; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0008110 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0008110
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr9:12500186..12502641
RNA-Seq ExpressionLag0008110
SyntenyLag0008110
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022142767.1 uncharacterized protein LOC111012805 [Momordica charantia]4.0e-2335.58Show/hide
Query:  VERYDDGVALTAVILGLQDERLLNSIGESQPRTYVEFMTRAQIYISAEELLKSKQEERESRGMSVSDRRREDKGKRHQAEGRGRSRPDHSSANGRGRPEA
        VE   D V+L A I G++DE L  S G+  P T+ E ++RAQ Y+SA E   SK+E    R    +D++RE  G + Q                  R E 
Subjt:  VERYDDGVALTAVILGLQDERLLNSIGESQPRTYVEFMTRAQIYISAEELLKSKQEERESRGMSVSDRRREDKGKRHQAEGRGRSRPDHSSANGRGRPEA

Query:  KEMQGRAEPKSRYDRYTPLTASLEQVLTAIQDTNLLKRLEKLRSDPDRRNRNKYCMFHEDHGHTTRECIQLRDEIETLIREGYLKEFVGAIEARGRYQQT
        ++   + +P  ++++YT  T  LEQVL  I++  LLK  E++ +   +R++ +YC+FH DHGH T++C  L++E+E LI  GYLKE+V   +A    +  
Subjt:  KEMQGRAEPKSRYDRYTPLTASLEQVLTAIQDTNLLKRLEKLRSDPDRRNRNKYCMFHEDHGHTTRECIQLRDEIETLIREGYLKEFVGAIEARGRYQQT

Query:  KARVEPIR
        K+    IR
Subjt:  KARVEPIR

XP_022150613.1 uncharacterized protein LOC111018708, partial [Momordica charantia]3.4e-2234.98Show/hide
Query:  VERYDDGVALTAVILGLQDERLLNSIGESQPRTYVEFMTRAQIYISAEELLKSKQEERESRGMSVSDRRREDKGKRHQAEGRGRSRPDHSSANGRGRPEA
        V    D  A+   + GL DE L   +GE  P T+ E + +A+  I  +ELL++K                   G+  +  GRGRS  D   A+ + + + 
Subjt:  VERYDDGVALTAVILGLQDERLLNSIGESQPRTYVEFMTRAQIYISAEELLKSKQEERESRGMSVSDRRREDKGKRHQAEGRGRSRPDHSSANGRGRPEA

Query:  KEMQGRAE--------PKSR-YDRYTPLTASLEQVLTAIQDT---NLLKRLEKLRSDPDRRNRNKYCMFHEDHGHTTRECIQLRDEIETLIREGYLKEFV
            GRAE         KSR Y+R+TP T  + ++LT I+++    LLKR EKLR  P+RR+++KYC FH +HGH T +C +L+ +IE LI++GY K+FV
Subjt:  KEMQGRAE--------PKSR-YDRYTPLTASLEQVLTAIQDT---NLLKRLEKLRSDPDRRNRNKYCMFHEDHGHTTRECIQLRDEIETLIREGYLKEFV

Query:  G---AIEARGRYQQTKARVEPIR
        G      A  + ++ ++R  P R
Subjt:  G---AIEARGRYQQTKARVEPIR

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]9.6e-2536.06Show/hide
Query:  VERYDDGVALTAVILGLQDERLLNSIGESQPRTYVEFMTRAQIYISAEELLKSKQEERESRGMSVSDRRREDKGKRHQAEGRGRSRPDHSSANGRGRPEA
        VE   D V+L A + G++DE L  S G+  P T+ E ++RAQ Y+SA E   SK+E    R    +D +RE  G + Q                  R E 
Subjt:  VERYDDGVALTAVILGLQDERLLNSIGESQPRTYVEFMTRAQIYISAEELLKSKQEERESRGMSVSDRRREDKGKRHQAEGRGRSRPDHSSANGRGRPEA

