| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0048297.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 2.1e-69 | 32.79 | Show/hide |
Query: MFHYTLAKEIWTCLTQIFTTHNLAQIMKIKTKLQTIQKGGMSLKEYFSKIQQYVDALAAVDKPCT----------------LNLLNLI-----------L
M H AKEIW L IF++ LAQ M+ K KL I+KG M LKEYF KI Q VDALA+++KP + +++++I +
Subjt: MFHYTLAKEIWTCLTQIFTTHNLAQIMKIKTKLQTIQKGGMSLKEYFSKIQQYVDALAAVDKPCT----------------LNLLNLI-----------L
Query: LRLILINFPQVLVMEIGEV----------------------------------DRGGRG-GPSNRGGRGGHSWNNRNRVQCQLCTKFGHTTAKCFFRYAP
+ L+L Q I E RGGRG G SNRG RG NRN+ QCQ+C K G++ +CFFRY P
Subjt: LRLILINFPQVLVMEIGEV----------------------------------DRGGRG-GPSNRGGRGGHSWNNRNRVQCQLCTKFGHTTAKCFFRYAP
Query: R--FAPMDPGSFSSTYNQFNRFPTFPLMFVMVATPNLNQDNNWYPDSGATNHLTHSFNNLSVGSEYGSGNQVHVENGT----------------------
R + P S +++Y N P M MVA +LN D+NWYPDSGATNHLTHS +NLS+GSEYG GNQ++ NG+
Subjt: R--FAPMDPGSFSSTYNQFNRFPTFPLMFVMVATPNLNQDNNWYPDSGATNHLTHSFNNLSVGSEYGSGNQVHVENGT----------------------
Query: -------------------------------------------------------------------------------------------DVWHRRLGH
D+WHRRLGH
Subjt: -------------------------------------------------------------------------------------------DVWHRRLGH
Query: PTLSTVKTVL-RLYKPTLSINNSNFHFCNACSMGKHHNLPFSYSVTVYSAPLQLVVSDLWGPSYISSKNGYRYYISFVD---------------------
P L VK VL + + +IN N FC AC++GKHH LPFS+S+T+Y+ PLQL+ DLWGP+ S NG+RYYISFVD
Subjt: PTLSTVKTVL-RLYKPTLSINNSNFHFCNACSMGKHHNLPFSYSVTVYSAPLQLVVSDLWGPSYISSKNGYRYYISFVD---------------------
Query: -------------------------------------------------QNGIAEHKHRHIVDTGLALMSQTSMPLEYWDEAFATAVFLINRLPTIVFNH
QN I E KHR+I++ GL L+SQ ++PL +WDEAF+T+V+LINRLPT V ++
Subjt: -------------------------------------------------QNGIAEHKHRHIVDTGLALMSQTSMPLEYWDEAFATAVFLINRLPTIVFNH
Query: VSPLEKLFQTKPD
+SPLEKLF KP+
Subjt: VSPLEKLFQTKPD
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| KZV26181.1 hypothetical protein F511_06348 [Dorcoceras hygrometricum] | 4.0e-49 | 26.67 | Show/hide |
Query: AKEIWTCLTQIFTTHNLAQIMKIKTKLQTIQKGGMSLKEYFSKIQQYVDALAAVDK--PCTLNLLNLI-----------------LLRLILINFPQVLVM
+ ++WT +TQ+F T + A++M+ K +LQT++KG +S+K+Y K++ Y+D LAA P +L+++ + L L +L+
Subjt: AKEIWTCLTQIFTTHNLAQIMKIKTKLQTIQKGGMSLKEYFSKIQQYVDALAAVDK--PCTLNLLNLI-----------------LLRLILINFPQVLVM
Query: EIGEVD----RGG----------------------------RGGPSNRGGRGGHS-WNNRNRVQCQLCTKFGHTTAKCFFRYAPRFAPMDPGSFSSTYNQ
G ++ GG RG R GRGG W+N R CQ+C GH C++R+ F P G ++ Q
Subjt: EIGEVD----RGG----------------------------RGGPSNRGGRGGHS-WNNRNRVQCQLCTKFGHTTAKCFFRYAPRFAPMDPGSFSSTYNQ
