; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0008111 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0008111
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr9:12502722..12503327
RNA-Seq ExpressionLag0008111
SyntenyLag0008111
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022146774.1 uncharacterized protein LOC111015901 [Momordica charantia]1.7e-3748.28Show/hide
Query:  MYSLHLDENSPRLEFTEKEATRVRHPHNDALVVALTIANAKVHRILIDGGSSADVLSTTAFDAMKLGSEHLKPSLTPLVGFGGEKVSPRGSVELPVTFGE
        +Y  ++ + S ++EF+E EAT V HPHNDALV+ L IANAKVHRIL+DGGSS D+ S TA+ AM LG E LK SLTPL+GFGGE++ P+G +ELP+TF  
Subjt:  MYSLHLDENSPRLEFTEKEATRVRHPHNDALVVALTIANAKVHRILIDGGSSADVLSTTAFDAMKLGSEHLKPSLTPLVGFGGEKVSPRGSVELPVTFGE

Query:  GLRT-----------------------------AVASTYHQVLKFPTEEGVGAVYGEQKTSRECYFMALRNIDR
          ++                             A+ STYHQ +KFPT  GVG + GEQ+ SRECY+ ++R  D+
Subjt:  GLRT-----------------------------AVASTYHQVLKFPTEEGVGAVYGEQKTSRECYFMALRNIDR

XP_022154102.1 uncharacterized protein LOC111021438 [Momordica charantia]7.7e-3546.55Show/hide
Query:  MYSLHLDENSPRLEFTEKEATRVRHPHNDALVVALTIANAKVHRILIDGGSSADVLSTTAFDAMKLGSEHLKPSLTPLVGFGGEKVSPRGSVELPVTFGE
        +Y  ++ + S ++EF++   T + HPHNDAL++ L IANAKVHRIL+DGGSSAD +S TA+ AM LG E LK SLTPL+GFGGE+V P G +ELPVTF  
Subjt:  MYSLHLDENSPRLEFTEKEATRVRHPHNDALVVALTIANAKVHRILIDGGSSADVLSTTAFDAMKLGSEHLKPSLTPLVGFGGEKVSPRGSVELPVTFGE

Query:  GLRT-----------------------------AVASTYHQVLKFPTEEGVGAVYGEQKTSRECYFMALRNIDR
        G ++                             A+ STYHQ +KFPT  GVG + GEQ+  RECY+  +   D+
Subjt:  GLRT-----------------------------AVASTYHQVLKFPTEEGVGAVYGEQKTSRECYFMALRNIDR

XP_022155186.1 uncharacterized protein LOC111022321 [Momordica charantia]1.6e-3548.28Show/hide
Query:  MYSLHLDENSPRLEFTEKEATRVRHPHNDALVVALTIANAKVHRILIDGGSSADVLSTTAFDAMKLGSEHLKPSLTPLVGFGGEKVSPRGSVELPVTFGE
        +Y  ++      +EF+E EAT + HPHNDALV+ L IAN KVHRIL+DGGSSAD++S TA+ AM LG + LK S  PLVGFGGE+V   G +ELPVTFG 
Subjt:  MYSLHLDENSPRLEFTEKEATRVRHPHNDALVVALTIANAKVHRILIDGGSSADVLSTTAFDAMKLGSEHLKPSLTPLVGFGGEKVSPRGSVELPVTFGE

Query:  GLRT-----------------------------AVASTYHQVLKFPTEEGVGAVYGEQKTSRECYFMALRNIDR
        G ++                             A+ STYHQ  KFPT  GVG + GEQ+ SRECY  ++R+ DR
Subjt:  GLRT-----------------------------AVASTYHQVLKFPTEEGVGAVYGEQKTSRECYFMALRNIDR

XP_022155873.1 uncharacterized protein LOC111022886 [Momordica charantia]3.8e-3447.34Show/hide
Query:  LDENSPRLEFTEKEATRVRHPHNDALVVALTIANAKVHRILIDGGSSADVLSTTAFDAMKLGSEHLKPSLTPLVGFGGEKVSPRGSVELPVTFGEGLRT-
        ++E   +LEF+E EAT + HPHNDALV+ L IANAKVHRIL+DGGSS  ++S TA+ AM LG + LK S  PLVGFGGE+V P G +ELPV FG G ++ 
Subjt:  LDENSPRLEFTEKEATRVRHPHNDALVVALTIANAKVHRILIDGGSSADVLSTTAFDAMKLGSEHLKPSLTPLVGFGGEKVSPRGSVELPVTFGEGLRT-

Query:  ----------------------------AVASTYHQVLKFPTEEGVGAVYGEQKTSRECYFMALRNIDR
                                     + STYHQ +KFPT  G+G + GEQ+  RECY  +++  DR
Subjt:  ----------------------------AVASTYHQVLKFPTEEGVGAVYGEQKTSRECYFMALRNIDR

