; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0008134 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0008134
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr9:12850096..12851101
RNA-Seq ExpressionLag0008134
SyntenyLag0008134
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG8637949.1 hypothetical protein MANES_15G176096v8, partial [Manihot esculenta]2.4e-1030.8Show/hide
Query:  MAATSYQWSIERG----VISKKAGIYEFDESSSLKAQMASLTNVLNKLTSSEVVKSISTLAEWYSKKEGQDVEEVQWENFHANPREQCKMVTLRSGRQLE
        +A  +YQW+ ER      + K A I+E D    + A+  SL   ++K+T     K  S+ ++   K   Q            NPRE CK+V LRSG+ + 
Subjt:  MAATSYQWSIERG----VISKKAGIYEFDESSSLKAQMASLTNVLNKLTSSEVVKSISTLAEWYSKKEGQDVEEVQWENFHANPREQCKMVTLRSGRQLE

Query:  NSSEKKKEEEESKDEDERAEAKKTSSKRSQHPPNSIDLNCDFSNNLAGKKKDERQDGRHIEKLNEEEVVPCNHHDKGSHISPPKWRGECPTFDYRELPFP
        + SEKKK++++   E +    +K   KR Q                             +EK  EE  +P           P  ++          LPFP
Subjt:  NSSEKKKEEEESKDEDERAEAKKTSSKRSQHPPNSIDLNCDFSNNLAGKKKDERQDGRHIEKLNEEEVVPCNHHDKGSHISPPKWRGECPTFDYRELPFP

Query:  QRFRNVKLDEQFQKFLEMFKKLSVNIPLVDALYNVGL
        QRF+  KLD+QF K LE+ KKL VNIP +DAL  + L
Subjt:  QRFRNVKLDEQFQKFLEMFKKLSVNIPLVDALYNVGL

XP_016195244.1 uncharacterized protein LOC107636235 [Arachis ipaensis]2.9e-0835.22Show/hide
Query:  NPREQCKMVTLRSGRQLENSSEKKKEEEES----KDEDERAEAKKTSSKRSQHPPNSIDLNCDFSNNLAGKKKDERQDGRHIEKLNEEEVVPCNHHDKGS
        NP+E+CK + LRSG+ L    E  KE +ES     +E++  + K+T+SK++Q              N A +K+D+ Q  R  +++ EE   P     +G 
Subjt:  NPREQCKMVTLRSGRQLENSSEKKKEEEES----KDEDERAEAKKTSSKRSQHPPNSIDLNCDFSNNLAGKKKDERQDGRHIEKLNEEEVVPCNHHDKGS

Query:  HISPPKWRGECPTFDYRELPFPQRFRNVKLDEQFQKFLEMFKKLSVNIPLVDALYNVGL
        + +PP             LP+PQRF     D+ F KFLE+FKKL +NIPL +AL  + L
Subjt:  HISPPKWRGECPTFDYRELPFPQRFRNVKLDEQFQKFLEMFKKLSVNIPLVDALYNVGL

XP_017970395.1 PREDICTED: uncharacterized protein LOC108660654 [Theobroma cacao]4.5e-0928.07Show/hide
Query:  MAATSYQWSIERGVISKKAGIYEFDESSSLKAQMASLTNVLNKLTSSEVVKSISTLAEWYSKKEGQDVEEVQWENFHANPREQCKMVTLRSGRQLENSSE
        MA  +YQW  ER    K  G YE D  S+L  Q+A+L+  ++ L    V  SI  +       +G   ++  + N + + +EQC+ +TLR+G+++E  +E
Subjt:  MAATSYQWSIERGVISKKAGIYEFDESSSLKAQMASLTNVLNKLTSSEVVKSISTLAEWYSKKEGQDVEEVQWENFHANPREQCKMVTLRSGRQLENSSE

Query:  KKKEEEESKDEDERAEAKKTSSKRSQHPPNSIDLNCDFSNNLAGKKKDERQDGRHIEKLNEEEVVPCNHHDKGSHISPPKWRGECPTFDYRELPFPQRFR
        K  E E    ++ER   K++                                     ++ ++E V   +      I PP              PFPQR +
Subjt:  KKKEEEESKDEDERAEAKKTSSKRSQHPPNSIDLNCDFSNNLAGKKKDERQDGRHIEKLNEEEVVPCNHHDKGSHISPPKWRGECPTFDYRELPFPQRFR

