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Lag0008218 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0008218
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr9:15129294..15129806
RNA-Seq ExpressionLag0008218
SyntenyLag0008218
Gene Ontology termsNA
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022926214.1 uncharacterized protein LOC111433394 [Cucurbita moschata]4.6e-4049.18Show/hide
Query:  MTFAQQDDETLSEAWERFKSLLQRCPHHGLPLCIQLETFYVGLNKNSQILVDSSANGALLRKTYDEAHEILDRIARNNYEWGSAEDRRRRPFKTNSGSFE
        + F Q +D+TLSEAWERFK +L++CPHHGLP CIQ+ETFY GLN  ++ +VD+SANGA+L KTY+EA+EIL+RIA NN +W    D R  P +   G  E
Subjt:  MTFAQQDDETLSEAWERFKSLLQRCPHHGLPLCIQLETFYVGLNKNSQILVDSSANGALLRKTYDEAHEILDRIARNNYEWGSAEDRRRRPFKTNSGSFE

Query:  VEPMTSVNAKIEALT-------LKMDALTAS---TAPLIAQLNAVGCGICGEGHTHDQCPSNPEAVLYVG---AQGVTRNNPY
        V+ ++S+NA++ ++T       L  D++  +   T  +I Q  A  C  CGE HT DQCPSNP ++ YVG   +QG  +NNP+
Subjt:  VEPMTSVNAKIEALT-------LKMDALTAS---TAPLIAQLNAVGCGICGEGHTHDQCPSNPEAVLYVG---AQGVTRNNPY

XP_022929949.1 uncharacterized protein LOC111436411 [Cucurbita moschata]1.3e-3950.27Show/hide
Query:  MTFAQQDDETLSEAWERFKSLLQRCPHHGLPLCIQLETFYVGLNKNSQILVDSSANGALLRKTYDEAHEILDRIARNNYEWGSAEDRRRRPFKTNSGSFE
        +TF Q +DETLSEA ERFK +L++CPHHGLP CIQ+ETFY GLN  ++ +VD+SANGA+L KTY+EA+EIL+RIA NN +W    D R  P +   G  E
Subjt:  MTFAQQDDETLSEAWERFKSLLQRCPHHGLPLCIQLETFYVGLNKNSQILVDSSANGALLRKTYDEAHEILDRIARNNYEWGSAEDRRRRPFKTNSGSFE

Query:  VEPMTSVNAKIEALT-------LKMDALTAS---TAPLIAQLNAVGCGICGEGHTHDQCPSNPEAVLYVG---AQGVTRNNPY
        V+ ++S+NA++ ++T       L  D++  +   TA  I Q  A  C  CGE HT DQCPSNP ++ YVG   +QG  +NNP+
Subjt:  VEPMTSVNAKIEALT-------LKMDALTAS---TAPLIAQLNAVGCGICGEGHTHDQCPSNPEAVLYVG---AQGVTRNNPY

XP_022960432.1 uncharacterized protein LOC111461168 [Cucurbita moschata]1.0e-3949.45Show/hide
Query:  MTFAQQDDETLSEAWERFKSLLQRCPHHGLPLCIQLETFYVGLNKNSQILVDSSANGALLRKTYDEAHEILDRIARNNYEWGSAEDRRRRPFKTNSGSFE
        + F Q +DETLSEAWERFK +L++CPHHGLP CIQ+ETFY GLN  ++ +VD+SANGA+L KTY+EA+EIL+RIA NN +W    D R  P K   G  E
Subjt:  MTFAQQDDETLSEAWERFKSLLQRCPHHGLPLCIQLETFYVGLNKNSQILVDSSANGALLRKTYDEAHEILDRIARNNYEWGSAEDRRRRPFKTNSGSFE

Query:  VEPMTSVNAKIEALTLKMDALT----------ASTAPLIAQLNAVGCGICGEGHTHDQCPSNPEAVLYV---GAQGVTRNNP
        V+ ++S+NA++ ++T  +  L           A TA ++ Q     C  CGE HT DQCP NP ++LYV    +QG  +NNP
Subjt:  VEPMTSVNAKIEALTLKMDALT----------ASTAPLIAQLNAVGCGICGEGHTHDQCPSNPEAVLYV---GAQGVTRNNP