Query: FNR-FPTFPLMFVMVATPNLNQDNNWYPDSGATNHLTHSFNNLSVGSEYGSGNQVHVENGT---------------------------------------
FNR P++P + WYPDSGA++H+T+ NLSV SEY G++V V NG
Subjt: FNR-FPTFPLMFVMVATPNLNQDNNWYPDSGATNHLTHSFNNLSVGSEYGSGNQVHVENGT---------------------------------------
Query: -------------------------------------------------------------------------------DVWHRRLGHPTLSTVKTVLRL
D WH RLGHP+++TVK VL
Subjt: -------------------------------------------------------------------------------DVWHRRLGHPTLSTVKTVLRL
Query: YKPTLSINNSNFHFCNACSMGKHHNLPFSYSVTVYSAPLQLVVSDLWGPSYISSKNGYRYYISFVD----------------------------------
+S N N FC++C +GK+H LPF S T +SAP ++V SDLWGP++I S+NG RYYISFVD
Subjt: YKPTLSINNSNFHFCNACSMGKHHNLPFSYSVTVYSAPLQLVVSDLWGPSYISSKNGYRYYISFVD----------------------------------
Query: ------------------------------------QNGIAEHKHRHIVDTGLALMSQTSMPLEYWDEAFATAVFLINRLPTIVFNHVSPLEKLFQTKPD
QNG+ E KHRH+VDTGL+L++ S+P E+W++AF +AV+LINRLP+ SP L+ +PD
Subjt: ------------------------------------QNGIAEHKHRHIVDTGLALMSQTSMPLEYWDEAFATAVFLINRLPTIVFNHVSPLEKLFQTKPD
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| RVW41150.1 Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera] | 3.0e-52 | 33.2 | Show/hide |
Query: AKEIWTCLTQIFTTHNLAQIMKIKTKLQTIQKGGMSLKEYFSKIQQYVDALAAVD---------------------------------------------
A +IW L F + +I + KT LQ +K +S+ EY KI+ +VD LA V
Subjt: AKEIWTCLTQIFTTHNLAQIMKIKTKLQTIQKGGMSLKEYFSKIQQYVDALAAVD---------------------------------------------
Query: KPCTLNLLNLILLRLILI---------NFPQVLVMEIGEVDRGGRGGPSNRGGRGGHSWNNR-----NRVQCQLCTKFGHTTAKCFFRYAPRF-APMDPG
+ + N LL+L+L+ NF + G GRGG +N G R ++WNN + CQ+C K GH+ +C++RY P F P PG
Subjt: KPCTLNLLNLILLRLILI---------NFPQVLVMEIGEVDRGGRGGPSNRGGRGGHSWNNR-----NRVQCQLCTKFGHTTAKCFFRYAPRF-APMDPG
Query: ---SFSSTYNQFNRFPTFPLMFVMVATPNLNQDNNWYPDSGATNHLTHSFNNLSVGSEYGSGNQVHV---------------------------------
SF + + P M V++ATP D NWYPDSGA+NH+T + NNL + Y QV V
Subjt: ---SFSSTYNQFNRFPTFPLMFVMVATPNLNQDNNWYPDSGATNHLTHSFNNLSVGSEYGSGNQVHV---------------------------------
Query: --------------------------------ENGTD---VWHRRLGHPTLSTVKTVLRLYKPTLSINNS---NFHFCNACSMGKHHNLPFSYSVTVYSA
+NG+ +WH RLGHP+ V+TV+ L K LS N NF C AC +GK H LPF S++ Y
Subjt: --------------------------------ENGTD---VWHRRLGHPTLSTVKTVLRLYKPTLSINNS---NFHFCNACSMGKHHNLPFSYSVTVYSA
Query: PLQLVVSDLWGPSYISSKNGYRYYISFVD------------QNGIAEHKHRHIVDTGLALMSQTSMPLEYWDEAFATAVFLINRLPTIVFNHVS
PLQLV SDLWGPS + S NGY+YY+ FVD QNG+AE KHRHIV+ GL L+++ SMP +YWDE+F T VFL NRLP+ V +H S
Subjt: PLQLVVSDLWGPSYISSKNGYRYYISFVD------------QNGIAEHKHRHIVDTGLALMSQTSMPLEYWDEAFATAVFLINRLPTIVFNHVS