Query:  KEMQGRAEPKSRYDRYTPLTASLEQVLTAIQDTNLLKRLEKLRSDPDRRNRNKYCMFHEDHGHTTRECIQLRDEIETLIREGYLKEFVGAIEARGRYQQT
        ++   + +P  ++++YTP T  +EQVL  I+D  LLK  E++++   +R++ +YC+FH DHGH T++C  L++E+E LIR GYLKE+V   +A    +  
Subjt:  KEMQGRAEPKSRYDRYTPLTASLEQVLTAIQDTNLLKRLEKLRSDPDRRNRNKYCMFHEDHGHTTRECIQLRDEIETLIREGYLKEFVGAIEARGRYQQT

Query:  KARVEPIR
        K+    IR
Subjt:  KARVEPIR

XP_022159368.1 uncharacterized protein LOC111025785 [Momordica charantia]3.4e-2234.62Show/hide
Query:  VERYDDGVALTAVILGLQDERLLNSIGESQPRTYVEFMTRAQIYISAEELLKSKQEERESRGMSVSDRRREDKGKRHQAEGRGRSRPDHSSANGRGRPEA
        +E   D V+L A + G++DE L  S G+  P T+ E ++RAQ Y+SA E   SK+E    R    +D++RE  G + Q                  R E 
Subjt:  VERYDDGVALTAVILGLQDERLLNSIGESQPRTYVEFMTRAQIYISAEELLKSKQEERESRGMSVSDRRREDKGKRHQAEGRGRSRPDHSSANGRGRPEA

Query:  KEMQGRAEPKSRYDRYTPLTASLEQVLTAIQDTNLLKRLEKLRSDPDRRNRNKYCMFHEDHGHTTRECIQLRDEIETLIREGYLKEFVGAIEARGRYQQT
        ++   + +P  ++++YTP T  LEQVL  I+D  LLK  E+++    +R++ +YC+FH DH H T++   L++E+E LIR GYL+E+V   +A    +  
Subjt:  KEMQGRAEPKSRYDRYTPLTASLEQVLTAIQDTNLLKRLEKLRSDPDRRNRNKYCMFHEDHGHTTRECIQLRDEIETLIREGYLKEFVGAIEARGRYQQT

Query:  KARVEPIR
        K+    IR
Subjt:  KARVEPIR

XP_024041095.1 uncharacterized protein LOC112098853 [Citrus clementina]6.9e-2333.33Show/hide
Query:  VERYDDGVALTAVILGLQDERLLNSIGESQPRTYVEFMTRAQIYISAEELLKSKQEERESRGMSVSDRRREDKGKRHQAEGRGRSRPDHSSANGRGRPEA
        V+ YDDG+AL+ ++ GL+  +L  S+ +  P +Y E + RA+ Y +AEE  K++ +E   +G S   ++++D  +  +       RPD S    + RP  
Subjt:  VERYDDGVALTAVILGLQDERLLNSIGESQPRTYVEFMTRAQIYISAEELLKSKQEERESRGMSVSDRRREDKGKRHQAEGRGRSRPDHSSANGRGRPEA

Query:  KEMQGRAEPK--SRYDRYTPLTASLEQVLTAIQDTNLLKRLEKLRSDPDRRNRNKYCMFHEDHGHTTRECIQLRDEIETLIREGYLKEFVGAIEARGRYQ
        +       P+  S++  +T L    EQ+L  +++  L +    ++++P RRN NKYC FH+DHGH T EC +L+++IE+L+R+G L+E+V   E R + +
Subjt:  KEMQGRAEPK--SRYDRYTPLTASLEQVLTAIQDTNLLKRLEKLRSDPDRRNRNKYCMFHEDHGHTTRECIQLRDEIETLIREGYLKEFVGAIEARGRYQ