XP_030497851.1 uncharacterized protein LOC115713509 [Cannabis sativa]1.3e-3950Show/hide
Query:  MTFAQQDDETLSEAWERFKSLLQRCPHHGLPLCIQLETFYVGLNKNSQILVDSSANGALLRKTYDEAHEILDRIARNNYEWGSAEDRRRRPFKTNSGSFE
        M+F Q +DET S+ WERFK LL++CPHHG+P CIQLETFY GLN  S++++D+SANGA+L K+Y+EA EIL+RIA NNY+W +    R    +  +G  E
Subjt:  MTFAQQDDETLSEAWERFKSLLQRCPHHGLPLCIQLETFYVGLNKNSQILVDSSANGALLRKTYDEAHEILDRIARNNYEWGSAEDRRRRPFKTNSGSFE

Query:  VEPMTSVNAKIEALT--LKMDALTASTAPLIA-QLNAVGCGICGEGHTHDQCPSNPEAVLYVGAQGVTR-NNPY
        V+ +T++ A++ ++T  LK   +  S  P++A Q   + C  CG+GHT + CPSNP +V YVG Q   R NNPY
Subjt:  VEPMTSVNAKIEALT--LKMDALTASTAPLIA-QLNAVGCGICGEGHTHDQCPSNPEAVLYVGAQGVTR-NNPY

XP_030509259.1 uncharacterized protein LOC115723937 [Cannabis sativa]1.8e-3950.57Show/hide
Query:  MTFAQQDDETLSEAWERFKSLLQRCPHHGLPLCIQLETFYVGLNKNSQILVDSSANGALLRKTYDEAHEILDRIARNNYEWGSAEDRRRRPFKTNSGSFE
        M+F Q +DET S+AWERFK LL++CPHHG+P CIQLETFY GLN  S++++D+SANGA+L K+Y+EA EIL+RIA NNY+W +    R    +  +G  E
Subjt:  MTFAQQDDETLSEAWERFKSLLQRCPHHGLPLCIQLETFYVGLNKNSQILVDSSANGALLRKTYDEAHEILDRIARNNYEWGSAEDRRRRPFKTNSGSFE

Query:  VEPMTSVNAKIEALT--LKMDALTASTAPLIA-QLNAVGCGICGEGHTHDQCPSNPEAVLYVGAQGVTR-NNPY
        V+ +T++ A++ ++T  LK   +  S  P  A Q   + C  CG+GHT + CPSNP +V YVG Q   R NNPY
Subjt:  VEPMTSVNAKIEALT--LKMDALTASTAPLIA-QLNAVGCGICGEGHTHDQCPSNPEAVLYVGAQGVTR-NNPY

TrEMBL top hitse value%identityAlignment
A0A6J1EEI2 uncharacterized protein LOC1114333942.2e-4049.18Show/hide
Query:  MTFAQQDDETLSEAWERFKSLLQRCPHHGLPLCIQLETFYVGLNKNSQILVDSSANGALLRKTYDEAHEILDRIARNNYEWGSAEDRRRRPFKTNSGSFE
        + F Q +D+TLSEAWERFK +L++CPHHGLP CIQ+ETFY GLN  ++ +VD+SANGA+L KTY+EA+EIL+RIA NN +W    D R  P +   G  E
Subjt:  MTFAQQDDETLSEAWERFKSLLQRCPHHGLPLCIQLETFYVGLNKNSQILVDSSANGALLRKTYDEAHEILDRIARNNYEWGSAEDRRRRPFKTNSGSFE

Query:  VEPMTSVNAKIEALT-------LKMDALTAS---TAPLIAQLNAVGCGICGEGHTHDQCPSNPEAVLYVG---AQGVTRNNPY
        V+ ++S+NA++ ++T       L  D++  +   T  +I Q  A  C  CGE HT DQCPSNP ++ YVG   +QG  +NNP+
Subjt:  VEPMTSVNAKIEALT-------LKMDALTAS---TAPLIAQLNAVGCGICGEGHTHDQCPSNPEAVLYVG---AQGVTRNNPY

