; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0008176 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0008176
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionLOW QUALITY PROTEIN: uncharacterized protein LOC110412945
Genome locationchr9:13957642..13959055
RNA-Seq ExpressionLag0008176
SyntenyLag0008176
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
WP_217833153.1 retrotransposon gag domain-containing protein, partial [Synechococcus sp. PCC 7002]3.2e-2048.25Show/hide
Query:  KELLDTSGGGSFLSKTVMEAKDLLEEMAATSYQWLTVRGT--ISKNAGIYELDESSSLKAQMAYLTNALNKLTSSEVVK----SISTLAEGYSK-NEGQD
        K +LD + GGS  SK   EA  +LE++A TSY W   R +  I K AG+YE+DE +SLKAQMA LTNAL+KLT+    +    SI++LA   S+     D
Subjt:  KELLDTSGGGSFLSKTVMEAKDLLEEMAATSYQWLTVRGT--ISKNAGIYELDESSSLKAQMAYLTNALNKLTSSEVVK----SISTLAEGYSK-NEGQD

Query:  VEEVSYVGNRPFT----QGVPNFYHPSLRNHENFSYSNTKNVL
         E  +YV    +     Q +P  YHP+LRNHENFSY+N KNVL
Subjt:  VEEVSYVGNRPFT----QGVPNFYHPSLRNHENFSYSNTKNVL

XP_023874613.1 uncharacterized protein LOC111987139 [Quercus suber]1.2e-1942.86Show/hide
Query:  QPKELLDTSGGGSFLSKTVMEAKDLLEEMAATSYQWLTVRGTISKNAGIYELDESSSLKAQMAYLTNALNKLTSSEVVKSISTLAEG---YSKNEGQDVE
        Q + ++D + GG+ +SKT   A  LLEEMA+ +YQW T R    K AGI+EL+  ++L AQ+A L++ ++ LT+  + +    +A        NE    E
Subjt:  QPKELLDTSGGGSFLSKTVMEAKDLLEEMAATSYQWLTVRGTISKNAGIYELDESSSLKAQMAYLTNALNKLTSSEVVKSISTLAEG---YSKNEGQDVE

Query:  EVSYVGNRPFT---QGVPNFYHPSLRNHENFSYSNTKNVL
        +V Y+ NR +      +PN+YHP LRNHENFSY NTKNVL
Subjt:  EVSYVGNRPFT---QGVPNFYHPSLRNHENFSYSNTKNVL

XP_023903214.1 uncharacterized protein LOC112015077 [Quercus suber]1.2e-1942.86Show/hide
Query:  QPKELLDTSGGGSFLSKTVMEAKDLLEEMAATSYQWLTVRGTISKNAGIYELDESSSLKAQMAYLTNALNKLTSSEVVKSISTLAEG---YSKNEGQDVE
        Q + ++D + GG+ +SKT   A  LLEEMA+ +YQW T R    K AGI+EL+  ++L AQ+A L++ ++ L++  + +S   +A        NE    E
Subjt:  QPKELLDTSGGGSFLSKTVMEAKDLLEEMAATSYQWLTVRGTISKNAGIYELDESSSLKAQMAYLTNALNKLTSSEVVKSISTLAEG---YSKNEGQDVE

Query:  EVSYVGNRPFT---QGVPNFYHPSLRNHENFSYSNTKNVL
        +V Y+ NR +      +PN+YHP LRNHENFSY NTKNVL
Subjt:  EVSYVGNRPFT---QGVPNFYHPSLRNHENFSYSNTKNVL

XP_023929660.1 uncharacterized protein LOC112040975 [Quercus suber]3.2e-2043.57Show/hide
Query:  QPKELLDTSGGGSFLSKTVMEAKDLLEEMAATSYQWLTVRGTISKNAGIYELDESSSLKAQMAYLTNALNKLTSSEVVKSISTLAEG---YSKNEGQDVE
        Q + ++D + GG+ +SKT   A  LLEEMA+  YQW T R    K AGI+EL+  ++L AQ+A L++ ++ LT+  + +S+  +A        NE    E
Subjt:  QPKELLDTSGGGSFLSKTVMEAKDLLEEMAATSYQWLTVRGTISKNAGIYELDESSSLKAQMAYLTNALNKLTSSEVVKSISTLAEG---YSKNEGQDVE

Query:  EVSYVGNRPFT---QGVPNFYHPSLRNHENFSYSNTKNVL
         V Y+ NR +      +PN+YHP LRNHENFSY NTKNVL
Subjt:  EVSYVGNRPFT---QGVPNFYHPSLRNHENFSYSNTKNVL

