Show/hide
Query:  QKFKVEGYSEGATLVAITAGLEDERLLNSIGKSQPRTYAEFVYRAQKYMSAEELLKSKKSGREHKRHSSFDHDSKKHKRQQTDKRGRGRPDNGRGRPDQG
        +K ++E  ++  +L+A  +G+ DE L  S GK  P T++E + RAQ+YMSA E   SK+           D      KR+++  + +G     R R  Q 
Subjt:  QKFKVEGYSEGATLVAITAGLEDERLLNSIGKSQPRTYAEFVYRAQKYMSAEELLKSKKSGREHKRHSSFDHDSKKHKRQQTDKRGRGRPDNGRGRPDQG

Query:  DYLKKFEKYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPNNKDKSQYCLFHRDHGHSTRNYTQLKDEIEALIQNGYLKEFTTKAEADQRWPSLGRP
        D  +KFEKYTPT++P EQ+LMEI++  LL  P ++K     + K +YCLFHRDH H+T++Y  LK+E+E LI+ GYL+E+  + +A Q   S   P
Subjt:  DYLKKFEKYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPNNKDKSQYCLFHRDHGHSTRNYTQLKDEIEALIQNGYLKEFTTKAEADQRWPSLGRP

A0A6J1DZ52 uncharacterized protein LOC1110256124.0e-2643.45Show/hide
Query:  AGLEDERLLNSIGKSQPRTYAEFVYRAQKYMSAEELLKSKKSGREHKRHSSFDHDSKKHKRQQTDKRGRGRPDNGRGRPDQGDYLKKFEKYTPTSIPQEQ
        +G++DE L  S GK  P T+AE + RAQKYMSAEE    KK     +     +   +K    + +K+ R           Q D  +KFEKYTPT++P EQ
Subjt:  AGLEDERLLNSIGKSQPRTYAEFVYRAQKYMSAEELLKSKKSGREHKRHSSFDHDSKKHKRQQTDKRGRGRPDNGRGRPDQGDYLKKFEKYTPTSIPQEQ

Query:  ILMEIRNTNLLNAPRKLKSNPNNKDKSQYCLFHRDHGHSTRNYTQLKDEIEALIQNGYLKEFTTKAEA
        +LMEI++  LL  P  +K+ PN + K +YCLFHRDHGH+T +   LK+E+E LI+ GYLKE+    +A
Subjt:  ILMEIRNTNLLNAPRKLKSNPNNKDKSQYCLFHRDHGHSTRNYTQLKDEIEALIQNGYLKEFTTKAEA

A0A7N2N9G0 Reverse transcriptase5.4e-2335.98Show/hide
Query:  QKFKVEGYSEGATLVAITAGLEDERLLNSIGKSQPRTYAEFVYRAQKYMSAEE-LLKSKKSGREHKRHSSFDHDSKKHKRQQTDKRGRGRPDNGRGRPDQ
        +   V+   +   + A T GL+  + L S+ K+ P+T +E +YRA KYM+AE+ LL  ++  R+ +R      D  + K +  D+R   RP     RP  
Subjt:  QKFKVEGYSEGATLVAITAGLEDERLLNSIGKSQPRTYAEFVYRAQKYMSAEE-LLKSKKSGREHKRHSSFDHDSKKHKRQQTDKRGRGRPDNGRGRPDQ

Query:  GDYLKKFEKYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPNNKDKSQYCLFHRDHGHSTRNYTQLKDEIEALIQNGYLKEFTTKAEAD--------QRWP
        G    +F  +TP + P +Q+LM+I++   L  P KLKS+PN + + +YC FHRDHGH T +   LK +IEALI+ G L+ F +K  AD        +R  
Subjt:  GDYLKKFEKYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPNNKDKSQYCLFHRDHGHSTRNYTQLKDEIEALIQNGYLKEFTTKAEAD--------QRWP

Query:  SLGRPEITQAKMVV
           RP I   +M+V
Subjt:  SLGRPEITQAKMVV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGCTGAGGTGCCCCAAAAGTTCAAGGTTGAGGGATACAGTGAGGGAGCAACCCTAGTAGCCATCACAGCCGGATTGGAAGACGAAAGACTGCTCAATTCAATAGG
TAAGAGCCAACCTCGAACCTATGCAGAGTTCGTCTACCGGGCACAGAAATACATGAGCGCAGAAGAGTTGCTCAAATCAAAGAAGTCGGGACGAGAACACAAAAGACATT
CTTCATTTGACCACGACAGTAAAAAACACAAGAGGCAGCAAACAGACAAAAGAGGTCGAGGTCGACCAGACAATGGCCGAGGCCGACCAGACCAAGGAGACTACTTGAAA
AAGTTTGAAAAGTACACCCCTACTTCAATCCCACAGGAGCAGATCTTGATGGAGATACGGAATACAAACCTTCTCAATGCGCCCAGGAAGCTGAAGTCAAATCCTAACAA
CAAAGACAAAAGTCAGTATTGTCTCTTCCATCGAGATCATGGACATTCAACTAGGAACTACACTCAGCTAAAGGACGAGATTGAAGCGCTGATTCAGAATGGATACTTGA
AGGAGTTCACCACAAAGGCCGAGGCTGACCAGAGATGGCCGAGCCTCGGTCGACCAGAGATTACCCAGGCAAAGATGGTTGTGGATCTCCTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAAGCTGAGGTGCCCCAAAAGTTCAAGGTTGAGGGATACAGTGAGGGAGCAACCCTAGTAGCCATCACAGCCGGATTGGAAGACGAAAGACTGCTCAATTCAATAGG
TAAGAGCCAACCTCGAACCTATGCAGAGTTCGTCTACCGGGCACAGAAATACATGAGCGCAGAAGAGTTGCTCAAATCAAAGAAGTCGGGACGAGAACACAAAAGACATT
CTTCATTTGACCACGACAGTAAAAAACACAAGAGGCAGCAAACAGACAAAAGAGGTCGAGGTCGACCAGACAATGGCCGAGGCCGACCAGACCAAGGAGACTACTTGAAA
AAGTTTGAAAAGTACACCCCTACTTCAATCCCACAGGAGCAGATCTTGATGGAGATACGGAATACAAACCTTCTCAATGCGCCCAGGAAGCTGAAGTCAAATCCTAACAA
CAAAGACAAAAGTCAGTATTGTCTCTTCCATCGAGATCATGGACATTCAACTAGGAACTACACTCAGCTAAAGGACGAGATTGAAGCGCTGATTCAGAATGGATACTTGA
AGGAGTTCACCACAAAGGCCGAGGCTGACCAGAGATGGCCGAGCCTCGGTCGACCAGAGATTACCCAGGCAAAGATGGTTGTGGATCTCCTCTAG
Protein sequenceShow/hide protein sequence
MKAEVPQKFKVEGYSEGATLVAITAGLEDERLLNSIGKSQPRTYAEFVYRAQKYMSAEELLKSKKSGREHKRHSSFDHDSKKHKRQQTDKRGRGRPDNGRGRPDQGDYLK
KFEKYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPNNKDKSQYCLFHRDHGHSTRNYTQLKDEIEALIQNGYLKEFTTKAEADQRWPSLGRPEITQAKMVVDLL