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Lag0008211 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0008211
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionPMD domain-containing protein
Genome locationchr9:14837617..14841574
RNA-Seq ExpressionLag0008211
SyntenyLag0008211
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034815.1 hypothetical protein E6C27_scaffold213G00490 [Cucumis melo var. makuwa]6.7e-2253.85Show/hide
Query:  WILRSFLHGKKPNVNQELMLGHRIIENQVCWGPLLKFNGEFTHIACYWEWLEFFIARNKKLLQGSGLYAAVIASLYSYDHNKDIVRAFCEA
        W+L+S +H + PN ++ L LG R+IE Q  WG + K  GEF    CYWEWLE  + RN +LL  + LY AV ASLY+YD N D+VRAFCEA
Subjt:  WILRSFLHGKKPNVNQELMLGHRIIENQVCWGPLLKFNGEFTHIACYWEWLEFFIARNKKLLQGSGLYAAVIASLYSYDHNKDIVRAFCEA

KAA0047478.1 hypothetical protein E6C27_scaffold498G00950 [Cucumis melo var. makuwa]8.7e-2253.85Show/hide
Query:  WILRSFLHGKKPNVNQELMLGHRIIENQVCWGPLLKFNGEFTHIACYWEWLEFFIARNKKLLQGSGLYAAVIASLYSYDHNKDIVRAFCEA
        W+L+S +H + PN  + L LG R+IE Q  WG + K  GEF    CYWEWLE  + RN +LL  + LY AV ASLY+YD N D+VRAFCEA
Subjt:  WILRSFLHGKKPNVNQELMLGHRIIENQVCWGPLLKFNGEFTHIACYWEWLEFFIARNKKLLQGSGLYAAVIASLYSYDHNKDIVRAFCEA

KAA0061098.1 putative mitochondrial protein [Cucumis melo var. makuwa]3.9e-2253.85Show/hide
Query:  WILRSFLHGKKPNVNQELMLGHRIIENQVCWGPLLKFNGEFTHIACYWEWLEFFIARNKKLLQGSGLYAAVIASLYSYDHNKDIVRAFCEA
        W+L+SF+H + PN  + L  G R+IE Q  WG + K  GEF    CYWEWLE  + RN +LL  + LY AV ASLY+YD N D+VRAFCEA
Subjt:  WILRSFLHGKKPNVNQELMLGHRIIENQVCWGPLLKFNGEFTHIACYWEWLEFFIARNKKLLQGSGLYAAVIASLYSYDHNKDIVRAFCEA

KAA0063074.1 uncharacterized protein E6C27_scaffold468G001920 [Cucumis melo var. makuwa]1.5e-2153.85Show/hide
Query:  WILRSFLHGKKPNVNQELMLGHRIIENQVCWGPLLKFNGEFTHIACYWEWLEFFIARNKKLLQGSGLYAAVIASLYSYDHNKDIVRAFCEA
        WIL+S +H + PN  + L LG R+I+ Q  WG + K  GEF  I CYWEWLE  + RN +LL  + LY  V ASLY+YD N D+VRAFCEA
Subjt:  WILRSFLHGKKPNVNQELMLGHRIIENQVCWGPLLKFNGEFTHIACYWEWLEFFIARNKKLLQGSGLYAAVIASLYSYDHNKDIVRAFCEA

TYK20969.1 hypothetical protein E5676_scaffold18270G00010 [Cucumis melo var. makuwa]1.5e-2154.95Show/hide
Query:  WILRSFLHGKKPNVNQELMLGHRIIENQVCWGPLLKFNGEFTHIACYWEWLEFFIARNKKLLQGSGLYAAVIASLYSYDHNKDIVRAFCEA
        W+L+S +H + PN  + L LG R+IE Q  WG + K  GEF  I CYWEWLE  + RN +LL  + LY AV ASLY+YD N D+VRAFCEA
Subjt:  WILRSFLHGKKPNVNQELMLGHRIIENQVCWGPLLKFNGEFTHIACYWEWLEFFIARNKKLLQGSGLYAAVIASLYSYDHNKDIVRAFCEA