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| RVX14937.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 2.4e-46 | 32.28 | Show/hide |
Query: GEVDRG---GRGGPSNRGGRGGHS----WNNRNRVQ---CQLCTKFGHTTAKCFFRYAPRFAPMDPGSFSSTYNQFNRFPTF-PLMFVMVATPNLNQDNN
G +RG GRGG RG RG WN+ N+ + CQLC K GH A+C++R+ F P + S + +F P + ++ T + D+N
Subjt: GEVDRG---GRGGPSNRGGRGGHS----WNNRNRVQ---CQLCTKFGHTTAKCFFRYAPRFAPMDPGSFSSTYNQFNRFPTF-PLMFVMVATPNLNQDNN
Query: WYPDSGATNHLTHSFNNLSVGSEYGSGNQVHVENGT-------------------------------------------------------DVWHRRLGH
WYPDSGA+NH+T + NL E+ NQVHV NGT D+WH+RLG
Subjt: WYPDSGATNHLTHSFNNLSVGSEYGSGNQVHVENGT-------------------------------------------------------DVWHRRLGH
Query: PTLSTVKTVLRLYKPTLSINNSNFHFCNACSMGKHHNLPFSYSVTVYSAPLQLVVSDLWGPSYISSKNGYRYYISFVD----------------------
P+ +T+K VL IN + +FC++C +GK H PFS S T Y+ PL+L+ SDLWGP+ + S +GYRYYI FVD
Subjt: PTLSTVKTVLRLYKPTLSINNSNFHFCNACSMGKHHNLPFSYSVTVYSAPLQLVVSDLWGPSYISSKNGYRYYISFVD----------------------
Query: ------------------------------------------------QNGIAEHKHRHIVDTGLALMSQTSMPLEYWDEAFATAVFLINRLPTIVFNHV
QNG+AE KHR IV+ GL L+ S+PL++WDE+F T V+L NRLPT V +H
Subjt: ------------------------------------------------QNGIAEHKHRHIVDTGLALMSQTSMPLEYWDEAFATAVFLINRLPTIVFNHV
Query: SPLEKLFQTKPD
P+E LF++ PD
Subjt: SPLEKLFQTKPD
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| TYK10642.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 2.1e-69 | 32.79 | Show/hide |
Query: MFHYTLAKEIWTCLTQIFTTHNLAQIMKIKTKLQTIQKGGMSLKEYFSKIQQYVDALAAVDKPCT----------------LNLLNLI-----------L
M H AKEIW L IF++ LAQ M+ K KL I+KG M LKEYF KI Q VDALA+++KP + +++++I +
Subjt: MFHYTLAKEIWTCLTQIFTTHNLAQIMKIKTKLQTIQKGGMSLKEYFSKIQQYVDALAAVDKPCT----------------LNLLNLI-----------L
Query: LRLILINFPQVLVMEIGEV----------------------------------DRGGRG-GPSNRGGRGGHSWNNRNRVQCQLCTKFGHTTAKCFFRYAP
+ L+L Q I E RGGRG G SNRG RG NRN+ QCQ+C K G++ +CFFRY P
Subjt: LRLILINFPQVLVMEIGEV----------------------------------DRGGRG-GPSNRGGRGGHSWNNRNRVQCQLCTKFGHTTAKCFFRYAP
Query: R--FAPMDPGSFSSTYNQFNRFPTFPLMFVMVATPNLNQDNNWYPDSGATNHLTHSFNNLSVGSEYGSGNQVHVENGT----------------------
R + P S +++Y N P M MVA +LN D+NWYPDSGATNHLTHS +NLS+GSEYG GNQ++ NG+
Subjt: R--FAPMDPGSFSSTYNQFNRFPTFPLMFVMVATPNLNQDNNWYPDSGATNHLTHSFNNLSVGSEYGSGNQVHVENGT----------------------
Query: -------------------------------------------------------------------------------------------DVWHRRLGH
D+WHRRLGH
Subjt: -------------------------------------------------------------------------------------------DVWHRRLGH
Query: PTLSTVKTVL-RLYKPTLSINNSNFHFCNACSMGKHHNLPFSYSVTVYSAPLQLVVSDLWGPSYISSKNGYRYYISFVD---------------------
