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Lag0008126 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0008126
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr9:12760529..12762129
RNA-Seq ExpressionLag0008126
SyntenyLag0008126
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF5443010.1 hypothetical protein F2P56_035607 [Juglans regia]3.6e-1029.24Show/hide
Query:  MENFRQAIKDCHLKDMHSRGAKFTWHGNKRGPTFKRNWIDSSA-----TMGSIPYIRMLLFITLTGYFLTIGPLRSSWKLLARVRKGVALGIWGRDVFLR
        ME FR+A++DC L DM   G KFTW  N+ G  F +  +D +       + +   + +LL    + +       R+  +   R  K +    W + V  +
Subjt:  MENFRQAIKDCHLKDMHSRGAKFTWHGNKRGPTFKRNWIDSSA-----TMGSIPYIRMLLFITLTGYFLTIGPLRSSWKLLARVRKGVALGIWGRDVFLR

Query:  RKNRIKACKISLKEAYSNPQSLNFDEIHRIEFELDNLLEEEEINWKQRSLEEWLKWGDKNSKWFHRKASIR
         K  ++     L       Q    D I  ++ E++ +L+E+ + WKQR+ + WLK GD+N+K+FH+ AS R
Subjt:  RKNRIKACKISLKEAYSNPQSLNFDEIHRIEFELDNLLEEEEINWKQRSLEEWLKWGDKNSKWFHRKASIR

XP_006491472.1 uncharacterized protein LOC102626455 [Citrus sinensis]1.6e-1026.94Show/hide
Query:  MENFRQAIKDCHLKDMHSRGAKFTWHGNKRGPTFKRNWIDS-------SATMGSIPYIRMLLFIT-------------------------------LTGY
        M  F+++I+ C+L DM  +G KFTW   + G  +    +D         +T  ++P I +  +++                                + Y
Subjt:  MENFRQAIKDCHLKDMHSRGAKFTWHGNKRGPTFKRNWIDS-------SATMGSIPYIRMLLFIT-------------------------------LTGY

Query:  FLTIGPLRSSW-------------KLLARVRKGVA-LGIWGRDVFLRRKNRIKACKISLKEAYSNP-QSLNFDEIHRIEFELDNLLEEEEINWKQRSLEE
              +RS W             K     ++ +A L IW ++ F  RK +       LK     P Q+++ +EI ++E ++ N+L +EE+ WKQRS  +
Subjt:  FLTIGPLRSSW-------------KLLARVRKGVA-LGIWGRDVFLRRKNRIKACKISLKEAYSNP-QSLNFDEIHRIEFELDNLLEEEEINWKQRSLEE

Query:  WLKWGDKNSKWFHRKASIR
        WLK GDKN+K+FH KAS R
Subjt:  WLKWGDKNSKWFHRKASIR

XP_020412490.1 uncharacterized protein LOC18793550 [Prunus persica]1.2e-1032.73Show/hide
Query:  FRQAIKDCHLKDMHSRGAKFTWHGNKRGPTFKRNWIDSSATMGSIPYIRMLLFITLTGYFLTIGPLRSSWKLLARVR-KGVALGIWGRDVFLRRKNRIKA
        FR AI DCHL DM   GA FTW   + G   +R                             +    S  K + R++  G+ L  W R +F   K  I+ 
Subjt:  FRQAIKDCHLKDMHSRGAKFTWHGNKRGPTFKRNWIDSSATMGSIPYIRMLLFITLTGYFLTIGPLRSSWKLLARVR-KGVALGIWGRDVFLRRKNRIKA

Query:  CKISLKEAYSNPQSLNFD-EIHRIEFELDNLLEEEEINWKQRSLEEWLKWGDKNSKWFHRKASIR
         +  L   +  P S N     H +  +LD+LL  EE  WKQRS   WLK GD+N+++FH++AS R
Subjt:  CKISLKEAYSNPQSLNFD-EIHRIEFELDNLLEEEEINWKQRSLEEWLKWGDKNSKWFHRKASIR

