| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0026033.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 4.6e-55 | 81.06 | Show/hide |
Query: EADNVVITKNSDFVGSVMYLMNYTRPDIAYAVSRLSRYTHNPDKNHWVALRRLLRYLKGTIDYCLQFTKFPTVLEGYCDANWVIDNDEVSSTSGYVFIFC
+ D+V + + +GSVMYLMNYTRPDIAYAVSRLSRYTHNP++ HW ALRRLLRYLKGTIDYCL F KFPT+LEGYCDANWVIDNDEV+ST GYVF+
Subjt: EADNVVITKNSDFVGSVMYLMNYTRPDIAYAVSRLSRYTHNPDKNHWVALRRLLRYLKGTIDYCLQFTKFPTVLEGYCDANWVIDNDEVSSTSGYVFIFC
Query: GGAISWKSAKQTCIARSTMESEFIALELAGQE
GGAISWKS KQTCIARSTMESEFIALELAGQE
Subjt: GGAISWKSAKQTCIARSTMESEFIALELAGQE
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| KAA0048276.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 6.0e-55 | 80.6 | Show/hide |
Query: EADNVVITKNSDFVGSVMYLMNYTRPDIAYAVSRLSRYTHNPDKNHWVALRRLLRYLKGTIDYCLQFTKFPTVLEGYCDANWVIDNDEVSSTSGYVFIFC
+ D+V + + +GSVMYLMNYTRPDIAYAVSRLSRYTHNP++ HW ALR LLRYLKGTIDYCL F KFP VLEGYCDANWVIDNDEV+STSGYVF+
Subjt: EADNVVITKNSDFVGSVMYLMNYTRPDIAYAVSRLSRYTHNPDKNHWVALRRLLRYLKGTIDYCLQFTKFPTVLEGYCDANWVIDNDEVSSTSGYVFIFC
Query: GGAISWKSAKQTCIARSTMESEFIALELAGQEAE
GGAISWKS KQTCIAR TMESEFIALELAGQEAE
Subjt: GGAISWKSAKQTCIARSTMESEFIALELAGQEAE
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| KAA0055836.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 4.6e-55 | 80.6 | Show/hide |
Query: EADNVVITKNSDFVGSVMYLMNYTRPDIAYAVSRLSRYTHNPDKNHWVALRRLLRYLKGTIDYCLQFTKFPTVLEGYCDANWVIDNDEVSSTSGYVFIFC
+ D+V + ++ +GSVMYLMNYTRPDIAYAVSRLSRYTHNP++ HW ALR LLRYLKGTIDYCL F KFP VLEGYCDANWV DNDEV+STSGYVF+
Subjt: EADNVVITKNSDFVGSVMYLMNYTRPDIAYAVSRLSRYTHNPDKNHWVALRRLLRYLKGTIDYCLQFTKFPTVLEGYCDANWVIDNDEVSSTSGYVFIFC
Query: GGAISWKSAKQTCIARSTMESEFIALELAGQEAE
GGAISWKS KQTCIARSTMESEFIALELAGQEAE
Subjt: GGAISWKSAKQTCIARSTMESEFIALELAGQEAE
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| KAA0066784.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 6.0e-55 | 80.6 | Show/hide |
Query: EADNVVITKNSDFVGSVMYLMNYTRPDIAYAVSRLSRYTHNPDKNHWVALRRLLRYLKGTIDYCLQFTKFPTVLEGYCDANWVIDNDEVSSTSGYVFIFC
+ D+V + + +GSVMYLMNYTRPDIAYAVSRLSRYTHNP++ HW ALR LLRYLKGTIDYCL F KFP VLEGYCDANWV DNDEV+STSGYVF+
Subjt: EADNVVITKNSDFVGSVMYLMNYTRPDIAYAVSRLSRYTHNPDKNHWVALRRLLRYLKGTIDYCLQFTKFPTVLEGYCDANWVIDNDEVSSTSGYVFIFC