TrEMBL top hitse value%identityAlignment
A0A5A7T019 PMD domain-containing protein3.2e-2253.85Show/hide
Query:  WILRSFLHGKKPNVNQELMLGHRIIENQVCWGPLLKFNGEFTHIACYWEWLEFFIARNKKLLQGSGLYAAVIASLYSYDHNKDIVRAFCEA
        W+L+S +H + PN ++ L LG R+IE Q  WG + K  GEF    CYWEWLE  + RN +LL  + LY AV ASLY+YD N D+VRAFCEA
Subjt:  WILRSFLHGKKPNVNQELMLGHRIIENQVCWGPLLKFNGEFTHIACYWEWLEFFIARNKKLLQGSGLYAAVIASLYSYDHNKDIVRAFCEA

A0A5A7TX42 Uncharacterized protein4.2e-2253.85Show/hide
Query:  WILRSFLHGKKPNVNQELMLGHRIIENQVCWGPLLKFNGEFTHIACYWEWLEFFIARNKKLLQGSGLYAAVIASLYSYDHNKDIVRAFCEA
        W+L+S +H + PN  + L LG R+IE Q  WG + K  GEF    CYWEWLE  + RN +LL  + LY AV ASLY+YD N D+VRAFCEA
Subjt:  WILRSFLHGKKPNVNQELMLGHRIIENQVCWGPLLKFNGEFTHIACYWEWLEFFIARNKKLLQGSGLYAAVIASLYSYDHNKDIVRAFCEA

A0A5A7U8X8 PMD domain-containing protein7.2e-2254.95Show/hide
Query:  WILRSFLHGKKPNVNQELMLGHRIIENQVCWGPLLKFNGEFTHIACYWEWLEFFIARNKKLLQGSGLYAAVIASLYSYDHNKDIVRAFCEA
        W+L+S +H + PN  + L LG R+IE Q  WG + K  GEF  I CYWEWLE  + RN +LL  + LY AV ASLY+YD N D+VRAFCEA
Subjt:  WILRSFLHGKKPNVNQELMLGHRIIENQVCWGPLLKFNGEFTHIACYWEWLEFFIARNKKLLQGSGLYAAVIASLYSYDHNKDIVRAFCEA

A0A5D3BXQ4 Putative mitochondrial protein1.9e-2253.85Show/hide
Query:  WILRSFLHGKKPNVNQELMLGHRIIENQVCWGPLLKFNGEFTHIACYWEWLEFFIARNKKLLQGSGLYAAVIASLYSYDHNKDIVRAFCEA
        W+L+SF+H + PN  + L  G R+IE Q  WG + K  GEF    CYWEWLE  + RN +LL  + LY AV ASLY+YD N D+VRAFCEA
Subjt:  WILRSFLHGKKPNVNQELMLGHRIIENQVCWGPLLKFNGEFTHIACYWEWLEFFIARNKKLLQGSGLYAAVIASLYSYDHNKDIVRAFCEA

