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Lag0008116 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0008116
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr9:12576058..12576450
RNA-Seq ExpressionLag0008116
SyntenyLag0008116
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN65684.1 hypothetical protein Csa_019689 [Cucumis sativus]4.1e-2047.2Show/hide
Query:  MTDYLRVMKNHADNLGQAGSPVTNQALVSQVLLVLDEEFNPVVAMIQGRVGISWSEMQVELLVFEKRLELQNNLKSSLTLTHGASVNMVNNKDNGIQRTQ
        M DYLR+MK +ADNLGQA SP+  +AL+SQVLL LDE +NPV+ +IQG+  ISW +MQ +LL+FEKRL+ QN+ K+   +   A++NM  +++N   R  
Subjt:  MTDYLRVMKNHADNLGQAGSPVTNQALVSQVLLVLDEEFNPVVAMIQGRVGISWSEMQVELLVFEKRLELQNNLKSSLTLTHGASVNMVNNKDNGIQRTQ

Query:  SN--LYNNRQNGFRRGNQRGGGGHT
         N   + N +N F+    RGG  ++
Subjt:  SN--LYNNRQNGFRRGNQRGGGGHT

TYK05754.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]2.0e-1945.95Show/hide
Query:  DYLRVMKNHADNLGQAGSPVTNQALVSQVLLVLDEEFNPVVAMIQGRVGISWSEMQVELLVFEKRLELQNNLKSSLTLTHGASVNMVNNKDNGIQRTQSN
        DYLR+MK ++D LGQAGSPV  +A +SQ LL LDE +NPV+A+IQG+  ISW +MQ ELL FEKRLE Q+  K++  +     VN+  N+++   R  SN
Subjt:  DYLRVMKNHADNLGQAGSPVTNQALVSQVLLVLDEEFNPVVAMIQGRVGISWSEMQVELLVFEKRLELQNNLKSSLTLTHGASVNMVNNKDNGIQRTQSN

Query:  LY---NNRQN------GFRRGNQRGGG-------------GHTALMCY
             NNR N      GF  G  RG G             GH+AL+CY
Subjt:  LY---NNRQN------GFRRGNQRGGG-------------GHTALMCY

XP_022151683.1 uncharacterized protein LOC111019598 [Momordica charantia]4.5e-1949.19Show/hide
Query:  MTDYLRVMKNHADNLGQAGSPVTNQALVSQVLLVLDEEFNPVVAMIQGRVGISWSEMQVELLVFEKRLELQNNLKSSLTL--THGASVNMVNNKDNGIQR
        M +YL++MK+HADNL  AGS V+ + LVSQVL  LDEE+NP+V  +QG+V +SWSEM  ELL +EKRLE QN+LKS + +  T   SVN V+ +      
Subjt:  MTDYLRVMKNHADNLGQAGSPVTNQALVSQVLLVLDEEFNPVVAMIQGRVGISWSEMQVELLVFEKRLELQNNLKSSLTL--THGASVNMVNNKDNGIQR

Query:  TQSNLYNNRQNGFRRGNQRGGGGH
         Q+N   N  N     N   GGG+
Subjt:  TQSNLYNNRQNGFRRGNQRGGGGH

XP_038905161.1 uncharacterized protein LOC120091275 isoform X1 [Benincasa hispida]9.1e-2051.61Show/hide
Query:  MTDYLRVMKNHADNLGQAGSPVTNQALVSQVLLVLDEEFNPVVAMIQGRVGISWSEMQVELLVFEKRLELQNNLKSSLTLTH--GASVNMVNNKDNGIQR
        M +YL+ MK + DNL QAGSP+  + LVSQVLL LDEE+N +VAMIQGRV +SW +MQ ELL++E+RLE Q+N K+++       ASVNM N +      
Subjt:  MTDYLRVMKNHADNLGQAGSPVTNQALVSQVLLVLDEEFNPVVAMIQGRVGISWSEMQVELLVFEKRLELQNNLKSSLTLTH--GASVNMVNNKDNGIQR