Query: GGAISWKSAKQTCIARSTMESEFIALELAGQEAE
GGAISWKS KQTCIARSTMESEFIALELAGQEAE
Subjt: GGAISWKSAKQTCIARSTMESEFIALELAGQEAE
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| TYK07981.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 6.0e-55 | 80.6 | Show/hide |
Query: EADNVVITKNSDFVGSVMYLMNYTRPDIAYAVSRLSRYTHNPDKNHWVALRRLLRYLKGTIDYCLQFTKFPTVLEGYCDANWVIDNDEVSSTSGYVFIFC
+ D+V + + +GSVMYLMNYTRPDIAYAVSRLSRYTHNP++ HW ALR LLRYLKGTIDYCL F KFP VLEGYCDANWV DNDEV+STSGYVF+
Subjt: EADNVVITKNSDFVGSVMYLMNYTRPDIAYAVSRLSRYTHNPDKNHWVALRRLLRYLKGTIDYCLQFTKFPTVLEGYCDANWVIDNDEVSSTSGYVFIFC
Query: GGAISWKSAKQTCIARSTMESEFIALELAGQEAE
GGAISWKS KQTCIARSTMESEFIALELAGQEAE
Subjt: GGAISWKSAKQTCIARSTMESEFIALELAGQEAE
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SN16 Ty1-copia retrotransposon protein | 2.2e-55 | 81.06 | Show/hide |
Query: EADNVVITKNSDFVGSVMYLMNYTRPDIAYAVSRLSRYTHNPDKNHWVALRRLLRYLKGTIDYCLQFTKFPTVLEGYCDANWVIDNDEVSSTSGYVFIFC
+ D+V + + +GSVMYLMNYTRPDIAYAVSRLSRYTHNP++ HW ALRRLLRYLKGTIDYCL F KFPT+LEGYCDANWVIDNDEV+ST GYVF+
Subjt: EADNVVITKNSDFVGSVMYLMNYTRPDIAYAVSRLSRYTHNPDKNHWVALRRLLRYLKGTIDYCLQFTKFPTVLEGYCDANWVIDNDEVSSTSGYVFIFC
Query: GGAISWKSAKQTCIARSTMESEFIALELAGQE
GGAISWKS KQTCIARSTMESEFIALELAGQE
Subjt: GGAISWKSAKQTCIARSTMESEFIALELAGQE
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| A0A5A7U7W6 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.9e-55 | 80.6 | Show/hide |
Query: EADNVVITKNSDFVGSVMYLMNYTRPDIAYAVSRLSRYTHNPDKNHWVALRRLLRYLKGTIDYCLQFTKFPTVLEGYCDANWVIDNDEVSSTSGYVFIFC
+ D+V + + +GSVMYLMNYTRPDIAYAVSRLSRYTHNPD+ HW LR LLRYLKGTIDYCL F KFP VLEGYCDANWV DNDEV+STSGYVF+
Subjt: EADNVVITKNSDFVGSVMYLMNYTRPDIAYAVSRLSRYTHNPDKNHWVALRRLLRYLKGTIDYCLQFTKFPTVLEGYCDANWVIDNDEVSSTSGYVFIFC
Query: GGAISWKSAKQTCIARSTMESEFIALELAGQEAE
GGAISWKS KQTCIARSTMESEFIALELAGQEAE
Subjt: GGAISWKSAKQTCIARSTMESEFIALELAGQEAE
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| A0A5A7UNH1 Ty1-copia retrotransposon protein | 2.2e-55 | 80.6 | Show/hide |
Query: EADNVVITKNSDFVGSVMYLMNYTRPDIAYAVSRLSRYTHNPDKNHWVALRRLLRYLKGTIDYCLQFTKFPTVLEGYCDANWVIDNDEVSSTSGYVFIFC
+ D+V + ++ +GSVMYLMNYTRPDIAYAVSRLSRYTHNP++ HW ALR LLRYLKGTIDYCL F KFP VLEGYCDANWV DNDEV+STSGYVF+