Query:  NVKLDEQFQKFLEMFKKLSVNIPLVDAL
          KL++QFQKF+ +FKKL +NIP  +AL
Subjt:  NVKLDEQFQKFLEMFKKLSVNIPLVDAL

XP_030494963.1 uncharacterized protein LOC115710749 [Cannabis sativa]1.4e-1030.6Show/hide
Query:  MAATSYQWSIERGVISKKAGIYEFDESSSLKAQMASLTNVLN-KLTSSEVVKSISTLAEWYSKKEGQDVEEVQWENFHANPREQCKMVTLRSGRQLENSS
        MA T+ QWS ERG   K AG+YE D  + L AQ+ +LT ++  ++  ++VV  +  +A+  +++      EV+ +       EQCK ++LRSG+  +  S
Subjt:  MAATSYQWSIERGVISKKAGIYEFDESSSLKAQMASLTNVLN-KLTSSEVVKSISTLAEWYSKKEGQDVEEVQWENFHANPREQCKMVTLRSGRQLENSS

Query:  EKKKEEEESKDEDERAEAKKTSSKRSQH---PPNSIDLNCDFSNNLAGKKKDERQDGRHIEKLNEEEVVPCNHHDKGSHISPPKWRGECPTFDYRELPFP
        + K E EE +        KKT+    Q    PP SID                                   HH K                    +P+P
Subjt:  EKKKEEEESKDEDERAEAKKTSSKRSQH---PPNSIDLNCDFSNNLAGKKKDERQDGRHIEKLNEEEVVPCNHHDKGSHISPPKWRGECPTFDYRELPFP

Query:  QRFRNVKLDEQFQKFLEMFKKLSVNIPLVDAL
        QR +  K+D+QF KFLE+FKKL +NIP ++AL
Subjt:  QRFRNVKLDEQFQKFLEMFKKLSVNIPLVDAL

XP_030503011.1 uncharacterized protein LOC115718203 [Cannabis sativa]1.4e-1030.6Show/hide
Query:  MAATSYQWSIERGVISKKAGIYEFDESSSLKAQMASLTNVLN-KLTSSEVVKSISTLAEWYSKKEGQDVEEVQWENFHANPREQCKMVTLRSGRQLENSS
        MA T+ QWS ERG   K AG+YE D  + L AQ+ +LT ++  ++  ++VV  +  +A+  +++      EV+ +       EQCK ++LRSG+  +  S
Subjt:  MAATSYQWSIERGVISKKAGIYEFDESSSLKAQMASLTNVLN-KLTSSEVVKSISTLAEWYSKKEGQDVEEVQWENFHANPREQCKMVTLRSGRQLENSS

Query:  EKKKEEEESKDEDERAEAKKTSSKRSQH---PPNSIDLNCDFSNNLAGKKKDERQDGRHIEKLNEEEVVPCNHHDKGSHISPPKWRGECPTFDYRELPFP
        + K E EE +        KKT+    Q    PP SID                                   HH K                    +P+P
Subjt:  EKKKEEEESKDEDERAEAKKTSSKRSQH---PPNSIDLNCDFSNNLAGKKKDERQDGRHIEKLNEEEVVPCNHHDKGSHISPPKWRGECPTFDYRELPFP

Query:  QRFRNVKLDEQFQKFLEMFKKLSVNIPLVDAL
        QR +  K+D+QF KFLE+FKKL +NIP ++AL
Subjt:  QRFRNVKLDEQFQKFLEMFKKLSVNIPLVDAL

TrEMBL top hitse value%identityAlignment
A0A3S3N117 Retrotrans_gag domain-containing protein2.9e-0634.21Show/hide
Query:  NPREQCKMVTLRSGRQLENSSEKKKEEEESKDEDERAEAKKTSSKRSQHPPNSIDLNCDFSNNLAGKKKDERQDGRHIEKLNEEEVVPC--NHHDKGSHI
        NPREQ + +TLRSG++L  +   K E+E+S                        D     SN  + +KK+E           E++ VPC     D  +  
Subjt:  NPREQCKMVTLRSGRQLENSSEKKKEEEESKDEDERAEAKKTSSKRSQHPPNSIDLNCDFSNNLAGKKKDERQDGRHIEKLNEEEVVPC--NHHDKGSHI

