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Lag0008216 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0008216
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionIntegrase catalytic domain-containing protein
Genome locationchr9:15106133..15106789
RNA-Seq ExpressionLag0008216
SyntenyLag0008216
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
MBA0753580.1 hypothetical protein [Gossypium gossypioides]2.7e-0854.84Show/hide
Query:  MPITHNSTISVERVMLLYIIMKGLEINIGSIIIEEILSCGRKRARKLFFGSLITQLCQRVKI
        MPI+H+STIS+ER+ LLY IM    INIG II++EI  C RK+    +F SLIT LC R ++
Subjt:  MPITHNSTISVERVMLLYIIMKGLEINIGSIIIEEILSCGRKRARKLFFGSLITQLCQRVKI
MBA0755869.1 hypothetical protein [Gossypium gossypioides]8.7e-0750Show/hide
Query:  MPITHNSTISVERVMLLYIIMKGLEINIGSIIIEEILSCGRKRARKLFFGSLITQLCQRVKI
        MPI+H+STIS+E+++LLY IM    IN G II +EI  C RK+    +F SLIT LC + ++
Subjt:  MPITHNSTISVERVMLLYIIMKGLEINIGSIIIEEILSCGRKRARKLFFGSLITQLCQRVKI
TYG37159.1 hypothetical protein ES288_D13G120000v1 [Gossypium darwinii]5.1e-0750Show/hide
Query:  MPITHNSTISVERVMLLYIIMKGLEINIGSIIIEEILSCGRKRARKLFFGSLITQLCQRVKI
        MPI H+STIS+E+++LLY I+    INIG II++EI  C + +A   +F SLIT LC R ++
Subjt:  MPITHNSTISVERVMLLYIIMKGLEINIGSIIIEEILSCGRKRARKLFFGSLITQLCQRVKI
TYG52543.1 hypothetical protein ES288_D09G036700v1 [Gossypium darwinii]1.3e-0750Show/hide
Query:  MPITHNSTISVERVMLLYIIMKGLEINIGSIIIEEILSCGRKRARKLFFGSLITQLCQRVKI
        MPI+H+STIS+E ++LLY I+    IN+G II++EI +C +K+AR  +F SLIT LC +  +
Subjt:  MPITHNSTISVERVMLLYIIMKGLEINIGSIIIEEILSCGRKRARKLFFGSLITQLCQRVKI
TYH88163.1 hypothetical protein ES332_D01G168900v1 [Gossypium tomentosum]6.6e-0752.63Show/hide
Query:  MPITHNSTISVERVMLLYIIMKGLEINIGSIIIEEILSCGRKRARKLFFGSLITQLC
        MPI+H+ TIS+ER++LLY I+    IN+G II++EI +C +K+A  ++F SLIT LC
Subjt:  MPITHNSTISVERVMLLYIIMKGLEINIGSIIIEEILSCGRKRARKLFFGSLITQLC
TrEMBL top hitse value%identityAlignment
A0A5D1ZYC3 Uncharacterized protein2.5e-0750Show/hide
Query:  MPITHNSTISVERVMLLYIIMKGLEINIGSIIIEEILSCGRKRARKLFFGSLITQLCQRVKI
        MPI H+STIS+E+++LLY I+    INIG II++EI  C + +A   +F SLIT LC R ++
Subjt:  MPITHNSTISVERVMLLYIIMKGLEINIGSIIIEEILSCGRKRARKLFFGSLITQLCQRVKI
A0A5D2B8V0 Uncharacterized protein6.5e-0850Show/hide
Query:  MPITHNSTISVERVMLLYIIMKGLEINIGSIIIEEILSCGRKRARKLFFGSLITQLCQRVKI
        MPI+H+STIS+E ++LLY I+    IN+G II++EI +C +K+AR  +F SLIT LC +  +
Subjt:  MPITHNSTISVERVMLLYIIMKGLEINIGSIIIEEILSCGRKRARKLFFGSLITQLCQRVKI
