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Lag0008198 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0008198
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRT_RNaseH_2 domain-containing protein
Genome locationchr9:14417679..14419096
RNA-Seq ExpressionLag0008198
SyntenyLag0008198
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]2.7e-2435.38Show/hide
Query:  LQFLRTGIADHSWELFCAKPESVNAQVVREFYANIDKEDGFQVIVRGVEVDWSPSAINALYNLQNFPIVAYNE----------------MAVAPSN----
        L F+   I  H+W+ FCA PE     +VREFYAN+       V VRGV+V WS  AINA++ L + P+  ++E                +AVA +     
Subjt:  LQFLRTGIADHSWELFCAKPESVNAQVVREFYANIDKEDGFQVIVRGVEVDWSPSAINALYNLQNFPIVAYNE----------------MAVAPSN----

Query:  ------------EQEANTWMRFIRQRMLPTTHDSTISRERVLLAFTILRSLNIDVGRIMASEISGCWKKKVGKLFFPNTITMLCRRAGNLVDGGDVILFD
                       A  W  F++  +LPTTH  T+S++R+LL  ++L   +I+VGR++ SEI  C  +K G LFFP+ IT LCR A       +  L +
Subjt:  ------------EQEANTWMRFIRQRMLPTTHDSTISRERVLLAFTILRSLNIDVGRIMASEISGCWKKKVGKLFFPNTITMLCRRAGNLVDGGDVILFD

Query:  KGIIDTPNLARL
         G ID   +AR+
Subjt:  KGIIDTPNLARL

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]3.2e-2535.07Show/hide
Query:  LQFLRTGIADHSWELFCAKPESVNAQVVREFYANIDKEDGFQVIVRGVEVDWSPSAINALY--------------NLQNFPIVAYNEMAVAPSNE-----
        L F+   I  H+W+ FCA PE     +VREFYAN+   +   V VRGV+V WS  AINA++              N+    ++   E   A   E     
Subjt:  LQFLRTGIADHSWELFCAKPESVNAQVVREFYANIDKEDGFQVIVRGVEVDWSPSAINALY--------------NLQNFPIVAYNEMAVAPSNE-----

Query:  ------------QEANTWMRFIRQRMLPTTHDSTISRERVLLAFTILRSLNIDVGRIMASEISGCWKKKVGKLFFPNTITMLCRRAGNLVDGGDVILFDK
                      A  W  F++ R+LPTTH  T+S++R+LL  ++L   +I+VGR++ SEI  C  +K G LFFP+ IT LCR A       +  L + 
Subjt:  ------------QEANTWMRFIRQRMLPTTHDSTISRERVLLAFTILRSLNIDVGRIMASEISGCWKKKVGKLFFPNTITMLCRRAGNLVDGGDVILFDK

Query:  GIIDTPNLARL
        G ID   +AR+
Subjt:  GIIDTPNLARL

PON46588.1 hypothetical protein TorRG33x02_325580, partial [Trema orientale]1.3e-1835.68Show/hide
Query:  FLRTGIADHSWELFCAKPESVNAQVVREFYANIDKEDGFQVIVRGVEVDWSPSAINALYNLQNFPIVAYNE------------------MAVAPSN----
        F+   IA H+  LFCA PE     +VREFYAN+   +   V V GV+V  S  AINA++ L + P+  ++E                  +A A SN    
Subjt:  FLRTGIADHSWELFCAKPESVNAQVVREFYANIDKEDGFQVIVRGVEVDWSPSAINALYNLQNFPIVAYNE------------------MAVAPSN----

Query:  ----------EQEANTWMRFIRQRMLPTTHDSTISRERVLLAFTILRSLNIDVGRIMASEISGCWKKKVGKLFFPNTITMLCRRA
                   Q A  W  F+  R+LPTTH   +S+  VLL ++IL   +I+VGRI+  EI     ++ G LFFP+++T LC+ A
Subjt:  ----------EQEANTWMRFIRQRMLPTTHDSTISRERVLLAFTILRSLNIDVGRIMASEISGCWKKKVGKLFFPNTITMLCRRA

PON70375.1 hypothetical protein PanWU01x14_080440 [Parasponia andersonii]1.2e-2134.9Show/hide
Query:  FLRTGIADHSWELFCAKPESVNAQVVREFYANIDKEDGFQVIVRGVEVDWSPSAINALYNLQNFPIVAYNEM----------------------------
        F+   I  H+W+LFCA PE     +VREFY N+   D   V +RGV+V  S  AIN +++L + PI  ++E                             
Subjt:  FLRTGIADHSWELFCAKPESVNAQVVREFYANIDKEDGFQVIVRGVEVDWSPSAINALYNLQNFPIVAYNEM----------------------------