XP_030483245.1 uncharacterized protein LOC115699840 [Cannabis sativa]1.6e-1026.99Show/hide
Query:  MENFRQAIKDCHLKDMHSRGAKFTWHGNKRGPTFKRNWID--------SSATMGSIPYIRMLLFITLTGYFLTIGPL-RSSWKLLAR---VRK----GVA
        ++ F   +++C L D+   G  +TW    RG +   NWI+        S + + S P  +++     T     I  L + +W+LL+R   + K    G  
Subjt:  MENFRQAIKDCHLKDMHSRGAKFTWHGNKRGPTFKRNWID--------SSATMGSIPYIRMLLFITLTGYFLTIGPL-RSSWKLLAR---VRK----GVA

Query:  LGIWGRDVFLRRKNRIKACKISLKEAYSNPQSLNFDEIHRIEFELDNLLEEEEINWKQRSLEEWLKWGDKNSKWFHRKASIRGAN---------------
        L +WG+D     K+RIK CK  ++   +   +++ +   + E  L  +L ++E+ W+QRS + WLK GD+NSK+FH  A+ R  N               
Subjt:  LGIWGRDVFLRRKNRIKACKISLKEAYSNPQSLNFDEIHRIEFELDNLLEEEEINWKQRSLEEWLKWGDKNSKWFHRKASIRGAN---------------

Query:  WANKLSSVSYSQMVPLYHTFYLRTTV
        W N LS++    MV  +++ +  +++
Subjt:  WANKLSSVSYSQMVPLYHTFYLRTTV

XP_042944517.1 uncharacterized protein LOC122278389 [Carya illinoinensis]6.5e-1231.14Show/hide
Query:  MENFRQAIKDCHLKDMHSRGAKFTWHGNKRGPTFKRNWIDSSATMGSIPYIRMLLFITLTGYFLTIGPLRSSWKLLARVRKGVALGIWGRDVFLRRKNRI
        M+ FR+A+ +C L D+   G+KFTW   + G  F +  +D +                              W L     +   +  W + +  R+K  +
Subjt:  MENFRQAIKDCHLKDMHSRGAKFTWHGNKRGPTFKRNWIDSSATMGSIPYIRMLLFITLTGYFLTIGPLRSSWKLLARVRKGVALGIWGRDVFLRRKNRI

Query:  KACKISLKEAY-SNPQSLNFDEIHRIEFELDNLLEEEEINWKQRSLEEWLKWGDKNSKWFHRKASIR
        +  +  L+E   +N   LN DEI R++ E+D+LL+EEE+ W+QRS + WLK GD+NSK+FH+ A+ R
Subjt:  KACKISLKEAY-SNPQSLNFDEIHRIEFELDNLLEEEEINWKQRSLEEWLKWGDKNSKWFHRKASIR

TrEMBL top hitse value%identityAlignment
A0A2I4E9H8 uncharacterized protein LOC1089875821.1e-0928.12Show/hide
Query:  MENFRQAIKDCHLKDMHSRGAKFTWHGNKRGPTFKRNWIDSSATMGS------------IPYIRM----LLFITLTGYFLTIGP-----LRSSWKLLA--
        ME FR+ I +C LK   +RG+KFTW  N+RG  F +  +D      S            +P +      LL    T   +  G        ++W L A  
Subjt:  MENFRQAIKDCHLKDMHSRGAKFTWHGNKRGPTFKRNWIDSSATMGS------------IPYIRM----LLFITLTGYFLTIGP-----LRSSWKLLA--

Query:  -----------------------RVRK-GVALGIWGRDVFLRRKNRIKACKISLKEAYSNPQSLNFDEIHRIEFELDNLLEEEEINWKQRSLEEWLKWGD
                               R++K  +AL  W     +R    I A    L+E   + Q    + I +++ EL+  L E+++ WKQR+ + WL+ GD
Subjt:  -----------------------RVRK-GVALGIWGRDVFLRRKNRIKACKISLKEAYSNPQSLNFDEIHRIEFELDNLLEEEEINWKQRSLEEWLKWGD