P L VK VL + + +IN N FC AC++GKHH LPFS+S+T+Y+ PLQL+ DLWGP+ S NG+RYYISFVD
Subjt: PTLSTVKTVL-RLYKPTLSINNSNFHFCNACSMGKHHNLPFSYSVTVYSAPLQLVVSDLWGPSYISSKNGYRYYISFVD---------------------
Query: -------------------------------------------------QNGIAEHKHRHIVDTGLALMSQTSMPLEYWDEAFATAVFLINRLPTIVFNH
QN I E KHR+I++ GL L+SQ ++PL +WDEAF+T+V+LINRLPT V ++
Subjt: -------------------------------------------------QNGIAEHKHRHIVDTGLALMSQTSMPLEYWDEAFATAVFLINRLPTIVFNH
Query: VSPLEKLFQTKPD
+SPLEKLF KP+
Subjt: VSPLEKLFQTKPD
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A2Z7AWA7 Integrase catalytic domain-containing protein | 2.0e-49 | 26.67 | Show/hide |
Query: AKEIWTCLTQIFTTHNLAQIMKIKTKLQTIQKGGMSLKEYFSKIQQYVDALAAVDK--PCTLNLLNLI-----------------LLRLILINFPQVLVM
+ ++WT +TQ+F T + A++M+ K +LQT++KG +S+K+Y K++ Y+D LAA P +L+++ + L L +L+
Subjt: AKEIWTCLTQIFTTHNLAQIMKIKTKLQTIQKGGMSLKEYFSKIQQYVDALAAVDK--PCTLNLLNLI-----------------LLRLILINFPQVLVM
Query: EIGEVD----RGG----------------------------RGGPSNRGGRGGHS-WNNRNRVQCQLCTKFGHTTAKCFFRYAPRFAPMDPGSFSSTYNQ
G ++ GG RG R GRGG W+N R CQ+C GH C++R+ F P G ++ Q
Subjt: EIGEVD----RGG----------------------------RGGPSNRGGRGGHS-WNNRNRVQCQLCTKFGHTTAKCFFRYAPRFAPMDPGSFSSTYNQ
Query: FNR-FPTFPLMFVMVATPNLNQDNNWYPDSGATNHLTHSFNNLSVGSEYGSGNQVHVENGT---------------------------------------
FNR P++P + WYPDSGA++H+T+ NLSV SEY G++V V NG
Subjt: FNR-FPTFPLMFVMVATPNLNQDNNWYPDSGATNHLTHSFNNLSVGSEYGSGNQVHVENGT---------------------------------------
Query: -------------------------------------------------------------------------------DVWHRRLGHPTLSTVKTVLRL
D WH RLGHP+++TVK VL
Subjt: -------------------------------------------------------------------------------DVWHRRLGHPTLSTVKTVLRL
Query: YKPTLSINNSNFHFCNACSMGKHHNLPFSYSVTVYSAPLQLVVSDLWGPSYISSKNGYRYYISFVD----------------------------------
+S N N FC++C +GK+H LPF S T +SAP ++V SDLWGP++I S+NG RYYISFVD
Subjt: YKPTLSINNSNFHFCNACSMGKHHNLPFSYSVTVYSAPLQLVVSDLWGPSYISSKNGYRYYISFVD----------------------------------
Query: ------------------------------------QNGIAEHKHRHIVDTGLALMSQTSMPLEYWDEAFATAVFLINRLPTIVFNHVSPLEKLFQTKPD
QNG+ E KHRH+VDTGL+L++ S+P E+W++AF +AV+LINRLP+ SP L+ +PD
Subjt: ------------------------------------QNGIAEHKHRHIVDTGLALMSQTSMPLEYWDEAFATAVFLINRLPTIVFNHVSPLEKLFQTKPD
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| A0A438E0F0 Retrovirus-related Pol polyprotein from transposon RE1 | 1.4e-52 | 33.2 | Show/hide |
Query: AKEIWTCLTQIFTTHNLAQIMKIKTKLQTIQKGGMSLKEYFSKIQQYVDALAAVD---------------------------------------------