Query:  ----AVAPSNEQEANTWMRFIRQRMLPTTHDSTISRERVLLAFTILRSLNIDVGRIMASEISGCWKKKVGKLFFPNTITMLCR--RAGNLVD
             +  S    A  W  F++ R+LPTTH  T+S+E V L +++L   +I+VGR++  EI  C  +K G LFFP+ IT +CR  RA  LV+
Subjt:  ----AVAPSNEQEANTWMRFIRQRMLPTTHDSTISRERVLLAFTILRSLNIDVGRIMASEISGCWKKKVGKLFFPNTITMLCR--RAGNLVD

PON78020.1 hypothetical protein PanWU01x14_023740 [Parasponia andersonii]1.3e-1834.95Show/hide
Query:  VVREFYANIDKEDGFQVIVRGVEVDWSPSAINALYNLQNFPIVAYNEM--------------AVAPSNEQ------------------EANTWMRFIRQR
        +VREFYAN+   +   + VRGV+V WS  AINA++ L + P+  ++E                VA +  +                   A  W  F++ R
Subjt:  VVREFYANIDKEDGFQVIVRGVEVDWSPSAINALYNLQNFPIVAYNEM--------------AVAPSNEQ------------------EANTWMRFIRQR

Query:  MLPTTHDSTISRERVLLAFTILRSLNIDVGRIMASEISGCWKKKVGKLFFPNTITMLCRRAGNLVDGGDVILFDKGIIDTPNLARL
        +LPTTH   +S++R+LL  ++L   +I+VGR++ SEI  C  +K G LFFP+ IT LCR A  LV+  +  L + G ID   +AR+
Subjt:  MLPTTHDSTISRERVLLAFTILRSLNIDVGRIMASEISGCWKKKVGKLFFPNTITMLCRRAGNLVDGGDVILFDKGIIDTPNLARL

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)1.3e-2435.38Show/hide
Query:  LQFLRTGIADHSWELFCAKPESVNAQVVREFYANIDKEDGFQVIVRGVEVDWSPSAINALYNLQNFPIVAYNE----------------MAVAPSN----
        L F+   I  H+W+ FCA PE     +VREFYAN+       V VRGV+V WS  AINA++ L + P+  ++E                +AVA +     
Subjt:  LQFLRTGIADHSWELFCAKPESVNAQVVREFYANIDKEDGFQVIVRGVEVDWSPSAINALYNLQNFPIVAYNE----------------MAVAPSN----

Query:  ------------EQEANTWMRFIRQRMLPTTHDSTISRERVLLAFTILRSLNIDVGRIMASEISGCWKKKVGKLFFPNTITMLCRRAGNLVDGGDVILFD
                       A  W  F++  +LPTTH  T+S++R+LL  ++L   +I+VGR++ SEI  C  +K G LFFP+ IT LCR A       +  L +
Subjt:  ------------EQEANTWMRFIRQRMLPTTHDSTISRERVLLAFTILRSLNIDVGRIMASEISGCWKKKVGKLFFPNTITMLCRRAGNLVDGGDVILFD

Query:  KGIIDTPNLARL
         G ID   +AR+
Subjt:  KGIIDTPNLARL

A0A2P5BCG4 Uncharacterized protein (Fragment)1.5e-2535.07Show/hide
Query:  LQFLRTGIADHSWELFCAKPESVNAQVVREFYANIDKEDGFQVIVRGVEVDWSPSAINALY--------------NLQNFPIVAYNEMAVAPSNE-----
        L F+   I  H+W+ FCA PE     +VREFYAN+   +   V VRGV+V WS  AINA++              N+    ++   E   A   E     
Subjt:  LQFLRTGIADHSWELFCAKPESVNAQVVREFYANIDKEDGFQVIVRGVEVDWSPSAINALY--------------NLQNFPIVAYNEMAVAPSNE-----

Query:  ------------QEANTWMRFIRQRMLPTTHDSTISRERVLLAFTILRSLNIDVGRIMASEISGCWKKKVGKLFFPNTITMLCRRAGNLVDGGDVILFDK
                      A  W  F++ R+LPTTH  T+S++R+LL  ++L   +I+VGR++ SEI  C  +K G LFFP+ IT LCR A       +  L + 
Subjt:  ------------QEANTWMRFIRQRMLPTTHDSTISRERVLLAFTILRSLNIDVGRIMASEISGCWKKKVGKLFFPNTITMLCRRAGNLVDGGDVILFDK