Query:  QTKA
        Q ++
Subjt:  QTKA

TrEMBL top hitse value%identityAlignment
A0A6J1CNT2 uncharacterized protein LOC1110128051.9e-2335.58Show/hide
Query:  VERYDDGVALTAVILGLQDERLLNSIGESQPRTYVEFMTRAQIYISAEELLKSKQEERESRGMSVSDRRREDKGKRHQAEGRGRSRPDHSSANGRGRPEA
        VE   D V+L A I G++DE L  S G+  P T+ E ++RAQ Y+SA E   SK+E    R    +D++RE  G + Q                  R E 
Subjt:  VERYDDGVALTAVILGLQDERLLNSIGESQPRTYVEFMTRAQIYISAEELLKSKQEERESRGMSVSDRRREDKGKRHQAEGRGRSRPDHSSANGRGRPEA

Query:  KEMQGRAEPKSRYDRYTPLTASLEQVLTAIQDTNLLKRLEKLRSDPDRRNRNKYCMFHEDHGHTTRECIQLRDEIETLIREGYLKEFVGAIEARGRYQQT
        ++   + +P  ++++YT  T  LEQVL  I++  LLK  E++ +   +R++ +YC+FH DHGH T++C  L++E+E LI  GYLKE+V   +A    +  
Subjt:  KEMQGRAEPKSRYDRYTPLTASLEQVLTAIQDTNLLKRLEKLRSDPDRRNRNKYCMFHEDHGHTTRECIQLRDEIETLIREGYLKEFVGAIEARGRYQQT

Query:  KARVEPIR
        K+    IR
Subjt:  KARVEPIR

A0A6J1D9W7 uncharacterized protein LOC1110187081.6e-2234.98Show/hide
Query:  VERYDDGVALTAVILGLQDERLLNSIGESQPRTYVEFMTRAQIYISAEELLKSKQEERESRGMSVSDRRREDKGKRHQAEGRGRSRPDHSSANGRGRPEA
        V    D  A+   + GL DE L   +GE  P T+ E + +A+  I  +ELL++K                   G+  +  GRGRS  D   A+ + + + 
Subjt:  VERYDDGVALTAVILGLQDERLLNSIGESQPRTYVEFMTRAQIYISAEELLKSKQEERESRGMSVSDRRREDKGKRHQAEGRGRSRPDHSSANGRGRPEA

Query:  KEMQGRAE--------PKSR-YDRYTPLTASLEQVLTAIQDT---NLLKRLEKLRSDPDRRNRNKYCMFHEDHGHTTRECIQLRDEIETLIREGYLKEFV
            GRAE         KSR Y+R+TP T  + ++LT I+++    LLKR EKLR  P+RR+++KYC FH +HGH T +C +L+ +IE LI++GY K+FV
Subjt:  KEMQGRAE--------PKSR-YDRYTPLTASLEQVLTAIQDT---NLLKRLEKLRSDPDRRNRNKYCMFHEDHGHTTRECIQLRDEIETLIREGYLKEFV

Query:  G---AIEARGRYQQTKARVEPIR
        G      A  + ++ ++R  P R
Subjt:  G---AIEARGRYQQTKARVEPIR

A0A6J1DDR5 uncharacterized protein LOC1110201152.8e-2234.76Show/hide
Query:  ILGLQDERLLNSIGESQPRTYVEFMTRAQIYISAEELLKSK---QEERESRGMSVSDRRREDKGKRHQAEGRGRSRPDH---SSANGRGRPEAKEMQGRA
        + GL DE L   +GE  P T+ E + +A+  I  +EL++ K    E++  +G +  D+ + D   + +      SR D+    S + R RP         
Subjt:  ILGLQDERLLNSIGESQPRTYVEFMTRAQIYISAEELLKSK---QEERESRGMSVSDRRREDKGKRHQAEGRGRSRPDH---SSANGRGRPEAKEMQGRA