A0A5D2MA47 Uncharacterized protein3.2e-0752.63Show/hide
Query:  MPITHNSTISVERVMLLYIIMKGLEINIGSIIIEEILSCGRKRARKLFFGSLITQLC
        MPI+H+ TIS+ER++LLY I+    IN+G II++EI +C +K+A  ++F SLIT LC
Subjt:  MPITHNSTISVERVMLLYIIMKGLEINIGSIIIEEILSCGRKRARKLFFGSLITQLC
A0A7J9CYK2 Uncharacterized protein1.3e-0854.84Show/hide
Query:  MPITHNSTISVERVMLLYIIMKGLEINIGSIIIEEILSCGRKRARKLFFGSLITQLCQRVKI
        MPI+H+STIS+ER+ LLY IM    INIG II++EI  C RK+    +F SLIT LC R ++
Subjt:  MPITHNSTISVERVMLLYIIMKGLEINIGSIIIEEILSCGRKRARKLFFGSLITQLCQRVKI
A0A7J9D573 Uncharacterized protein (Fragment)4.2e-0750Show/hide
Query:  MPITHNSTISVERVMLLYIIMKGLEINIGSIIIEEILSCGRKRARKLFFGSLITQLCQRVKI
        MPI+H+STIS+E+++LLY IM    IN G II +EI  C RK+    +F SLIT LC + ++
Subjt:  MPITHNSTISVERVMLLYIIMKGLEINIGSIIIEEILSCGRKRARKLFFGSLITQLCQRVKI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCATAACCCACAATAGTACCATTTCAGTAGAGAGGGTTATGCTTCTCTACATCATCATGAAGGGATTGGAGATTAACATAGGGAGCATCATCATAGAAGAGATCCT
TTCATGTGGAAGGAAGAGAGCAAGGAAGTTGTTCTTTGGGTCACTGATTACCCAATTGTGTCAGAGGGTGAAGATAGTTCCTGGAAAAGATGAAGAACGTCACTTTTACA
AGCCAACCATTGACCTACCTCTAATTGGGAAGCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNTCAACAGAACAATGCCCAAAGAAAGGAAAGGCTTCAACTTCCCAAGCTACTCCACCATCGGGTTTGACACCTGCTTCACCTCCTAA
GCACACTCCTATCTCAGGGCCTACACCATCATCAGAGGCCCTTGCATTCGTCTTCCGACAGCTAGACCGGATCGAAGACAAGCTGAAAGCTTACTGGGTCTATGCTAAGG
AGAGAGATGAAGCTATTAGAGAGTTCTACCTCTCTATCGCCCCTAGCACGCCCCTATGTTCCCTGACTTCCCTCAATCGTTACTGCCTCAAGAAGAGAAAGAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGCCCATAACCCACAATAGTACCATTTCAGTAGAGAGGGTTATGCTTCTCTACATCATCATGAAGGGATTGGAGATTAACATAGGGAGCATCATCATAGAAGAGATCCT
TTCATGTGGAAGGAAGAGAGCAAGGAAGTTGTTCTTTGGGTCACTGATTACCCAATTGTGTCAGAGGGTGAAGATAGTTCCTGGAAAAGATGAAGAACGTCACTTTTACA
AGCCAACCATTGACCTACCTCTAATTGGGAAGCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNTCAACAGAACAATGCCCAAAGAAAGGAAAGGCTTCAACTTCCCAAGCTACTCCACCATCGGGTTTGACACCTGCTTCACCTCCTAA
GCACACTCCTATCTCAGGGCCTACACCATCATCAGAGGCCCTTGCATTCGTCTTCCGACAGCTAGACCGGATCGAAGACAAGCTGAAAGCTTACTGGGTCTATGCTAAGG
AGAGAGATGAAGCTATTAGAGAGTTCTACCTCTCTATCGCCCCTAGCACGCCCCTATGTTCCCTGACTTCCCTCAATCGTTACTGCCTCAAGAAGAGAAAGAGATGA
Protein sequenceShow/hide protein sequence
MPITHNSTISVERVMLLYIIMKGLEINIGSIIIEEILSCGRKRARKLFFGSLITQLCQRVKIVPGKDEERHFYKPTIDLPLIGKLXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXSTEQCPKKGKASTSQATPPSGLTPASPPKHTPISGPTPSSEALAFVFRQLDRIEDKLKAYWVYAKERDEAIREFYLSIAPSTPLCSLTSLNRYCLKKRKR