Query:  KNSKWFHRKASIRGANWANKLSSV
        KN+K+FH  A+ R     NK+S V
Subjt:  KNSKWFHRKASIRGANWANKLSSV

A0A2I4HAC4 uncharacterized protein LOC1090150831.1e-0931.11Show/hide
Query:  MENFRQAIKDCHLKDMHSRGAKFTWHGNKRGPTFKRNWIDSSATMGSIPYIRMLLFITLTGYFLTIGPLRS--------SWK-----LLARVRKGVALGI
        ME+F +A+ DC L D+  +G KFTW   + G  F +  +D +  +G+  +     F     Y + + P+ S        SW      L  R R       
Subjt:  MENFRQAIKDCHLKDMHSRGAKFTWHGNKRGPTFKRNWIDSSATMGSIPYIRMLLFITLTGYFLTIGPLRS--------SWK-----LLARVRKGVALGI

Query:  WG-RDVFLRRKNRIKACKISLKEAYSNPQSLNFDEIHRIEFELDNLLEEEEINWKQRSLEEWLKWGDKNSKWFHRKASIR
        W  R+    R+   K  ++   ++ +N  +L  +E+ RI+ ++D LL+EE+ +WKQR+  +WLK GD+NSK+FH+ A+ R
Subjt:  WG-RDVFLRRKNRIKACKISLKEAYSNPQSLNFDEIHRIEFELDNLLEEEEINWKQRSLEEWLKWGDKNSKWFHRKASIR

A0A2N9HRK6 Uncharacterized protein1.3e-1031.07Show/hide
Query:  MENFRQAIKDCHLKDMHSRGAKFTWHGNKRGPTFKRNWIDSSATMGSIPYIRMLLFITLTGYFLTIGPLRSSWKLLARVRKGVA----------LGIWGR
        M +FR A+ DC L D+  RG  FTW  N R P F   W+     + +I ++       +    +T    +  W ++   R   A          LG W R
Subjt:  MENFRQAIKDCHLKDMHSRGAKFTWHGNKRGPTFKRNWIDSSATMGSIPYIRMLLFITLTGYFLTIGPLRSSWKLLARVRKGVA----------LGIWGR

Query:  DVFLRRKNRIKACKISLKEAYS-NPQSLNFDEIHRIEFELDNLLEEEEINWKQRSLEEWLKWGDKNSKWFHRKASIR
        + F   K +I+  K  +++A + + Q    + I+ +  EL+ LL +EE  W+QRS   WL  GD+N+K+FH +AS R
Subjt:  DVFLRRKNRIKACKISLKEAYS-NPQSLNFDEIHRIEFELDNLLEEEEINWKQRSLEEWLKWGDKNSKWFHRKASIR

A0A6J1DY29 uncharacterized protein LOC1110252376.6e-1032.93Show/hide
Query:  FRQAIKDCHLKDMHSRGAKFTWHGNKRGPTFKRNWIDSSATMGSIPYIRMLLFITLTGYFLTIGPLRSSWKLLARVRKGVALGIWGRDVFLRRKNRIKAC
        FR  +  C L DM   G KFTW  N+         +D           R L   +    F     +   W        G+ L         R    ++  
Subjt:  FRQAIKDCHLKDMHSRGAKFTWHGNKRGPTFKRNWIDSSATMGSIPYIRMLLFITLTGYFLTIGPLRSSWKLLARVRKGVALGIWGRDVFLRRKNRIKAC

Query:  KISLK----EAYSNPQSLNFDEIHRIEFELDNLLEEEEINWKQRSLEEWLKWGDKNSKWFHRKASIR
        +  ++    E   +P  L+F  IH IE +L  LLE EEI WKQRS E+WLKWGD N KWFH+KA++R
Subjt:  KISLK----EAYSNPQSLNFDEIHRIEFELDNLLEEEEINWKQRSLEEWLKWGDKNSKWFHRKASIR

A0A803NIK1 Uncharacterized protein3.0e-1031.25Show/hide
Query:  MENFRQAIKDCHLKDMHSRGAKFTWHGNKRGPTFKRNWIDSSATMGSIPYIRMLLFITLTGYFLTIGPLRSSWKLLAR---VRKGVA----LGIWGRDVF
        +E F QA+ DC L DM   G  FTW    RG +   NW++       I      LF         +  +++ W  +     V+K  A    L  WG+D+ 
Subjt:  MENFRQAIKDCHLKDMHSRGAKFTWHGNKRGPTFKRNWIDSSATMGSIPYIRMLLFITLTGYFLTIGPLRSSWKLLAR---VRKGVA----LGIWGRDVF