A +IW L F + +I + KT LQ +K +S+ EY KI+ +VD LA V
Subjt: AKEIWTCLTQIFTTHNLAQIMKIKTKLQTIQKGGMSLKEYFSKIQQYVDALAAVD---------------------------------------------
Query: KPCTLNLLNLILLRLILI---------NFPQVLVMEIGEVDRGGRGGPSNRGGRGGHSWNNR-----NRVQCQLCTKFGHTTAKCFFRYAPRF-APMDPG
+ + N LL+L+L+ NF + G GRGG +N G R ++WNN + CQ+C K GH+ +C++RY P F P PG
Subjt: KPCTLNLLNLILLRLILI---------NFPQVLVMEIGEVDRGGRGGPSNRGGRGGHSWNNR-----NRVQCQLCTKFGHTTAKCFFRYAPRF-APMDPG
Query: ---SFSSTYNQFNRFPTFPLMFVMVATPNLNQDNNWYPDSGATNHLTHSFNNLSVGSEYGSGNQVHV---------------------------------
SF + + P M V++ATP D NWYPDSGA+NH+T + NNL + Y QV V
Subjt: ---SFSSTYNQFNRFPTFPLMFVMVATPNLNQDNNWYPDSGATNHLTHSFNNLSVGSEYGSGNQVHV---------------------------------
Query: --------------------------------ENGTD---VWHRRLGHPTLSTVKTVLRLYKPTLSINNS---NFHFCNACSMGKHHNLPFSYSVTVYSA
+NG+ +WH RLGHP+ V+TV+ L K LS N NF C AC +GK H LPF S++ Y
Subjt: --------------------------------ENGTD---VWHRRLGHPTLSTVKTVLRLYKPTLSINNS---NFHFCNACSMGKHHNLPFSYSVTVYSA
Query: PLQLVVSDLWGPSYISSKNGYRYYISFVD------------QNGIAEHKHRHIVDTGLALMSQTSMPLEYWDEAFATAVFLINRLPTIVFNHVS
PLQLV SDLWGPS + S NGY+YY+ FVD QNG+AE KHRHIV+ GL L+++ SMP +YWDE+F T VFL NRLP+ V +H S
Subjt: PLQLVVSDLWGPSYISSKNGYRYYISFVD------------QNGIAEHKHRHIVDTGLALMSQTSMPLEYWDEAFATAVFLINRLPTIVFNHVS
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| A0A5A7U233 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.0e-69 | 32.79 | Show/hide |
Query: MFHYTLAKEIWTCLTQIFTTHNLAQIMKIKTKLQTIQKGGMSLKEYFSKIQQYVDALAAVDKPCT----------------LNLLNLI-----------L
M H AKEIW L IF++ LAQ M+ K KL I+KG M LKEYF KI Q VDALA+++KP + +++++I +
Subjt: MFHYTLAKEIWTCLTQIFTTHNLAQIMKIKTKLQTIQKGGMSLKEYFSKIQQYVDALAAVDKPCT----------------LNLLNLI-----------L
Query: LRLILINFPQVLVMEIGEV----------------------------------DRGGRG-GPSNRGGRGGHSWNNRNRVQCQLCTKFGHTTAKCFFRYAP
+ L+L Q I E RGGRG G SNRG RG NRN+ QCQ+C K G++ +CFFRY P
Subjt: LRLILINFPQVLVMEIGEV----------------------------------DRGGRG-GPSNRGGRGGHSWNNRNRVQCQLCTKFGHTTAKCFFRYAP
Query: R--FAPMDPGSFSSTYNQFNRFPTFPLMFVMVATPNLNQDNNWYPDSGATNHLTHSFNNLSVGSEYGSGNQVHVENGT----------------------
R + P S +++Y N P M MVA +LN D+NWYPDSGATNHLTHS +NLS+GSEYG GNQ++ NG+
Subjt: R--FAPMDPGSFSSTYNQFNRFPTFPLMFVMVATPNLNQDNNWYPDSGATNHLTHSFNNLSVGSEYGSGNQVHVENGT----------------------
Query: -------------------------------------------------------------------------------------------DVWHRRLGH
D+WHRRLGH
Subjt: -------------------------------------------------------------------------------------------DVWHRRLGH
Query: PTLSTVKTVL-RLYKPTLSINNSNFHFCNACSMGKHHNLPFSYSVTVYSAPLQLVVSDLWGPSYISSKNGYRYYISFVD---------------------