A0A6J1EQ90 uncharacterized protein LOC1114364116.5e-4050.27Show/hide
Query:  MTFAQQDDETLSEAWERFKSLLQRCPHHGLPLCIQLETFYVGLNKNSQILVDSSANGALLRKTYDEAHEILDRIARNNYEWGSAEDRRRRPFKTNSGSFE
        +TF Q +DETLSEA ERFK +L++CPHHGLP CIQ+ETFY GLN  ++ +VD+SANGA+L KTY+EA+EIL+RIA NN +W    D R  P +   G  E
Subjt:  MTFAQQDDETLSEAWERFKSLLQRCPHHGLPLCIQLETFYVGLNKNSQILVDSSANGALLRKTYDEAHEILDRIARNNYEWGSAEDRRRRPFKTNSGSFE

Query:  VEPMTSVNAKIEALT-------LKMDALTAS---TAPLIAQLNAVGCGICGEGHTHDQCPSNPEAVLYVG---AQGVTRNNPY
        V+ ++S+NA++ ++T       L  D++  +   TA  I Q  A  C  CGE HT DQCPSNP ++ YVG   +QG  +NNP+
Subjt:  VEPMTSVNAKIEALT-------LKMDALTAS---TAPLIAQLNAVGCGICGEGHTHDQCPSNPEAVLYVG---AQGVTRNNPY

A0A6J1G7Q6 uncharacterized protein LOC1114515984.0e-3747.25Show/hide
Query:  MTFAQQDDETLSEAWERFKSLLQRCPHHGLPLCIQLETFYVGLNKNSQILVDSSANGALLRKTYDEAHEILDRIARNNYEWGSAEDRRRRPFKTNSGSFE
        + F + ++ETLSEAWERFK  L++CPHHGLP CIQ+ETFY GLN  ++ +VD+SANG +L KTY+EA+EIL+RIA NN +W    D R  P K      E
Subjt:  MTFAQQDDETLSEAWERFKSLLQRCPHHGLPLCIQLETFYVGLNKNSQILVDSSANGALLRKTYDEAHEILDRIARNNYEWGSAEDRRRRPFKTNSGSFE

Query:  VEPMTSVNAKIEALTLKMDALT----------ASTAPLIAQLNAVGCGICGEGHTHDQCPSNPEAVLYVG---AQGVTRNNP
        V+ ++S+NA++ ++T  +  L           A TA ++ Q     C  CGE HT DQCPSNP ++ YVG   +QG  + NP
Subjt:  VEPMTSVNAKIEALTLKMDALT----------ASTAPLIAQLNAVGCGICGEGHTHDQCPSNPEAVLYVG---AQGVTRNNP

A0A6J1H7E4 uncharacterized protein LOC1114611685.0e-4049.45Show/hide
Query:  MTFAQQDDETLSEAWERFKSLLQRCPHHGLPLCIQLETFYVGLNKNSQILVDSSANGALLRKTYDEAHEILDRIARNNYEWGSAEDRRRRPFKTNSGSFE
        + F Q +DETLSEAWERFK +L++CPHHGLP CIQ+ETFY GLN  ++ +VD+SANGA+L KTY+EA+EIL+RIA NN +W    D R  P K   G  E
Subjt:  MTFAQQDDETLSEAWERFKSLLQRCPHHGLPLCIQLETFYVGLNKNSQILVDSSANGALLRKTYDEAHEILDRIARNNYEWGSAEDRRRRPFKTNSGSFE

Query:  VEPMTSVNAKIEALTLKMDALT----------ASTAPLIAQLNAVGCGICGEGHTHDQCPSNPEAVLYV---GAQGVTRNNP
        V+ ++S+NA++ ++T  +  L           A TA ++ Q     C  CGE HT DQCP NP ++LYV    +QG  +NNP
Subjt:  VEPMTSVNAKIEALTLKMDALT----------ASTAPLIAQLNAVGCGICGEGHTHDQCPSNPEAVLYV---GAQGVTRNNP