Subjt: EADNVVITKNSDFVGSVMYLMNYTRPDIAYAVSRLSRYTHNPDKNHWVALRRLLRYLKGTIDYCLQFTKFPTVLEGYCDANWVIDNDEVSSTSGYVFIFC
Query: GGAISWKSAKQTCIARSTMESEFIALELAGQEAE
GGAISWKS KQTCIARSTMESEFIALELAGQEAE
Subjt: GGAISWKSAKQTCIARSTMESEFIALELAGQEAE
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| A0A5A7VHG8 Ty1-copia retrotransposon protein | 2.9e-55 | 80.6 | Show/hide |
Query: EADNVVITKNSDFVGSVMYLMNYTRPDIAYAVSRLSRYTHNPDKNHWVALRRLLRYLKGTIDYCLQFTKFPTVLEGYCDANWVIDNDEVSSTSGYVFIFC
+ D+V + + +GSVMYLMNYTRPDIAYAVSRLSRYTHNP++ HW ALR LLRYLKGTIDYCL F KFP VLEGYCDANWV DNDEV+STSGYVF+
Subjt: EADNVVITKNSDFVGSVMYLMNYTRPDIAYAVSRLSRYTHNPDKNHWVALRRLLRYLKGTIDYCLQFTKFPTVLEGYCDANWVIDNDEVSSTSGYVFIFC
Query: GGAISWKSAKQTCIARSTMESEFIALELAGQEAE
GGAISWKS KQTCIARSTMESEFIALELAGQEAE
Subjt: GGAISWKSAKQTCIARSTMESEFIALELAGQEAE
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| A0A5D3C7Z8 Ty1-copia retrotransposon protein | 2.9e-55 | 80.6 | Show/hide |
Query: EADNVVITKNSDFVGSVMYLMNYTRPDIAYAVSRLSRYTHNPDKNHWVALRRLLRYLKGTIDYCLQFTKFPTVLEGYCDANWVIDNDEVSSTSGYVFIFC
+ D+V + + +GSVMYLMNYTRPDIAYAVSRLSRYTHNP++ HW ALR LLRYLKGTIDYCL F KFP VLEGYCDANWV DNDEV+STSGYVF+
Subjt: EADNVVITKNSDFVGSVMYLMNYTRPDIAYAVSRLSRYTHNPDKNHWVALRRLLRYLKGTIDYCLQFTKFPTVLEGYCDANWVIDNDEVSSTSGYVFIFC
Query: GGAISWKSAKQTCIARSTMESEFIALELAGQEAE
GGAISWKS KQTCIARSTMESEFIALELAGQEAE
Subjt: GGAISWKSAKQTCIARSTMESEFIALELAGQEAE
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 6.1e-18 | 37.66 | Show/hide |
Query: NLVSGSLLNRAGLRVVFEADNVVITKNSDFVGSVMYLMNYTRPDIAYAVSRLSRYTHNPDKNHWVALRRLLRYLKGTIDYCLQFTK---FPTVLEGYCDA
N VS L ++ ++ +D T +G +MY+M TRPD+ AV+ LSRY+ + W L+R+LRYLKGTID L F K F + GY D+
Subjt: NLVSGSLLNRAGLRVVFEADNVVITKNSDFVGSVMYLMNYTRPDIAYAVSRLSRYTHNPDKNHWVALRRLLRYLKGTIDYCLQFTK---FPTVLEGYCDA
Query: NWVIDNDEVSSTSGYVF-IFCGGAISWKSAKQTCIARSTMESEFIALELAGQEA
+W + ST+GY+F +F I W + +Q +A S+ E+E++AL A +EA
Subjt: NWVIDNDEVSSTSGYVF-IFCGGAISWKSAKQTCIARSTMESEFIALELAGQEA
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| P0CV72 Secreted RxLR effector protein 161 | 3.9e-25 | 50.41 | Show/hide |
Query: VGSVMYLMNYTRPDIAYAVSRLSRYTHNPDKNHWVALRRLLRYLKGTIDYCLQFTKFPTV-LEGYCDANWVIDNDEVSSTSGYVFIFCGGAISWKSAKQT