XP_022158687.1 uncharacterized protein LOC111025147 [Momordica charantia]5.9e-3546.55Show/hide
Query:  MYSLHLDENSPRLEFTEKEATRVRHPHNDALVVALTIANAKVHRILIDGGSSADVLSTTAFDAMKLGSEHLKPSLTPLVGFGGEKVSPRGSVELPVTFGE
        +Y  ++ + S  +EF+E EAT + HPHNDALV+ L IAN KVHRIL+DGGSSAD++S T +  M LG + LK S  PL+GFG E+V P G +EL VTFG 
Subjt:  MYSLHLDENSPRLEFTEKEATRVRHPHNDALVVALTIANAKVHRILIDGGSSADVLSTTAFDAMKLGSEHLKPSLTPLVGFGGEKVSPRGSVELPVTFGE

Query:  GLRT-----------------------------AVASTYHQVLKFPTEEGVGAVYGEQKTSRECYFMALRNIDR
        G ++                             A+ STYHQ +KFPT  GVG + GEQ+ SRECY+ ++R  DR
Subjt:  GLRT-----------------------------AVASTYHQVLKFPTEEGVGAVYGEQKTSRECYFMALRNIDR

TrEMBL top hitse value%identityAlignment
A0A6J1CZ14 uncharacterized protein LOC1110159018.1e-3848.28Show/hide
Query:  MYSLHLDENSPRLEFTEKEATRVRHPHNDALVVALTIANAKVHRILIDGGSSADVLSTTAFDAMKLGSEHLKPSLTPLVGFGGEKVSPRGSVELPVTFGE
        +Y  ++ + S ++EF+E EAT V HPHNDALV+ L IANAKVHRIL+DGGSS D+ S TA+ AM LG E LK SLTPL+GFGGE++ P+G +ELP+TF  
Subjt:  MYSLHLDENSPRLEFTEKEATRVRHPHNDALVVALTIANAKVHRILIDGGSSADVLSTTAFDAMKLGSEHLKPSLTPLVGFGGEKVSPRGSVELPVTFGE

Query:  GLRT-----------------------------AVASTYHQVLKFPTEEGVGAVYGEQKTSRECYFMALRNIDR
          ++                             A+ STYHQ +KFPT  GVG + GEQ+ SRECY+ ++R  D+
Subjt:  GLRT-----------------------------AVASTYHQVLKFPTEEGVGAVYGEQKTSRECYFMALRNIDR

A0A6J1DKR9 uncharacterized protein LOC1110214383.8e-3546.55Show/hide
Query:  MYSLHLDENSPRLEFTEKEATRVRHPHNDALVVALTIANAKVHRILIDGGSSADVLSTTAFDAMKLGSEHLKPSLTPLVGFGGEKVSPRGSVELPVTFGE
        +Y  ++ + S ++EF++   T + HPHNDAL++ L IANAKVHRIL+DGGSSAD +S TA+ AM LG E LK SLTPL+GFGGE+V P G +ELPVTF  
Subjt:  MYSLHLDENSPRLEFTEKEATRVRHPHNDALVVALTIANAKVHRILIDGGSSADVLSTTAFDAMKLGSEHLKPSLTPLVGFGGEKVSPRGSVELPVTFGE

Query:  GLRT-----------------------------AVASTYHQVLKFPTEEGVGAVYGEQKTSRECYFMALRNIDR
        G ++                             A+ STYHQ +KFPT  GVG + GEQ+  RECY+  +   D+
Subjt:  GLRT-----------------------------AVASTYHQVLKFPTEEGVGAVYGEQKTSRECYFMALRNIDR

A0A6J1DP33 uncharacterized protein LOC1110228861.9e-3447.34Show/hide
Query:  LDENSPRLEFTEKEATRVRHPHNDALVVALTIANAKVHRILIDGGSSADVLSTTAFDAMKLGSEHLKPSLTPLVGFGGEKVSPRGSVELPVTFGEGLRT-
        ++E   +LEF+E EAT + HPHNDALV+ L IANAKVHRIL+DGGSS  ++S TA+ AM LG + LK S  PLVGFGGE+V P G +ELPV FG G ++ 
Subjt:  LDENSPRLEFTEKEATRVRHPHNDALVVALTIANAKVHRILIDGGSSADVLSTTAFDAMKLGSEHLKPSLTPLVGFGGEKVSPRGSVELPVTFGEGLRT-

Query:  ----------------------------AVASTYHQVLKFPTEEGVGAVYGEQKTSRECYFMALRNIDR
                                     + STYHQ +KFPT  G+G + GEQ+  RECY  +++  DR
Subjt:  ----------------------------AVASTYHQVLKFPTEEGVGAVYGEQKTSRECYFMALRNIDR