Query:  TQSNLYNNRQNGFRRGNQRGGGGH
           N   N  N    G QRGGGGH
Subjt:  TQSNLYNNRQNGFRRGNQRGGGGH

XP_038905164.1 uncharacterized protein LOC120091275 isoform X4 [Benincasa hispida]9.1e-2051.61Show/hide
Query:  MTDYLRVMKNHADNLGQAGSPVTNQALVSQVLLVLDEEFNPVVAMIQGRVGISWSEMQVELLVFEKRLELQNNLKSSLTLTH--GASVNMVNNKDNGIQR
        M +YL+ MK + DNL QAGSP+  + LVSQVLL LDEE+N +VAMIQGRV +SW +MQ ELL++E+RLE Q+N K+++       ASVNM N +      
Subjt:  MTDYLRVMKNHADNLGQAGSPVTNQALVSQVLLVLDEEFNPVVAMIQGRVGISWSEMQVELLVFEKRLELQNNLKSSLTLTH--GASVNMVNNKDNGIQR

Query:  TQSNLYNNRQNGFRRGNQRGGGGH
           N   N  N    G QRGGGGH
Subjt:  TQSNLYNNRQNGFRRGNQRGGGGH

TrEMBL top hitse value%identityAlignment
A0A0A0LXB7 Uncharacterized protein2.0e-2047.2Show/hide
Query:  MTDYLRVMKNHADNLGQAGSPVTNQALVSQVLLVLDEEFNPVVAMIQGRVGISWSEMQVELLVFEKRLELQNNLKSSLTLTHGASVNMVNNKDNGIQRTQ
        M DYLR+MK +ADNLGQA SP+  +AL+SQVLL LDE +NPV+ +IQG+  ISW +MQ +LL+FEKRL+ QN+ K+   +   A++NM  +++N   R  
Subjt:  MTDYLRVMKNHADNLGQAGSPVTNQALVSQVLLVLDEEFNPVVAMIQGRVGISWSEMQVELLVFEKRLELQNNLKSSLTLTHGASVNMVNNKDNGIQRTQ

Query:  SN--LYNNRQNGFRRGNQRGGGGHT
         N   + N +N F+    RGG  ++
Subjt:  SN--LYNNRQNGFRRGNQRGGGGHT

A0A5A7SIT7 Uncharacterized protein4.5e-1744.06Show/hide
Query:  MTDYLRVMKNHADNLGQAGSPVTNQALVSQVLLVLDEEFNPVVAMIQGRVGISWSEMQVELLVFEKRLELQNNLKSSL---TLTHGASVNMVNNKDNGIQ
        M +YL VMK + DNLGQ GSPV  +AL+SQVLL LDE +N V+ +IQG+  ISW +MQ +LL+FEK L+ QN  K       +T   ++NM        Q
Subjt:  MTDYLRVMKNHADNLGQAGSPVTNQALVSQVLLVLDEEFNPVVAMIQGRVGISWSEMQVELLVFEKRLELQNNLKSSL---TLTHGASVNMVNNKDNGIQ

Query:  RTQSNL----YNNRQNGFRRGNQRGGG--------GHTALMCY
        R  SN     YN +    +RGN   G         GH+AL+CY
Subjt:  RTQSNL----YNNRQNGFRRGNQRGGG--------GHTALMCY

A0A5D3C373 Retrovirus-related Pol polyprotein from transposon TNT 1-949.8e-2045.95Show/hide
Query:  DYLRVMKNHADNLGQAGSPVTNQALVSQVLLVLDEEFNPVVAMIQGRVGISWSEMQVELLVFEKRLELQNNLKSSLTLTHGASVNMVNNKDNGIQRTQSN
        DYLR+MK ++D LGQAGSPV  +A +SQ LL LDE +NPV+A+IQG+  ISW +MQ ELL FEKRLE Q+  K++  +     VN+  N+++   R  SN
Subjt:  DYLRVMKNHADNLGQAGSPVTNQALVSQVLLVLDEEFNPVVAMIQGRVGISWSEMQVELLVFEKRLELQNNLKSSLTLTHGASVNMVNNKDNGIQRTQSN