XP_024017305.1 uncharacterized protein LOC112090376 [Morus notabilis]4.2e-2041.73Show/hide
Query:  QPKELLDTSGGGSFLSKTVMEAKDLLEEMAATSYQWLTVRGTISKNAGIYELDESSSLKAQMAYLTNALNKLTSSEVVKSISTLAEGYS--KNEGQDVEE
        Q + ++D++ GGS ++K+++EA +LLEEM+  SYQW + R    K AGI+E+D  +SL AQ++ L+N +  LT+ E   S   +A   +   ++    E+
Subjt:  QPKELLDTSGGGSFLSKTVMEAKDLLEEMAATSYQWLTVRGTISKNAGIYELDESSSLKAQMAYLTNALNKLTSSEVVKSISTLAEGYS--KNEGQDVEE

Query:  VSYVGNRPFT---QGVPNFYHPSLRNHENFSYSNTKNVL
        V +V NR F      +PN YHP LRNHENFSY+N +N+L
Subjt:  VSYVGNRPFT---QGVPNFYHPSLRNHENFSYSNTKNVL

TrEMBL top hitse value%identityAlignment
A0A2I4FCJ6 uncharacterized protein LOC1089975164.4e-1538.41Show/hide
Query:  KELLDTSGGGSFLSKTVMEAKDLLEEMAATSYQWLTVRGTISKNAGIYELDESSSLKAQMAYLTNALNKLTSSEVVKSISTLAEG---YSKNEGQDVEEV
        K  +D + GG+ +SKT   A  LLEEM + +YQW + R    K  GI+EL+  ++L AQ+A L++ ++ LT+  + ++   +A        NE    E+V
Subjt:  KELLDTSGGGSFLSKTVMEAKDLLEEMAATSYQWLTVRGTISKNAGIYELDESSSLKAQMAYLTNALNKLTSSEVVKSISTLAEG---YSKNEGQDVEEV

Query:  SYVGNRPFT---QGVPNFYHPSLRNHENFSYSNTKNVL
         Y+ N+ +      +PN+YH  L+NHEN SY NTKNVL
Subjt:  SYVGNRPFT---QGVPNFYHPSLRNHENFSYSNTKNVL

A0A2I4FP56 uncharacterized protein LOC1090008375.2e-1638.57Show/hide
Query:  QPKELLDTSGGGSFLSKTVMEAKDLLEEMAATSYQWLTVRGTISKNAGIYELDESSSLKAQMAYLTNALNKLTSSEVVKS---ISTLAEGYSKNEGQDVE
        Q +  +D + GG  +SKT      LLEEMA+++YQW T R    K AGI+EL+  +++ AQ+A L++ ++ L +  + +S   ++  +     NE    E
Subjt:  QPKELLDTSGGGSFLSKTVMEAKDLLEEMAATSYQWLTVRGTISKNAGIYELDESSSLKAQMAYLTNALNKLTSSEVVKS---ISTLAEGYSKNEGQDVE

Query:  EVSYVGNRPFT---QGVPNFYHPSLRNHENFSYSNTKNVL
        +V Y+ N+ +      +PN +HP LRNHEN SY NTKNVL
Subjt:  EVSYVGNRPFT---QGVPNFYHPSLRNHENFSYSNTKNVL

A0A2I4G4Q3 uncharacterized protein LOC1090047128.8e-1638.85Show/hide
Query:  KELLDTSGGGSFLSKTVMEAKDLLEEMAATSYQWLTVRGTISKNAGIYELDESSSLKAQMAYLTNALNKLTSSEVVKS----ISTLAEGYSKNEGQDVEE
        + ++D + GG+ + KT+  A  LLEEMA+ +YQW   R    K A I+EL+  ++L AQ+A L++ ++ LT+  + +S    ++T     S    Q  E+
Subjt:  KELLDTSGGGSFLSKTVMEAKDLLEEMAATSYQWLTVRGTISKNAGIYELDESSSLKAQMAYLTNALNKLTSSEVVKS----ISTLAEGYSKNEGQDVEE

Query:  VSYVGNRPFT---QGVPNFYHPSLRNHENFSYSNTKNVL
        V Y+ NR +      +PN+YHP  +NHEN SY NTKNVL
Subjt:  VSYVGNRPFT---QGVPNFYHPSLRNHENFSYSNTKNVL