Query:  EPKSRYDRYTPLTASLEQVLTAIQDT---NLLKRLEKLRSDPDRRNRNKYCMFHEDHGHTTRECIQLRDEIETLIREGYLKEFVG---AIEARGRYQQTK
             Y+RYTP T  + ++LT I+++    LLKR EKLR DP++RN++KYC+FH DHGH+T  C +L+ +IE LI++ Y K+FVG   +  A  + ++ +
Subjt:  EPKSRYDRYTPLTASLEQVLTAIQDT---NLLKRLEKLRSDPDRRNRNKYCMFHEDHGHTTRECIQLRDEIETLIREGYLKEFVG---AIEARGRYQQTK

Query:  ARVEPIRRWR
        +R+ P R+ R
Subjt:  ARVEPIRRWR

A0A6J1DWY0 uncharacterized protein LOC1110252934.6e-2536.06Show/hide
Query:  VERYDDGVALTAVILGLQDERLLNSIGESQPRTYVEFMTRAQIYISAEELLKSKQEERESRGMSVSDRRREDKGKRHQAEGRGRSRPDHSSANGRGRPEA
        VE   D V+L A + G++DE L  S G+  P T+ E ++RAQ Y+SA E   SK+E    R    +D +RE  G + Q                  R E 
Subjt:  VERYDDGVALTAVILGLQDERLLNSIGESQPRTYVEFMTRAQIYISAEELLKSKQEERESRGMSVSDRRREDKGKRHQAEGRGRSRPDHSSANGRGRPEA

Query:  KEMQGRAEPKSRYDRYTPLTASLEQVLTAIQDTNLLKRLEKLRSDPDRRNRNKYCMFHEDHGHTTRECIQLRDEIETLIREGYLKEFVGAIEARGRYQQT
        ++   + +P  ++++YTP T  +EQVL  I+D  LLK  E++++   +R++ +YC+FH DHGH T++C  L++E+E LIR GYLKE+V   +A    +  
Subjt:  KEMQGRAEPKSRYDRYTPLTASLEQVLTAIQDTNLLKRLEKLRSDPDRRNRNKYCMFHEDHGHTTRECIQLRDEIETLIREGYLKEFVGAIEARGRYQQT

Query:  KARVEPIR
        K+    IR
Subjt:  KARVEPIR

A0A6J1DYL6 uncharacterized protein LOC1110257851.6e-2234.62Show/hide
Query:  VERYDDGVALTAVILGLQDERLLNSIGESQPRTYVEFMTRAQIYISAEELLKSKQEERESRGMSVSDRRREDKGKRHQAEGRGRSRPDHSSANGRGRPEA
        +E   D V+L A + G++DE L  S G+  P T+ E ++RAQ Y+SA E   SK+E    R    +D++RE  G + Q                  R E 
Subjt:  VERYDDGVALTAVILGLQDERLLNSIGESQPRTYVEFMTRAQIYISAEELLKSKQEERESRGMSVSDRRREDKGKRHQAEGRGRSRPDHSSANGRGRPEA

Query:  KEMQGRAEPKSRYDRYTPLTASLEQVLTAIQDTNLLKRLEKLRSDPDRRNRNKYCMFHEDHGHTTRECIQLRDEIETLIREGYLKEFVGAIEARGRYQQT
        ++   + +P  ++++YTP T  LEQVL  I+D  LLK  E+++    +R++ +YC+FH DH H T++   L++E+E LIR GYL+E+V   +A    +  
Subjt:  KEMQGRAEPKSRYDRYTPLTASLEQVLTAIQDTNLLKRLEKLRSDPDRRNRNKYCMFHEDHGHTTRECIQLRDEIETLIREGYLKEFVGAIEARGRYQQT