P L VK VL + + +IN N FC AC++GKHH LPFS+S+T+Y+ PLQL+ DLWGP+ S NG+RYYISFVD
Subjt: PTLSTVKTVL-RLYKPTLSINNSNFHFCNACSMGKHHNLPFSYSVTVYSAPLQLVVSDLWGPSYISSKNGYRYYISFVD---------------------
Query: -------------------------------------------------QNGIAEHKHRHIVDTGLALMSQTSMPLEYWDEAFATAVFLINRLPTIVFNH
QN I E KHR+I++ GL L+SQ ++PL +WDEAF+T+V+LINRLPT V ++
Subjt: -------------------------------------------------QNGIAEHKHRHIVDTGLALMSQTSMPLEYWDEAFATAVFLINRLPTIVFNH
Query: VSPLEKLFQTKPD
+SPLEKLF KP+
Subjt: VSPLEKLFQTKPD
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| A0A5D3CH97 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.0e-69 | 32.79 | Show/hide |
Query: MFHYTLAKEIWTCLTQIFTTHNLAQIMKIKTKLQTIQKGGMSLKEYFSKIQQYVDALAAVDKPCT----------------LNLLNLI-----------L
M H AKEIW L IF++ LAQ M+ K KL I+KG M LKEYF KI Q VDALA+++KP + +++++I +
Subjt: MFHYTLAKEIWTCLTQIFTTHNLAQIMKIKTKLQTIQKGGMSLKEYFSKIQQYVDALAAVDKPCT----------------LNLLNLI-----------L
Query: LRLILINFPQVLVMEIGEV----------------------------------DRGGRG-GPSNRGGRGGHSWNNRNRVQCQLCTKFGHTTAKCFFRYAP
+ L+L Q I E RGGRG G SNRG RG NRN+ QCQ+C K G++ +CFFRY P
Subjt: LRLILINFPQVLVMEIGEV----------------------------------DRGGRG-GPSNRGGRGGHSWNNRNRVQCQLCTKFGHTTAKCFFRYAP
Query: R--FAPMDPGSFSSTYNQFNRFPTFPLMFVMVATPNLNQDNNWYPDSGATNHLTHSFNNLSVGSEYGSGNQVHVENGT----------------------
R + P S +++Y N P M MVA +LN D+NWYPDSGATNHLTHS +NLS+GSEYG GNQ++ NG+
Subjt: R--FAPMDPGSFSSTYNQFNRFPTFPLMFVMVATPNLNQDNNWYPDSGATNHLTHSFNNLSVGSEYGSGNQVHVENGT----------------------
Query: -------------------------------------------------------------------------------------------DVWHRRLGH
D+WHRRLGH
Subjt: -------------------------------------------------------------------------------------------DVWHRRLGH
Query: PTLSTVKTVL-RLYKPTLSINNSNFHFCNACSMGKHHNLPFSYSVTVYSAPLQLVVSDLWGPSYISSKNGYRYYISFVD---------------------
P L VK VL + + +IN N FC AC++GKHH LPFS+S+T+Y+ PLQL+ DLWGP+ S NG+RYYISFVD
Subjt: PTLSTVKTVL-RLYKPTLSINNSNFHFCNACSMGKHHNLPFSYSVTVYSAPLQLVVSDLWGPSYISSKNGYRYYISFVD---------------------
Query: -------------------------------------------------QNGIAEHKHRHIVDTGLALMSQTSMPLEYWDEAFATAVFLINRLPTIVFNH
QN I E KHR+I++ GL L+SQ ++PL +WDEAF+T+V+LINRLPT V ++
Subjt: -------------------------------------------------QNGIAEHKHRHIVDTGLALMSQTSMPLEYWDEAFATAVFLINRLPTIVFNH
Query: VSPLEKLFQTKPD
+SPLEKLF KP+
Subjt: VSPLEKLFQTKPD
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| A0A803Q9W1 Uncharacterized protein | 1.5e-49 | 31.65 | Show/hide |
Query: AKEIWTCLTQIFTTHNLAQIMKIKTKLQTIQKGGMSLKEYFSKIQQYVDALAAV-------------------------------DKPCTLNLLNLILLR