Query:  GIIDTPNLARL
        G ID   +AR+
Subjt:  GIIDTPNLARL

A0A2P5BCT7 Uncharacterized protein (Fragment)6.2e-1935.68Show/hide
Query:  FLRTGIADHSWELFCAKPESVNAQVVREFYANIDKEDGFQVIVRGVEVDWSPSAINALYNLQNFPIVAYNE------------------MAVAPSN----
        F+   IA H+  LFCA PE     +VREFYAN+   +   V V GV+V  S  AINA++ L + P+  ++E                  +A A SN    
Subjt:  FLRTGIADHSWELFCAKPESVNAQVVREFYANIDKEDGFQVIVRGVEVDWSPSAINALYNLQNFPIVAYNE------------------MAVAPSN----

Query:  ----------EQEANTWMRFIRQRMLPTTHDSTISRERVLLAFTILRSLNIDVGRIMASEISGCWKKKVGKLFFPNTITMLCRRA
                   Q A  W  F+  R+LPTTH   +S+  VLL ++IL   +I+VGRI+  EI     ++ G LFFP+++T LC+ A
Subjt:  ----------EQEANTWMRFIRQRMLPTTHDSTISRERVLLAFTILRSLNIDVGRIMASEISGCWKKKVGKLFFPNTITMLCRRA

A0A2P5DAQ2 Uncharacterized protein6.0e-2234.9Show/hide
Query:  FLRTGIADHSWELFCAKPESVNAQVVREFYANIDKEDGFQVIVRGVEVDWSPSAINALYNLQNFPIVAYNEM----------------------------
        F+   I  H+W+LFCA PE     +VREFY N+   D   V +RGV+V  S  AIN +++L + PI  ++E                             
Subjt:  FLRTGIADHSWELFCAKPESVNAQVVREFYANIDKEDGFQVIVRGVEVDWSPSAINALYNLQNFPIVAYNEM----------------------------

Query:  ----AVAPSNEQEANTWMRFIRQRMLPTTHDSTISRERVLLAFTILRSLNIDVGRIMASEISGCWKKKVGKLFFPNTITMLCR--RAGNLVD
             +  S    A  W  F++ R+LPTTH  T+S+E V L +++L   +I+VGR++  EI  C  +K G LFFP+ IT +CR  RA  LV+
Subjt:  ----AVAPSNEQEANTWMRFIRQRMLPTTHDSTISRERVLLAFTILRSLNIDVGRIMASEISGCWKKKVGKLFFPNTITMLCR--RAGNLVD

A0A2P5DXM3 Uncharacterized protein6.2e-1934.95Show/hide
Query:  VVREFYANIDKEDGFQVIVRGVEVDWSPSAINALYNLQNFPIVAYNEM--------------AVAPSNEQ------------------EANTWMRFIRQR
        +VREFYAN+   +   + VRGV+V WS  AINA++ L + P+  ++E                VA +  +                   A  W  F++ R
Subjt:  VVREFYANIDKEDGFQVIVRGVEVDWSPSAINALYNLQNFPIVAYNEM--------------AVAPSNEQ------------------EANTWMRFIRQR