A0A6J1DQY2 uncharacterized protein LOC1110223217.6e-3648.28Show/hide
Query:  MYSLHLDENSPRLEFTEKEATRVRHPHNDALVVALTIANAKVHRILIDGGSSADVLSTTAFDAMKLGSEHLKPSLTPLVGFGGEKVSPRGSVELPVTFGE
        +Y  ++      +EF+E EAT + HPHNDALV+ L IAN KVHRIL+DGGSSAD++S TA+ AM LG + LK S  PLVGFGGE+V   G +ELPVTFG 
Subjt:  MYSLHLDENSPRLEFTEKEATRVRHPHNDALVVALTIANAKVHRILIDGGSSADVLSTTAFDAMKLGSEHLKPSLTPLVGFGGEKVSPRGSVELPVTFGE

Query:  GLRT-----------------------------AVASTYHQVLKFPTEEGVGAVYGEQKTSRECYFMALRNIDR
        G ++                             A+ STYHQ  KFPT  GVG + GEQ+ SRECY  ++R+ DR
Subjt:  GLRT-----------------------------AVASTYHQVLKFPTEEGVGAVYGEQKTSRECYFMALRNIDR

A0A6J1DXV4 uncharacterized protein LOC1110251472.9e-3546.55Show/hide
Query:  MYSLHLDENSPRLEFTEKEATRVRHPHNDALVVALTIANAKVHRILIDGGSSADVLSTTAFDAMKLGSEHLKPSLTPLVGFGGEKVSPRGSVELPVTFGE
        +Y  ++ + S  +EF+E EAT + HPHNDALV+ L IAN KVHRIL+DGGSSAD++S T +  M LG + LK S  PL+GFG E+V P G +EL VTFG 
Subjt:  MYSLHLDENSPRLEFTEKEATRVRHPHNDALVVALTIANAKVHRILIDGGSSADVLSTTAFDAMKLGSEHLKPSLTPLVGFGGEKVSPRGSVELPVTFGE

Query:  GLRT-----------------------------AVASTYHQVLKFPTEEGVGAVYGEQKTSRECYFMALRNIDR
        G ++                             A+ STYHQ +KFPT  GVG + GEQ+ SRECY+ ++R  DR
Subjt:  GLRT-----------------------------AVASTYHQVLKFPTEEGVGAVYGEQKTSRECYFMALRNIDR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTACTCACTCCATCTTGATGAAAACTCACCAAGGTTAGAGTTTACAGAAAAGGAGGCCACAAGAGTACGTCATCCACACAACGACGCGCTGGTGGTCGCTCTAACGAT
TGCCAACGCAAAGGTCCACCGAATCCTCATTGATGGGGGGAGTTCCGCTGATGTGCTCTCAACCACTGCGTTCGACGCCATGAAACTGGGAAGTGAACACCTAAAACCGA
GCCTTACGCCGTTGGTGGGTTTCGGTGGAGAAAAAGTAAGCCCGAGAGGGAGCGTCGAGTTACCAGTGACGTTTGGAGAGGGGTTGCGGACAGCCGTAGCCTCAACCTAC
CACCAAGTCTTGAAATTCCCAACTGAAGAAGGCGTTGGAGCGGTGTACGGCGAGCAGAAAACGTCGAGGGAATGCTACTTCATGGCCCTCAGAAACATTGACAGAAAAAT
TCAGGCGACGTCAGCCCCGGGATATGGGCGAGGCCGAGCAGTTGAGGGGGCAAGTCTTCCCCTTCCAATGGAGCATTAG
mRNA sequenceShow/hide mRNA sequence
ATGTACTCACTCCATCTTGATGAAAACTCACCAAGGTTAGAGTTTACAGAAAAGGAGGCCACAAGAGTACGTCATCCACACAACGACGCGCTGGTGGTCGCTCTAACGAT
TGCCAACGCAAAGGTCCACCGAATCCTCATTGATGGGGGGAGTTCCGCTGATGTGCTCTCAACCACTGCGTTCGACGCCATGAAACTGGGAAGTGAACACCTAAAACCGA
GCCTTACGCCGTTGGTGGGTTTCGGTGGAGAAAAAGTAAGCCCGAGAGGGAGCGTCGAGTTACCAGTGACGTTTGGAGAGGGGTTGCGGACAGCCGTAGCCTCAACCTAC
CACCAAGTCTTGAAATTCCCAACTGAAGAAGGCGTTGGAGCGGTGTACGGCGAGCAGAAAACGTCGAGGGAATGCTACTTCATGGCCCTCAGAAACATTGACAGAAAAAT
TCAGGCGACGTCAGCCCCGGGATATGGGCGAGGCCGAGCAGTTGAGGGGGCAAGTCTTCCCCTTCCAATGGAGCATTAG
Protein sequenceShow/hide protein sequence
MYSLHLDENSPRLEFTEKEATRVRHPHNDALVVALTIANAKVHRILIDGGSSADVLSTTAFDAMKLGSEHLKPSLTPLVGFGGEKVSPRGSVELPVTFGEGLRTAVASTY
HQVLKFPTEEGVGAVYGEQKTSRECYFMALRNIDRKIQATSAPGYGRGRAVEGASLPLPMEH