Query:  KARVEPIR
        K+    IR
Subjt:  KARVEPIR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGGTAATTGGTTTATGGCAAGAGTGGAGAATCATAGGGTCACGCTCTTCCCGCTTCCTTACAAATTCACTGATTGGTCGTTACGTGGAGTGAGGAGCAAGTCCCT
AAGCAAAATTCGACCATCAACAGTTGGCGTCGTCTGTGGGGAAGGCGTTGACAAGCAAACGCTGTTGAAAAAGCTGAGCACAATGGAGAACGAGAATCAGCCGACCGCGG
GTGAGCCGAATCCTCTAATTCGGCTCCAGGCCCAAGATGTTGAAATTGCAGAGATGAAGGGGAGGATGAACGAGATGGGGCAGAACTTGACTGAAATCCTCACTCTGTTG
AAAAAGCCCGAACTTGCCCGGCACGAGGAAGAGCATCTGTGCAGAGACCCAAAAAAGGGTAAGGGGATAGCCAACGAGGAGGTGGGAGATTCGGAAAGTGTGACTAGCCG
GATGCCCCCGCCCGGGGACGACCGAGTCCAGAAGGAGGCCGGGCCAAGCCGTAAAAAGGTCCGCAGGAGTTCGCCGCTAACCCAGGCACCAGGTATGTATACAGAAAATA
ATGACAAGTTGGAGCCTCGGCCAAAGTCCGAGGCCGAGCAGGGTCGAAAGAGGTCCGGATGGCTGCAAGGGGAGGGTAGTTACCAAACCTCCCAAAAGAAAGCAGAAAAC
GAGGATATAGAAGTACGATGGGAAAAAGGATCCGAAACAACACCTAGATGCATACCAAACCTGGATGGACTTCCATGGGGCGAACGAGGCAACGAGGTGCCGGGCCTTTG
CACTCACACTCACAGGCTTAGCGAGGCAGTGGTTTGGGAAGGTCCCGCGAAGGTCAATAGGCTCGTTCAGAGAGTTGGCTCGGGTGTTTGTCACGCAGTGGAACGTTACG
ATGATGGAGTTGCTTTGACTGCTGTAATCTTAGGTTTGCAGGACGAAAGGCTACTCAATTCGATCGGAGAAAGCCAACCGCGGACGTACGTAGAATTTATGACTCGAGCC
CAAATATATATAAGCGCTGAGGAATTGCTGAAATCCAAGCAGGAAGAGAGAGAGAGTCGGGGGATGTCGGTATCGGACCGGCGCCGTGAGGACAAAGGAAAGAGGCACCA
GGCCGAGGGAAGGGGCCGGAGCCGACCTGATCACTCCTCGGCCAATGGCCGAGGCCGACCAGAAGCCAAGGAGATGCAAGGTCGAGCAGAGCCTAAGTCCAGGTACGACA
GGTATACACCACTGACAGCTTCGCTTGAACAGGTCCTGACCGCAATCCAGGACACCAATCTGCTGAAACGCCTGGAAAAGTTGAGATCGGATCCCGACAGGAGAAATCGA
AACAAATATTGCATGTTCCACGAAGATCACGGCCATACAACCCGAGAGTGCATCCAGTTACGAGATGAGATAGAGACCTTGATCCGGGAAGGTTACCTCAAGGAGTTCGT
TGGGGCGATAGAAGCAAGAGGCCGCTACCAGCAGACCAAGGCAAGGGTGGAGCCAATCCGCCGCTGGAGATTTGAACTATTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGTGGTAATTGGTTTATGGCAAGAGTGGAGAATCATAGGGTCACGCTCTTCCCGCTTCCTTACAAATTCACTGATTGGTCGTTACGTGGAGTGAGGAGCAAGTCCCT
AAGCAAAATTCGACCATCAACAGTTGGCGTCGTCTGTGGGGAAGGCGTTGACAAGCAAACGCTGTTGAAAAAGCTGAGCACAATGGAGAACGAGAATCAGCCGACCGCGG