VG++MYLM TRPD+A AV LS++ +P HW AL+R+LRYL+ T Y L+FT+ T L GY DA+W D + STSGY+F GG +SW+S KQ
Subjt: VGSVMYLMNYTRPDIAYAVSRLSRYTHNPDKNHWVALRRLLRYLKGTIDYCLQFTKFPTV-LEGYCDANWVIDNDEVSSTSGYVFIFCGGAISWKSAKQT
Query: CIARSTMESEFIALELAGQEA
+A S+ E E++AL A QEA
Subjt: CIARSTMESEFIALELAGQEA
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.1e-27 | 48.51 | Show/hide |
Query: VFEADNVVITKNSDFVGSVMYLMNYTRPDIAYAVSRLSRYTHNPDKNHWVALRRLLRYLKGTIDYCLQFTKFPTVLEGYCDANWVIDNDEVSSTSGYVFI
V E N+ S VGS+MY M TRPDIA+AV +SR+ NP K HW A++ +LRYL+GT CL F +L+GY DA+ D D S++GY+F
Subjt: VFEADNVVITKNSDFVGSVMYLMNYTRPDIAYAVSRLSRYTHNPDKNHWVALRRLLRYLKGTIDYCLQFTKFPTVLEGYCDANWVIDNDEVSSTSGYVFI
Query: FCGGAISWKSAKQTCIARSTMESEFIALELAGQE
F GGAISW+S Q C+A ST E+E+IA G+E
Subjt: FCGGAISWKSAKQTCIARSTMESEFIALELAGQE
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 3.2e-19 | 41.41 | Show/hide |
Query: TKNSDFVGSVMYLMNYTRPDIAYAVSRLSRYTHNPDKNHWVALRRLLRYLKGTIDYCLQFTKFPTV-LEGYCDANWVIDNDEVSSTSGYVFIFCGGAISW
T+ VGS+ YL +TRPDI+YAV+RLS++ H P + H AL+R+LRYL GT ++ + K T+ L Y DA+W D D+ ST+GY+ ISW
Subjt: TKNSDFVGSVMYLMNYTRPDIAYAVSRLSRYTHNPDKNHWVALRRLLRYLKGTIDYCLQFTKFPTV-LEGYCDANWVIDNDEVSSTSGYVFIFCGGAISW
Query: KSAKQTCIARSTMESEFIALELAGQEAE
S KQ + RS+ E+E+ ++ E +
Subjt: KSAKQTCIARSTMESEFIALELAGQEAE
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 3.4e-21 | 42.97 | Show/hide |
Query: TKNSDFVGSVMYLMNYTRPDIAYAVSRLSRYTHNPDKNHWVALRRLLRYLKGTIDYCLQFTKFPTV-LEGYCDANWVIDNDEVSSTSGYVFIFCGGAISW
T+ VGS+ YL +TRPD++YAV+RLS+Y H P +HW AL+R+LRYL GT D+ + K T+ L Y DA+W D D+ ST+GY+ ISW
Subjt: TKNSDFVGSVMYLMNYTRPDIAYAVSRLSRYTHNPDKNHWVALRRLLRYLKGTIDYCLQFTKFPTV-LEGYCDANWVIDNDEVSSTSGYVFIFCGGAISW
Query: KSAKQTCIARSTMESEFIALELAGQEAE
S KQ + RS+ E+E+ ++ E +
Subjt: KSAKQTCIARSTMESEFIALELAGQEAE
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT2G13450.1 unknown protein | 2.5e-06 | 23.35 | Show/hide |
Query: LVGKVISNRLVNIDAFRRVMREAWDFCKEITIENSGENVFIINPHSERGKEKIVEDSPWCYDRNLIV---FRTPSTFDLPKEMVFDSALFWVQFHKVPIG
L+ + ++ R N+ A + AW + + SE ++ PW Y+ + + TF L S WVQ +P+
Subjt: LVGKVISNRLVNIDAFRRVMREAWDFCKEITIENSGENVFIINPHSERGKEKIVEDSPWCYDRNLIV---FRTPSTFDLPKEMVFDSALFWVQFHKVPIG
Query: LRNEETARILGNRIGEVQKVDTNERDECLGHYLRVRIKMQINEPLCRGLTINSGSTGKFWVEIKYER