Query:  SPPKWRGECPTFDYRELPFPQRFRNVKLDEQFQKFLEMFKKLSVNIPLVDAL
         PP             +P+PQR R  KLD+QF KFL++FKKL VNIP  DAL
Subjt:  SPPKWRGECPTFDYRELPFPQRFRNVKLDEQFQKFLEMFKKLSVNIPLVDAL

A0A6P4BCN1 uncharacterized protein LOC1074656288.5e-0631.61Show/hide
Query:  NPREQCKMVTLRSGRQLENSSEKKKEEEESKDEDERAEAKKTSSKRSQHPPNSIDLNCDFSNNLAGKKKDERQDGRHIEKLNEEEVVPCNHHDKGSHISP
        NP+E+CK + LRS R LEN     K+E  ++++D+                               KK++E Q  R  +K+ +E+  P     +  H +P
Subjt:  NPREQCKMVTLRSGRQLENSSEKKKEEEESKDEDERAEAKKTSSKRSQHPPNSIDLNCDFSNNLAGKKKDERQDGRHIEKLNEEEVVPCNHHDKGSHISP

Query:  PKWRGECPTFDYRELPFPQRFRNVKLDEQFQKFLEMFKKLSVNIPLVDALYNVGL
        P             LP+PQR +    D+QF KFLE+FKKL +N+PLV+AL  + L
Subjt:  PKWRGECPTFDYRELPFPQRFRNVKLDEQFQKFLEMFKKLSVNIPLVDALYNVGL

A0A6P4BT80 uncharacterized protein LOC1074724941.0e-0632.26Show/hide
Query:  NPREQCKMVTLRSGRQLENSSEKKKEEEESKDEDERAEAKKTSSKRSQHPPNSIDLNCDFSNNLAGKKKDERQDGRHIEKLNEEEVVPCNHHDKGSHISP
        NP+E+CK++ LRSGR L ++++  +++ E             SSK+  +   + D N   + N    K +E Q    I    +EE        K   ++P
Subjt:  NPREQCKMVTLRSGRQLENSSEKKKEEEESKDEDERAEAKKTSSKRSQHPPNSIDLNCDFSNNLAGKKKDERQDGRHIEKLNEEEVVPCNHHDKGSHISP

Query:  PKWRGECPTFDYRELPFPQRFRNVKLDEQFQKFLEMFKKLSVNIPLVDALYNVGL
        P             LP+PQRF     D+ F+KFLE FKKL +NIPL +AL  + L
Subjt:  PKWRGECPTFDYRELPFPQRFRNVKLDEQFQKFLEMFKKLSVNIPLVDALYNVGL

A0A6P4C5D5 uncharacterized protein LOC1074654338.5e-0633.96Show/hide
Query:  NPREQCKMVTLRSGRQL---ENSSEKKKEEEESKDEDERA-EAKKTSSKRSQHPPNSIDLNCDFSNNLAGKKKDERQDGRHIEKLNEEEVVPCNHHDKGS
        NP+E+CK + LRSG+ L   E ++ K KE +E + E E+A +   T+SK+ Q+ P           + A K + E++      K   +EV          
Subjt:  NPREQCKMVTLRSGRQL---ENSSEKKKEEEESKDEDERA-EAKKTSSKRSQHPPNSIDLNCDFSNNLAGKKKDERQDGRHIEKLNEEEVVPCNHHDKGS

Query:  HISPPKWRGECPTFDYRELPFPQRFRNVKLDEQFQKFLEMFKKLSVNIPLVDALYNVGL
        + +PP             LP+PQRF     D+ F KFLE+FKKL +NIPL +AL  + L
Subjt:  HISPPKWRGECPTFDYRELPFPQRFRNVKLDEQFQKFLEMFKKLSVNIPLVDALYNVGL

A0A6P4C5K1 uncharacterized protein LOC1074656265.0e-0631.41Show/hide
Query:  ANPREQCKMVTLRSGRQLENSSEKKKEEEESKDEDERAEAKKTSSKRSQHPPNSIDLNCDFSNNLAGKKKDERQDGRHIEKLNEEEVVPCNHHDKGSHIS
        +NP+E+CK + LRS R LEN     K+E  ++++D+                               KK++E Q  R  +K+ +E+  P     +  H +
Subjt:  ANPREQCKMVTLRSGRQLENSSEKKKEEEESKDEDERAEAKKTSSKRSQHPPNSIDLNCDFSNNLAGKKKDERQDGRHIEKLNEEEVVPCNHHDKGSHIS