A0A5D3DCE5 PMD domain-containing protein7.2e-2254.95Show/hide
Query:  WILRSFLHGKKPNVNQELMLGHRIIENQVCWGPLLKFNGEFTHIACYWEWLEFFIARNKKLLQGSGLYAAVIASLYSYDHNKDIVRAFCEA
        W+L+S +H + PN  + L LG R+IE Q  WG + K  GEF  I CYWEWLE  + RN +LL  + LY AV ASLY+YD N D+VRAFCEA
Subjt:  WILRSFLHGKKPNVNQELMLGHRIIENQVCWGPLLKFNGEFTHIACYWEWLEFFIARNKKLLQGSGLYAAVIASLYSYDHNKDIVRAFCEA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCGGAGCCTTATTCTTCAGTTCTGCAACTGAATTTGACGAGGATCTAAGCTTCGATCTTCGCGAGTCTACGACACTACTGACGGCCACTATTCCAGCAACCACCCG
ATCTGCAAAGCGCAAGAGGTCGTGGATTGTTGTGGAGCAAGGAGCAACGTTTGATCATCCCCTGATTCAAGCGGAATTTAGGCTGATCACTCGACCTTCACATCTTGCCT
CGGGTAGTGATCAACCCCTGATTCAGGTGAAATTCAGGCTGATCACTCACCTTTCACATTTTTCCTCAGGCAGTGATCAACCACTGATTCAGGCAGAATTCAGGCTGATC
ACTCGCCCTTCACATCCTGCCTCGAGCAGTGATCAACCCCAGATTCAGGCGATATTCAGGATGATCACTCGTCTTTCACCTCCGGTCTCTTGCCCCCTTTCATCCTGCCT
CGAAAGTGATCACCCCTTGATTCAGTCTGTAGAAAAGGCTCAAGGTCAACACTCTTCCACTAAGGTTTGGATTCTACGATCTTTTTTACATGGAAAGAAGCCAAATGTCA
ATCAAGAACTGATGTTGGGACATCGCATCATTGAAAATCAGGTTTGTTGGGGGCCCTTACTGAAATTCAACGGAGAATTTACTCACATTGCTTGTTATTGGGAGTGGCTA
GAATTTTTCATTGCTCGGAACAAGAAACTACTACAAGGCTCTGGTTTATATGCAGCTGTGATAGCTTCTTTATACTCCTACGATCACAACAAGGACATAGTTCGGGCTTT
TTGTGAAGCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGATCGGAGCCTTATTCTTCAGTTCTGCAACTGAATTTGACGAGGATCTAAGCTTCGATCTTCGCGAGTCTACGACACTACTGACGGCCACTATTCCAGCAACCACCCG
ATCTGCAAAGCGCAAGAGGTCGTGGATTGTTGTGGAGCAAGGAGCAACGTTTGATCATCCCCTGATTCAAGCGGAATTTAGGCTGATCACTCGACCTTCACATCTTGCCT
CGGGTAGTGATCAACCCCTGATTCAGGTGAAATTCAGGCTGATCACTCACCTTTCACATTTTTCCTCAGGCAGTGATCAACCACTGATTCAGGCAGAATTCAGGCTGATC
ACTCGCCCTTCACATCCTGCCTCGAGCAGTGATCAACCCCAGATTCAGGCGATATTCAGGATGATCACTCGTCTTTCACCTCCGGTCTCTTGCCCCCTTTCATCCTGCCT
CGAAAGTGATCACCCCTTGATTCAGTCTGTAGAAAAGGCTCAAGGTCAACACTCTTCCACTAAGGTTTGGATTCTACGATCTTTTTTACATGGAAAGAAGCCAAATGTCA
ATCAAGAACTGATGTTGGGACATCGCATCATTGAAAATCAGGTTTGTTGGGGGCCCTTACTGAAATTCAACGGAGAATTTACTCACATTGCTTGTTATTGGGAGTGGCTA
GAATTTTTCATTGCTCGGAACAAGAAACTACTACAAGGCTCTGGTTTATATGCAGCTGTGATAGCTTCTTTATACTCCTACGATCACAACAAGGACATAGTTCGGGCTTT
TTGTGAAGCCTAA
Protein sequenceShow/hide protein sequence
MIGALFFSSATEFDEDLSFDLRESTTLLTATIPATTRSAKRKRSWIVVEQGATFDHPLIQAEFRLITRPSHLASGSDQPLIQVKFRLITHLSHFSSGSDQPLIQAEFRLI
TRPSHPASSSDQPQIQAIFRMITRLSPPVSCPLSSCLESDHPLIQSVEKAQGQHSSTKVWILRSFLHGKKPNVNQELMLGHRIIENQVCWGPLLKFNGEFTHIACYWEWL
EFFIARNKKLLQGSGLYAAVIASLYSYDHNKDIVRAFCEA