EETA + + +GE+ +D ++ Y+RVRI+ I + L L I S + +YER
Subjt: LRNEETARILGNRIGEVQKVDTNERDECLGHYLRVRIKMQINEPLCRGLTINSGSTGKFWVEIKYER
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| AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | 1.6e-13 | 35.83 | Show/hide |
Query: VGSVMYLMNYTRPDIAYAVSRLSRYTHNPDKNHWVALRRLLRYLKGTIDYCLQFTKFPTV-LEGYCDANWVIDNDEVSSTSGYVFIFCGGAISWKSAKQT
+G +MYL TR DI++AV++LS+++ P H A+ ++L Y+KGT+ L ++ + L+ + DA++ D ST+GY ISWKS KQ
Subjt: VGSVMYLMNYTRPDIAYAVSRLSRYTHNPDKNHWVALRRLLRYLKGTIDYCLQFTKFPTV-LEGYCDANWVIDNDEVSSTSGYVFIFCGGAISWKSAKQT
Query: CIARSTMESEFIALELAGQE
+++S+ E+E+ AL A E
Subjt: CIARSTMESEFIALELAGQE
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| AT5G36228.1 nucleic acid binding;zinc ion binding | 5.8e-08 | 20.12 | Show/hide |
Query: LVGKVISNRLVNIDAFRRVMREAWDFCKEITIENSGENVFIINPHSERGKEKIVEDSPWCYDRNLIVFRTPSTFDLPKEMVFDSALFWVQFHKVPIGLRN
L+G++++ + +++ + W ++ + F + SE + +PW ++ I + D P E WV +P+ +
Subjt: LVGKVISNRLVNIDAFRRVMREAWDFCKEITIENSGENVFIINPHSERGKEKIVEDSPWCYDRNLIVFRTPSTFDLPKEMVFDSALFWVQFHKVPIGLRN
Query: EETARILGNRIGEVQKVDTNERDECLGHYLRVRIKMQINEPLCRGLTINSGSTGKFWVEIKYER
E T I+ + +GEV +D NE ++RV+++M EPL + S + + +YE+
Subjt: EETARILGNRIGEVQKVDTNERDECLGHYLRVRIKMQINEPLCRGLTINSGSTGKFWVEIKYER
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| ATMG00240.1 Gag-Pol-related retrotransposon family protein | 1.3e-04 | 31.65 | Show/hide |
Query: MYLMNYTRPDIAYAVSRLSRYTHNPDKNHWVALRRLLRYLKGTIDYCLQFTKFPTV-LEGYCDANWVIDNDEVSSTSGY
MYL TRPD+ +AV+RLS+++ A+ ++L Y+KGT+ L ++ + L+ + D++W D S +G+
Subjt: MYLMNYTRPDIAYAVSRLSRYTHNPDKNHWVALRRLLRYLKGTIDYCLQFTKFPTV-LEGYCDANWVIDNDEVSSTSGY
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| ATMG00810.1 DNA/RNA polymerases superfamily protein | 4.2e-14 | 36.51 | Show/hide |
Query: SDF---VGSVMYLMNYTRPDIAYAVSRLSRYTHNPDKNHWVALRRLLRYLKGTIDYCLQFTKFPTV-LEGYCDANWVIDNDEVSSTSGYVFIFCGGAISW
SDF VG++ YL TRPDI+YAV+ + + H P + L+R+LRY+KGTI + L K + ++ +CD++W ST+G+ ISW
Subjt: SDF---VGSVMYLMNYTRPDIAYAVSRLSRYTHNPDKNHWVALRRLLRYLKGTIDYCLQFTKFPTV-LEGYCDANWVIDNDEVSSTSGYVFIFCGGAISW
Query: KSAKQTCIARSTMESEFIALELAGQE
+ +Q ++RS+ E+E+ AL L E
Subjt: KSAKQTCIARSTMESEFIALELAGQE
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