Query:  PPKWRGECPTFDYRELPFPQRFRNVKLDEQFQKFLEMFKKLSVNIPLVDALYNVGL
        PP             LP+PQR +    D+QF KFLE+FKKL +N+PLV+AL  + L
Subjt:  PPKWRGECPTFDYRELPFPQRFRNVKLDEQFQKFLEMFKKLSVNIPLVDALYNVGL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGCAACCAGTTATCAGTGGTCGATCGAGAGGGGAGTAATTTCAAAGAAAGCTGGAATTTATGAATTCGATGAGTCGAGTTCGTTGAAGGCACAGATGGCATCTCT
GACCAATGTGCTGAACAAGCTGACTTCATCTGAGGTGGTCAAGTCCATTTCCACCTTAGCTGAATGGTATTCAAAGAAGGAAGGTCAAGATGTGGAAGAAGTCCAATGGG
AAAATTTCCATGCTAACCCAAGAGAGCAGTGCAAGATGGTGACACTGAGAAGTGGTAGACAGCTGGAGAACAGTTCAGAAAAGAAGAAGGAAGAAGAAGAGAGCAAGGAT
GAAGATGAAAGGGCTGAGGCAAAAAAAACCTCCTCTAAAAGGTCCCAACATCCTCCTAACTCTATTGATTTAAATTGTGATTTTTCTAACAATCTTGCAGGAAAGAAGAA
AGATGAAAGGCAAGATGGCAGGCATATAGAGAAACTGAACGAGGAAGAAGTAGTTCCATGCAACCATCATGACAAAGGCTCACACATTAGCCCACCTAAGTGGAGGGGAG
AATGTCCAACCTTTGACTACAGGGAGTTACCTTTTCCTCAACGCTTTAGAAATGTTAAATTAGATGAGCAGTTTCAAAAATTCCTAGAAATGTTTAAGAAATTGTCTGTG
AATATTCCTTTAGTAGATGCCTTGTATAATGTTGGGCTCCTAGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGCAACCAGTTATCAGTGGTCGATCGAGAGGGGAGTAATTTCAAAGAAAGCTGGAATTTATGAATTCGATGAGTCGAGTTCGTTGAAGGCACAGATGGCATCTCT
GACCAATGTGCTGAACAAGCTGACTTCATCTGAGGTGGTCAAGTCCATTTCCACCTTAGCTGAATGGTATTCAAAGAAGGAAGGTCAAGATGTGGAAGAAGTCCAATGGG
AAAATTTCCATGCTAACCCAAGAGAGCAGTGCAAGATGGTGACACTGAGAAGTGGTAGACAGCTGGAGAACAGTTCAGAAAAGAAGAAGGAAGAAGAAGAGAGCAAGGAT
GAAGATGAAAGGGCTGAGGCAAAAAAAACCTCCTCTAAAAGGTCCCAACATCCTCCTAACTCTATTGATTTAAATTGTGATTTTTCTAACAATCTTGCAGGAAAGAAGAA
AGATGAAAGGCAAGATGGCAGGCATATAGAGAAACTGAACGAGGAAGAAGTAGTTCCATGCAACCATCATGACAAAGGCTCACACATTAGCCCACCTAAGTGGAGGGGAG
AATGTCCAACCTTTGACTACAGGGAGTTACCTTTTCCTCAACGCTTTAGAAATGTTAAATTAGATGAGCAGTTTCAAAAATTCCTAGAAATGTTTAAGAAATTGTCTGTG
AATATTCCTTTAGTAGATGCCTTGTATAATGTTGGGCTCCTAGAGTGA
Protein sequenceShow/hide protein sequence
MAATSYQWSIERGVISKKAGIYEFDESSSLKAQMASLTNVLNKLTSSEVVKSISTLAEWYSKKEGQDVEEVQWENFHANPREQCKMVTLRSGRQLENSSEKKKEEEESKD
EDERAEAKKTSSKRSQHPPNSIDLNCDFSNNLAGKKKDERQDGRHIEKLNEEEVVPCNHHDKGSHISPPKWRGECPTFDYRELPFPQRFRNVKLDEQFQKFLEMFKKLSV
NIPLVDALYNVGLLE