A0A2P5B7D3 Uncharacterized protein (Fragment)2.5e-1840.29Show/hide
Query:  LLDTSGGGSFLSKTVMEAKDLLEEMAATSYQWLTVRGTISKNAGIYELDESSSLKAQMAYLTNALNKLTSSEVVKSISTLAEGYSK--NEGQDVEEVSYV
        ++D + GG+ LSKT  EA+  LEEMA+ +YQW   R  + + A + E+D  + L AQ++ LT+ ++ LT+ E   S   +    +   N G D+E+V+Y+
Subjt:  LLDTSGGGSFLSKTVMEAKDLLEEMAATSYQWLTVRGTISKNAGIYELDESSSLKAQMAYLTNALNKLTSSEVVKSISTLAEGYSK--NEGQDVEEVSYV

Query:  GNRPF-------TQGVPNFYHPSLRNHENFSYSNTKNVL
         N+ F       +  +P  YHPSLRNHENFSY+N +NVL
Subjt:  GNRPF-------TQGVPNFYHPSLRNHENFSYSNTKNVL

A0A803PT47 Uncharacterized protein2.7e-1738.41Show/hide
Query:  KELLDTSGGGSFLSKTVMEAKDLLEEMAATSYQWLTVRGTISKNAGIYELDESSSLKAQMAYLTNALNKLTSSEVVKSI-STLAEGYSKNEGQDVEEVSY
        + L+D + GG+ LSK + EA +LLEEMA  SY W   R T  K AG++E+D  +++ AQ++ L+N    L + +   ++ + +A   S+     +E+  Y
Subjt:  KELLDTSGGGSFLSKTVMEAKDLLEEMAATSYQWLTVRGTISKNAGIYELDESSSLKAQMAYLTNALNKLTSSEVVKSI-STLAEGYSKNEGQDVEEVSY

Query:  VGNRPFTQG-----VPNFYHPSLRNHENFSYSNTKNVL
        +  + +        +PN+YHP LRNHEN SY NTKNVL
Subjt:  VGNRPFTQG-----VPNFYHPSLRNHENFSYSNTKNVL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCCACGTAGAAGAGAATCAGGCAGACATGGTAGACCAGTCGAAGCAAGAGTTAATCCTGATGCAGTGAATCCACCCTTGGAACAACCGATGAACTATGAGGAACC
ACCGGTAGCACAACCTAAGGAGCTTTTAGACACATCAGGAGGAGGAAGTTTTCTTTCCAAAACAGTGATGGAAGCAAAGGATCTGCTAGAGGAAATGGCAGCAACCAGCT
ACCAGTGGCTGACCGTGAGGGGAACGATTTCTAAGAATGCTGGAATTTATGAATTAGATGAGTCAAGTTCGTTGAAGGCACAGATGGCATATTTGACCAATGCCCTGAAC
AAGCTGACTTCATCTGAGGTGGTCAAGTCCATTTCCACCTTAGCTGAAGGGTATTCAAAGAACGAAGGTCAAGATGTGGAAGAAGTTTCGTATGTAGGAAACAGACCATT
TACTCAAGGAGTACCGAACTTCTACCACCCCAGTCTGCGCAATCATGAGAACTTCTCGTACTCAAACACGAAGAACGTATTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCCTCCACGTAGAAGAGAATCAGGCAGACATGGTAGACCAGTCGAAGCAAGAGTTAATCCTGATGCAGTGAATCCACCCTTGGAACAACCGATGAACTATGAGGAACC
ACCGGTAGCACAACCTAAGGAGCTTTTAGACACATCAGGAGGAGGAAGTTTTCTTTCCAAAACAGTGATGGAAGCAAAGGATCTGCTAGAGGAAATGGCAGCAACCAGCT
ACCAGTGGCTGACCGTGAGGGGAACGATTTCTAAGAATGCTGGAATTTATGAATTAGATGAGTCAAGTTCGTTGAAGGCACAGATGGCATATTTGACCAATGCCCTGAAC
AAGCTGACTTCATCTGAGGTGGTCAAGTCCATTTCCACCTTAGCTGAAGGGTATTCAAAGAACGAAGGTCAAGATGTGGAAGAAGTTTCGTATGTAGGAAACAGACCATT
TACTCAAGGAGTACCGAACTTCTACCACCCCAGTCTGCGCAATCATGAGAACTTCTCGTACTCAAACACGAAGAACGTATTGTAG
Protein sequenceShow/hide protein sequence
MPPRRRESGRHGRPVEARVNPDAVNPPLEQPMNYEEPPVAQPKELLDTSGGGSFLSKTVMEAKDLLEEMAATSYQWLTVRGTISKNAGIYELDESSSLKAQMAYLTNALN
KLTSSEVVKSISTLAEGYSKNEGQDVEEVSYVGNRPFTQGVPNFYHPSLRNHENFSYSNTKNVL