A++IW+ L + FT ++I++ +TKLQ ++KG +SL +Y K++Q VD LA+V + T+ + +LL
Subjt: AKEIWTCLTQIFTTHNLAQIMKIKTKLQTIQKGGMSLKEYFSKIQQYVDALAAV-------------------------------DKPCTLNLLNLILLR
Query: L----------------ILINFPQVLVMEIGEVDRG-----GRG---------------------GPSNRGGRGG------------HSWNNRNRVQCQL
++ N P L ME R GRG G +N GGRG N N+VQCQL
Subjt: L----------------ILINFPQVLVMEIGEVDRG-----GRG---------------------GPSNRGGRGG------------HSWNNRNRVQCQL
Query: CTKFGHTTAKCFFRYAPRFAPMDPGSFSSTYNQFNRFPTFPLMFVMVATPNLNQDNNWYPDSGATNHLTHSFNNLSVGSEYGSGNQVHVENGTDVWHRRL
C + GHT CF+R+ F+ + GS S + + + T + + D++WYPDSGATNH T NL+ +Y +Q+ L
Subjt: CTKFGHTTAKCFFRYAPRFAPMDPGSFSSTYNQFNRFPTFPLMFVMVATPNLNQDNNWYPDSGATNHLTHSFNNLSVGSEYGSGNQVHVENGTDVWHRRL
Query: GHPTLSTVKTVLRLYKPTLSINNSNFHFCNACSMGKHHNLPF-SYSVTVYSAPLQLVVSDLWGPSYISSKNGYRYYISFVD-------------------
GHP+ V+TVL+ + F C AC +GK H PF S TV S PLQLVVSDLWGPS+ S NGY+YYI FVD
Subjt: GHPTLSTVKTVLRLYKPTLSINNSNFHFCNACSMGKHHNLPF-SYSVTVYSAPLQLVVSDLWGPSYISSKNGYRYYISFVD-------------------
Query: ---------------------------------------------------QNGIAEHKHRHIVDTGLALMSQTSMPLEYWDEAFATAVFLINRLPTIVF
QNG+AE KHRHIV+ GLAL++Q S+PL++WDEAF TAV+L NRLPT +
Subjt: ---------------------------------------------------QNGIAEHKHRHIVDTGLALMSQTSMPLEYWDEAFATAVFLINRLPTIVF
Query: NHVSPLEKLFQTKPD
SPLE LF TKPD
Subjt: NHVSPLEKLFQTKPD
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 2.4e-04 | 22.01 | Show/hide |
Query: LTHSFNNLSVGSEYGSGNQVHV------------ENGTDVWHRRLGHPTLSTVKTVLR--LYKPTLSINNSNF--HFCNACSMGKHHNLPFSY--SVTVY
+T S N L V G N V V +N +WH R GH + + + R ++ +NN C C GK LPF T
Subjt: LTHSFNNLSVGSEYGSGNQVHV------------ENGTDVWHRRLGHPTLSTVKTVLR--LYKPTLSINNSNF--HFCNACSMGKHHNLPFSY--SVTVY
Query: SAPLQLVVSDLWGPSYISSKNGYRYYISFVDQ--------------------------------------------------------------------
PL +V SD+ GP + + Y++ FVDQ
Subjt: SAPLQLVVSDLWGPSYISSKNGYRYYISFVDQ--------------------------------------------------------------------
Query: ----NGIAEHKHRHIVDTGLALMSQTSMPLEYWDEAFATAVFLINRLPT--IVFNHVSPLEKLFQTKP
NG++E R I + ++S + +W EA TA +LINR+P+ +V + +P E KP
Subjt: ----NGIAEHKHRHIVDTGLALMSQTSMPLEYWDEAFATAVFLINRLPT--IVFNHVSPLEKLFQTKP
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 5.7e-06 | 31 | Show/hide |
Query: GSGNQVHVENGTDVWHRRLGHPTLSTVKTVLRLYKPTLS-INNSNFHFCNACSMGKHHNLPFSYSVTVYSAPLQLVVSDLWGPSYISSKNGYRYYISFVD
G N E D+WH+R+GH + ++ + + K +S + C+ C GK H + F S L LV SD+ GP I S G +Y+++F+D
Subjt: GSGNQVHVENGTDVWHRRLGHPTLSTVKTVLRLYKPTLS-INNSNFHFCNACSMGKHHNLPFSYSVTVYSAPLQLVVSDLWGPSYISSKNGYRYYISFVD
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.5e-03 | 39.13 | Show/hide |