GTGAGCCGAATCCTCTAATTCGGCTCCAGGCCCAAGATGTTGAAATTGCAGAGATGAAGGGGAGGATGAACGAGATGGGGCAGAACTTGACTGAAATCCTCACTCTGTTG
AAAAAGCCCGAACTTGCCCGGCACGAGGAAGAGCATCTGTGCAGAGACCCAAAAAAGGGTAAGGGGATAGCCAACGAGGAGGTGGGAGATTCGGAAAGTGTGACTAGCCG
GATGCCCCCGCCCGGGGACGACCGAGTCCAGAAGGAGGCCGGGCCAAGCCGTAAAAAGGTCCGCAGGAGTTCGCCGCTAACCCAGGCACCAGGTATGTATACAGAAAATA
ATGACAAGTTGGAGCCTCGGCCAAAGTCCGAGGCCGAGCAGGGTCGAAAGAGGTCCGGATGGCTGCAAGGGGAGGGTAGTTACCAAACCTCCCAAAAGAAAGCAGAAAAC
GAGGATATAGAAGTACGATGGGAAAAAGGATCCGAAACAACACCTAGATGCATACCAAACCTGGATGGACTTCCATGGGGCGAACGAGGCAACGAGGTGCCGGGCCTTTG
CACTCACACTCACAGGCTTAGCGAGGCAGTGGTTTGGGAAGGTCCCGCGAAGGTCAATAGGCTCGTTCAGAGAGTTGGCTCGGGTGTTTGTCACGCAGTGGAACGTTACG
ATGATGGAGTTGCTTTGACTGCTGTAATCTTAGGTTTGCAGGACGAAAGGCTACTCAATTCGATCGGAGAAAGCCAACCGCGGACGTACGTAGAATTTATGACTCGAGCC
CAAATATATATAAGCGCTGAGGAATTGCTGAAATCCAAGCAGGAAGAGAGAGAGAGTCGGGGGATGTCGGTATCGGACCGGCGCCGTGAGGACAAAGGAAAGAGGCACCA
GGCCGAGGGAAGGGGCCGGAGCCGACCTGATCACTCCTCGGCCAATGGCCGAGGCCGACCAGAAGCCAAGGAGATGCAAGGTCGAGCAGAGCCTAAGTCCAGGTACGACA
GGTATACACCACTGACAGCTTCGCTTGAACAGGTCCTGACCGCAATCCAGGACACCAATCTGCTGAAACGCCTGGAAAAGTTGAGATCGGATCCCGACAGGAGAAATCGA
AACAAATATTGCATGTTCCACGAAGATCACGGCCATACAACCCGAGAGTGCATCCAGTTACGAGATGAGATAGAGACCTTGATCCGGGAAGGTTACCTCAAGGAGTTCGT
TGGGGCGATAGAAGCAAGAGGCCGCTACCAGCAGACCAAGGCAAGGGTGGAGCCAATCCGCCGCTGGAGATTTGAACTATTTTAG
Protein sequenceShow/hide protein sequence
MSGNWFMARVENHRVTLFPLPYKFTDWSLRGVRSKSLSKIRPSTVGVVCGEGVDKQTLLKKLSTMENENQPTAGEPNPLIRLQAQDVEIAEMKGRMNEMGQNLTEILTLL
KKPELARHEEEHLCRDPKKGKGIANEEVGDSESVTSRMPPPGDDRVQKEAGPSRKKVRRSSPLTQAPGMYTENNDKLEPRPKSEAEQGRKRSGWLQGEGSYQTSQKKAEN
EDIEVRWEKGSETTPRCIPNLDGLPWGERGNEVPGLCTHTHRLSEAVVWEGPAKVNRLVQRVGSGVCHAVERYDDGVALTAVILGLQDERLLNSIGESQPRTYVEFMTRA
QIYISAEELLKSKQEERESRGMSVSDRRREDKGKRHQAEGRGRSRPDHSSANGRGRPEAKEMQGRAEPKSRYDRYTPLTASLEQVLTAIQDTNLLKRLEKLRSDPDRRNR
NKYCMFHEDHGHTTRECIQLRDEIETLIREGYLKEFVGAIEARGRYQQTKARVEPIRRWRFELF