U5CUI2 Retrotrans_gag domain-containing protein3.0e-3747.06Show/hide
Query:  MTFAQQDDETLSEAWERFKSLLQRCPHHGLPLCIQLETFYVGLNKNSQILVDSSANGALLRKTYDEAHEILDRIARNNYEWGSAEDRRRRPFKTNSGSFE
        M+F Q +DE+ S+AWERFK LL++CPHHG+P CIQ+ETFY GLN  S++++D+SANGA+L K+Y+EA EIL+ IA NNY+W +    R    +  +G  E
Subjt:  MTFAQQDDETLSEAWERFKSLLQRCPHHGLPLCIQLETFYVGLNKNSQILVDSSANGALLRKTYDEAHEILDRIARNNYEWGSAEDRRRRPFKTNSGSFE

Query:  VEPMTSVNAKIEALTLKMDALTASTAPLI-----AQLNAVGCGICGEGHTHDQCPSNPEAVLYVGAQGVT
        V+ +T++ A++ ++T  +  L+   A  I      Q + V C  CGEGH  ++CPSNPE+V Y+G Q +T
Subjt:  VEPMTSVNAKIEALTLKMDALTASTAPLI-----AQLNAVGCGICGEGHTHDQCPSNPEAVLYVGAQGVT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACATTTGCGCAACAAGATGATGAAACATTGAGCGAAGCTTGGGAACGATTCAAGAGCCTGCTACAAAGATGCCCGCATCATGGTTTACCACTGTGCATTCAGCTAGA
AACTTTCTACGTGGGTCTTAACAAGAATTCACAAATCTTGGTAGACTCATCCGCAAATGGTGCACTACTCAGAAAAACATATGATGAAGCCCATGAAATTCTAGATCGAA
TTGCACGAAATAATTATGAGTGGGGATCTGCGGAAGATAGGCGACGAAGACCATTTAAGACTAATTCAGGAAGTTTTGAAGTAGAGCCTATGACATCAGTAAACGCAAAA
ATTGAAGCGTTGACCTTAAAAATGGATGCGCTCACAGCCAGCACCGCACCTTTGATCGCACAACTCAACGCAGTTGGATGCGGAATTTGCGGTGAAGGACACACACATGA
TCAATGTCCTTCAAACCCAGAAGCAGTTCTATATGTGGGAGCGCAAGGAGTGACGCGCAACAACCCATATTAG
mRNA sequenceShow/hide mRNA sequence
ATGACATTTGCGCAACAAGATGATGAAACATTGAGCGAAGCTTGGGAACGATTCAAGAGCCTGCTACAAAGATGCCCGCATCATGGTTTACCACTGTGCATTCAGCTAGA
AACTTTCTACGTGGGTCTTAACAAGAATTCACAAATCTTGGTAGACTCATCCGCAAATGGTGCACTACTCAGAAAAACATATGATGAAGCCCATGAAATTCTAGATCGAA
TTGCACGAAATAATTATGAGTGGGGATCTGCGGAAGATAGGCGACGAAGACCATTTAAGACTAATTCAGGAAGTTTTGAAGTAGAGCCTATGACATCAGTAAACGCAAAA
ATTGAAGCGTTGACCTTAAAAATGGATGCGCTCACAGCCAGCACCGCACCTTTGATCGCACAACTCAACGCAGTTGGATGCGGAATTTGCGGTGAAGGACACACACATGA
TCAATGTCCTTCAAACCCAGAAGCAGTTCTATATGTGGGAGCGCAAGGAGTGACGCGCAACAACCCATATTAG
Protein sequenceShow/hide protein sequence
MTFAQQDDETLSEAWERFKSLLQRCPHHGLPLCIQLETFYVGLNKNSQILVDSSANGALLRKTYDEAHEILDRIARNNYEWGSAEDRRRRPFKTNSGSFEVEPMTSVNAK
IEALTLKMDALTASTAPLIAQLNAVGCGICGEGHTHDQCPSNPEAVLYVGAQGVTRNNPY