Query:  LRRKNRIKACKISLKEAYSNPQSLNFDEIHRIEFELDNLLEEEEINWKQRSLEEWLKWGDKNSKWFHRKASIRGAN
           K RIK CK  L        +L+      ++ +L  ++++ E  WKQR+ + WLK GDKNS++FH  A+ R  N
Subjt:  LRRKNRIKACKISLKEAYSNPQSLNFDEIHRIEFELDNLLEEEEINWKQRSLEEWLKWGDKNSKWFHRKASIRGAN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAATTTCAGGCAAGCGATTAAAGATTGTCATCTGAAAGATATGCATTCCAGGGGGGCTAAGTTCACATGGCATGGTAATAAAAGGGGGCCCACATTCAAGAGAAA
CTGGATAGATTCCTCTGCAACAATGGGTTCGATTCCTTATATCCGGATGCTGCTGTTTATAACCTTGACTGGTTATTTTCTGACCATAGGCCCATTGAGATCATCTTGGA
AGCTGCTAGCTCGAGTAAGAAAGGGAGTTGCCTTAGGAATTTGGGGGAGAGATGTTTTCTTAAGGCGCAAAAACAGAATTAAAGCCTGTAAAATCTCTTTAAAAGAAGCC
TATAGTAACCCACAATCTTTAAATTTCGATGAGATTCATAGGATTGAGTTTGAGTTAGATAATCTCCTCGAAGAGGAAGAAATCAACTGGAAACAACGATCCCTGGAGGA
ATGGCTTAAGTGGGGAGACAAAAACTCAAAATGGTTTCATAGGAAAGCTTCCATCCGTGGTGCTAATTGGGCGAACAAGTTGTCCAGTGTTTCCTACTCCCAGATGGTCC
CTCTATATCACACCTTCTATTTGCGGACGACAGTTTGGTATTCTGCAAGGCTGACGAACTCGAGCTGCTCCACTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAAATTTCAGGCAAGCGATTAAAGATTGTCATCTGAAAGATATGCATTCCAGGGGGGCTAAGTTCACATGGCATGGTAATAAAAGGGGGCCCACATTCAAGAGAAA
CTGGATAGATTCCTCTGCAACAATGGGTTCGATTCCTTATATCCGGATGCTGCTGTTTATAACCTTGACTGGTTATTTTCTGACCATAGGCCCATTGAGATCATCTTGGA
AGCTGCTAGCTCGAGTAAGAAAGGGAGTTGCCTTAGGAATTTGGGGGAGAGATGTTTTCTTAAGGCGCAAAAACAGAATTAAAGCCTGTAAAATCTCTTTAAAAGAAGCC
TATAGTAACCCACAATCTTTAAATTTCGATGAGATTCATAGGATTGAGTTTGAGTTAGATAATCTCCTCGAAGAGGAAGAAATCAACTGGAAACAACGATCCCTGGAGGA
ATGGCTTAAGTGGGGAGACAAAAACTCAAAATGGTTTCATAGGAAAGCTTCCATCCGTGGTGCTAATTGGGCGAACAAGTTGTCCAGTGTTTCCTACTCCCAGATGGTCC
CTCTATATCACACCTTCTATTTGCGGACGACAGTTTGGTATTCTGCAAGGCTGACGAACTCGAGCTGCTCCACTTAA
Protein sequenceShow/hide protein sequence
MENFRQAIKDCHLKDMHSRGAKFTWHGNKRGPTFKRNWIDSSATMGSIPYIRMLLFITLTGYFLTIGPLRSSWKLLARVRKGVALGIWGRDVFLRRKNRIKACKISLKEA
YSNPQSLNFDEIHRIEFELDNLLEEEEINWKQRSLEEWLKWGDKNSKWFHRKASIRGANWANKLSSVSYSQMVPLYHTFYLRTTVWYSARLTNSSCST