Query:  LY---NNRQN------GFRRGNQRGGG-------------GHTALMCY
             NNR N      GF  G  RG G             GH+AL+CY
Subjt:  LY---NNRQN------GFRRGNQRGGG-------------GHTALMCY

A0A6J1D5J0 uncharacterized protein LOC1110175017.8e-1776.67Show/hide
Query:  MTDYLRVMKNHADNLGQAGSPVTNQALVSQVLLVLDEEFNPVVAMIQGRVGISWSEMQVE
        MTD+LRVMK+HADNLGQAGSPV  ++L+SQVLL LDEE+NPVVA IQG+ GISW EMQ E
Subjt:  MTDYLRVMKNHADNLGQAGSPVTNQALVSQVLLVLDEEFNPVVAMIQGRVGISWSEMQVE

A0A6J1DCW4 uncharacterized protein LOC1110195982.2e-1949.19Show/hide
Query:  MTDYLRVMKNHADNLGQAGSPVTNQALVSQVLLVLDEEFNPVVAMIQGRVGISWSEMQVELLVFEKRLELQNNLKSSLTL--THGASVNMVNNKDNGIQR
        M +YL++MK+HADNL  AGS V+ + LVSQVL  LDEE+NP+V  +QG+V +SWSEM  ELL +EKRLE QN+LKS + +  T   SVN V+ +      
Subjt:  MTDYLRVMKNHADNLGQAGSPVTNQALVSQVLLVLDEEFNPVVAMIQGRVGISWSEMQVELLVFEKRLELQNNLKSSLTL--THGASVNMVNNKDNGIQR

Query:  TQSNLYNNRQNGFRRGNQRGGGGH
         Q+N   N  N     N   GGG+
Subjt:  TQSNLYNNRQNGFRRGNQRGGGGH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCGACTACTTACGTGTGATGAAAAATCATGCAGACAACTTGGGACAAGCTGGGAGTCCGGTGACAAATCAAGCGTTGGTCTCACAAGTTCTTCTTGTGTTAGATGA
AGAATTCAACCCTGTCGTTGCAATGATCCAAGGGAGAGTGGGTATATCGTGGTCTGAGATGCAGGTCGAGCTCTTAGTGTTCGAAAAAAGACTGGAACTACAAAACAACC
TCAAAAGCTCCCTCACTCTCACTCATGGAGCATCCGTGAATATGGTCAACAACAAGGATAATGGCATTCAGCGGACTCAATCCAACTTGTACAACAATAGACAAAATGGT
TTTAGGCGGGGAAACCAAAGAGGTGGAGGTGGACATACTGCCCTTATGTGTTATAAGCTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGACCGACTACTTACGTGTGATGAAAAATCATGCAGACAACTTGGGACAAGCTGGGAGTCCGGTGACAAATCAAGCGTTGGTCTCACAAGTTCTTCTTGTGTTAGATGA
AGAATTCAACCCTGTCGTTGCAATGATCCAAGGGAGAGTGGGTATATCGTGGTCTGAGATGCAGGTCGAGCTCTTAGTGTTCGAAAAAAGACTGGAACTACAAAACAACC
TCAAAAGCTCCCTCACTCTCACTCATGGAGCATCCGTGAATATGGTCAACAACAAGGATAATGGCATTCAGCGGACTCAATCCAACTTGTACAACAATAGACAAAATGGT
TTTAGGCGGGGAAACCAAAGAGGTGGAGGTGGACATACTGCCCTTATGTGTTATAAGCTGTAA
Protein sequenceShow/hide protein sequence
MTDYLRVMKNHADNLGQAGSPVTNQALVSQVLLVLDEEFNPVVAMIQGRVGISWSEMQVELLVFEKRLELQNNLKSSLTLTHGASVNMVNNKDNGIQRTQSNLYNNRQNG
FRRGNQRGGGGHTALMCYKL