Query:  MLPTTHDSTISRERVLLAFTILRSLNIDVGRIMASEISGCWKKKVGKLFFPNTITMLCRRAGNLVDGGDVILFDKGIIDTPNLARL
        +LPTTH   +S++R+LL  ++L   +I+VGR++ SEI  C  +K G LFFP+ IT LCR A  LV+  +  L + G ID   +AR+
Subjt:  MLPTTHDSTISRERVLLAFTILRSLNIDVGRIMASEISGCWKKKVGKLFFPNTITMLCRRAGNLVDGGDVILFDKGIIDTPNLARL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAAGACAAGAGCAAGGAAAGAAAGAGAGAGTGAGGAGGAGGAGGTATCGATTACTCCGGAAGTACAAAAAAGGAAAACCAAGAAGAAGAGGACGTTAGAAGAGAA
AGAAGCTAAACGAAGAAGAAGGCAGCAGAGGGCTGCGGAGCAAGAAGCAATCCAAGAAGAAGCAGTGAATGACCCAGATACAGACGAAGTTCAAAATCCTGAGGTAGAAC
CGATAGTCCCGGATACGGTTCAAGAGGAGAATGTTGAGGAAAATCAAGAACAACAGATTGACGAGGTGAGAGACGAGCAGGCGGACGTAGTGCCTAAAAGAGGGAATGAG
CAAGAGCAAGAAGCTCGTGTTGAGGTAATCATGCCCGAACCACCAAAACGACGCCACATTAAGCGGAAGGCTGGGCGTGTTCAGGTGATTCGGACTGATACCCCATCACC
ACCATCGCCGGATTCTGAGAGAGAGATGGCAGAGCAAGAGGAAGAGAGAAAAAAGAAGTTGAAGAAAAGCGGTGATCTTCTGCAGTTTCTAAGGACCGGTATTGCAGACC
ACAGCTGGGAGCTGTTTTGTGCGAAGCCTGAGTCTGTAAACGCGCAGGTGGTGCGCGAATTTTATGCTAACATTGACAAGGAGGATGGTTTCCAGGTGATTGTCCGAGGA
GTCGAGGTAGATTGGAGTCCTAGTGCTATTAACGCACTGTACAATCTTCAGAACTTCCCCATTGTGGCATATAATGAGATGGCTGTGGCGCCATCTAATGAGCAGGAAGC
GAACACATGGATGAGATTTATCAGACAAAGGATGCTTCCAACAACACACGACTCAACAATCTCCAGGGAACGAGTTCTTTTAGCTTTTACAATCTTGCGGTCGCTCAACA
TTGACGTAGGGAGGATCATGGCTAGTGAAATTTCTGGATGTTGGAAAAAGAAAGTGGGGAAACTGTTCTTTCCGAACACAATTACGATGCTTTGCAGAAGAGCAGGGAAT
CTAGTGGATGGGGGGGATGTGATTCTGTTTGACAAGGGAATCATCGACACGCCCAATTTGGCACGGCTCCAGCGCATGCAGGAGGTACGTCAAGGTGGGCTTATCTACGG
CATCAACACATTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGAAGACAAGAGCAAGGAAAGAAAGAGAGAGTGAGGAGGAGGAGGTATCGATTACTCCGGAAGTACAAAAAAGGAAAACCAAGAAGAAGAGGACGTTAGAAGAGAA
AGAAGCTAAACGAAGAAGAAGGCAGCAGAGGGCTGCGGAGCAAGAAGCAATCCAAGAAGAAGCAGTGAATGACCCAGATACAGACGAAGTTCAAAATCCTGAGGTAGAAC
CGATAGTCCCGGATACGGTTCAAGAGGAGAATGTTGAGGAAAATCAAGAACAACAGATTGACGAGGTGAGAGACGAGCAGGCGGACGTAGTGCCTAAAAGAGGGAATGAG
CAAGAGCAAGAAGCTCGTGTTGAGGTAATCATGCCCGAACCACCAAAACGACGCCACATTAAGCGGAAGGCTGGGCGTGTTCAGGTGATTCGGACTGATACCCCATCACC
ACCATCGCCGGATTCTGAGAGAGAGATGGCAGAGCAAGAGGAAGAGAGAAAAAAGAAGTTGAAGAAAAGCGGTGATCTTCTGCAGTTTCTAAGGACCGGTATTGCAGACC
ACAGCTGGGAGCTGTTTTGTGCGAAGCCTGAGTCTGTAAACGCGCAGGTGGTGCGCGAATTTTATGCTAACATTGACAAGGAGGATGGTTTCCAGGTGATTGTCCGAGGA
GTCGAGGTAGATTGGAGTCCTAGTGCTATTAACGCACTGTACAATCTTCAGAACTTCCCCATTGTGGCATATAATGAGATGGCTGTGGCGCCATCTAATGAGCAGGAAGC
GAACACATGGATGAGATTTATCAGACAAAGGATGCTTCCAACAACACACGACTCAACAATCTCCAGGGAACGAGTTCTTTTAGCTTTTACAATCTTGCGGTCGCTCAACA
TTGACGTAGGGAGGATCATGGCTAGTGAAATTTCTGGATGTTGGAAAAAGAAAGTGGGGAAACTGTTCTTTCCGAACACAATTACGATGCTTTGCAGAAGAGCAGGGAAT
CTAGTGGATGGGGGGGATGTGATTCTGTTTGACAAGGGAATCATCGACACGCCCAATTTGGCACGGCTCCAGCGCATGCAGGAGGTACGTCAAGGTGGGCTTATCTACGG
CATCAACACATTCTAG
Protein sequenceShow/hide protein sequence
MAKTRARKERESEEEEVSITPEVQKRKTKKKRTLEEKEAKRRRRQQRAAEQEAIQEEAVNDPDTDEVQNPEVEPIVPDTVQEENVEENQEQQIDEVRDEQADVVPKRGNE
QEQEARVEVIMPEPPKRRHIKRKAGRVQVIRTDTPSPPSPDSEREMAEQEEERKKKLKKSGDLLQFLRTGIADHSWELFCAKPESVNAQVVREFYANIDKEDGFQVIVRG
VEVDWSPSAINALYNLQNFPIVAYNEMAVAPSNEQEANTWMRFIRQRMLPTTHDSTISRERVLLAFTILRSLNIDVGRIMASEISGCWKKKVGKLFFPNTITMLCRRAGN
LVDGGDVILFDKGIIDTPNLARLQRMQEVRQGGLIYGINTF