Query: NGIAEHKHRHIVDTGLALMSQTSMPLEYWDEAFATAVFLINRLPTI
NG+AE +R IV+ +++ +P +W EA TA +LINR P++
Subjt: NGIAEHKHRHIVDTGLALMSQTSMPLEYWDEAFATAVFLINRLPTI
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 1.0e-23 | 31.96 | Show/hide |
Query: WHRRLGHPTLSTVKTVLRLYKPTLSINNSNFHFCNACSMGKHHNLPFSYSVTVYSAPLQLVVSDLWGPSYISSKNGYRYYISFVD---------------
WH RLGHP S + +V+ Y ++ + F C+ C + K + +PFS S + PL+ + SD+W S I S + YRYY+ FVD
Subjt: WHRRLGHPTLSTVKTVLRLYKPTLSINNSNFHFCNACSMGKHHNLPFSYSVTVYSAPLQLVVSDLWGPSYISSKNGYRYYISFVD---------------
Query: -------------------------------------------------------QNGIAEHKHRHIVDTGLALMSQTSMPLEYWDEAFATAVFLINRLP
NG++E KHRHIV+TGL L+S S+P YW AFA AV+LINRLP
Subjt: -------------------------------------------------------QNGIAEHKHRHIVDTGLALMSQTSMPLEYWDEAFATAVFLINRLP
Query: TIVFNHVSPLEKLFQTKPD
T + SP +KLF T P+
Subjt: TIVFNHVSPLEKLFQTKPD
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 2.7e-24 | 22.34 | Show/hide |
Query: TLAKEIWTCLTQIFTTHNLAQIMKIK--TKLQTIQKGG--MSLKEYFSKI--------QQYVDALAAVDKPCTLNLLNLILL----RLILINFPQVLVME
T A +IW L +I+ + + +++ T+ + G M E ++ + +D +AA D P +L ++ L+ +L+ +N +V+ +
Subjt: TLAKEIWTCLTQIFTTHNLAQIMKIK--TKLQTIQKGG--MSLKEYFSKI--------QQYVDALAAVDKPCTLNLLNLILL----RLILINFPQVLVME
Query: IGEVDRGGRGGPSNRGGRG-GHSWNNRNR-----------------------VQCQLCTKFGHTTAKCFFRYAPRFAPMDPGSFSSTYNQFNRFPTF---
V N+ RG ++NN N +CQ+C+ GH+ +C P+ F ST NQ F
Subjt: IGEVDRGGRGGPSNRGGRG-GHSWNNRNR-----------------------VQCQLCTKFGHTTAKCFFRYAPRFAPMDPGSFSSTYNQFNRFPTF---
Query: -PLMFVMVATPNLNQDNNWYPDSGATNHLTHSFNNLSVGSEYGSGNQVHVENGTDV--------------------------------------------
P + V +P NNW DSGAT+H+T FNNLS Y G+ V + +G+ +
Subjt: -PLMFVMVATPNLNQDNNWYPDSGATNHLTHSFNNLSVGSEYGSGNQVHVENGTDV--------------------------------------------
Query: ------------------------------------------------------WHRRLGHPTLSTVKTVLRLYKPTLSINNSNFHFCNACSMGKHHNLP
WH RLGHP+L+ + +V+ + + + C+ C + K H +P
Subjt: ------------------------------------------------------WHRRLGHPTLSTVKTVLRLYKPTLSINNSNFHFCNACSMGKHHNLP
Query: FSYSVTVYSAPLQLVVSDLWGPSYISSKNGYRYYISFVD-------------------------------------------------------------
FS S S PL+ + SD+W +S N YRYY+ FVD
Subjt: FSYSVTVYSAPLQLVVSDLWGPSYISSKNGYRYYISFVD-------------------------------------------------------------
Query: ---------QNGIAEHKHRHIVDTGLALMSQTSMPLEYWDEAFATAVFLINRLPTIVFNHVSPLEKLFQTKPD
NG++E KHRHIV+ GL L+S S+P YW AF+ AV+LINRLPT + SP +KLF P+
Subjt: ---------QNGIAEHKHRHIVDTGLALMSQTSMPLEYWDEAFATAVFLINRLPTIVFNHVSPLEKLFQTKPD
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