| GenBank top hits | e value | %identity | Alignment |
|---|
| CAN67403.1 hypothetical protein VITISV_025614 [Vitis vinifera] | 7.0e-59 | 28.51 | Show/hide |
Query: QVNPNYLVWQKYNRILMSWMYSSLNEDKTGEIIGCGFAFEIWEHLRVVYESSSTARLMALRSQLQKVRKDSLTMSKYLAKIKDITYQFAAIGEPLSYRDH
+ NP++++W++++R+++SW+YSSL + G+I+G + W L ++ +SS AR+M LR + Q RK SLTM +Y+ K+K + AAIGEP++ RD
Subjt: QVNPNYLVWQKYNRILMSWMYSSLNEDKTGEIIGCGFAFEIWEHLRVVYESSSTARLMALRSQLQKVRKDSLTMSKYLAKIKDITYQFAAIGEPLSYRDH
Query: LVYILEGLRSEYNPFVTSIQNRTDRPFLADVRSLLL--------AYVDHKLCAPPKWPNNNSTS--------------------------PHCQICGKLG
++ +L GL ++YN V S+ PF + ++ L + L P NN S P CQ+CGK G
Subjt: LVYILEGLRSEYNPFVTSIQNRTDRPFLADVRSLLL--------AYVDHKLCAPPKWPNNNSTS--------------------------PHCQICGKLG
Query: HTALVCYNRHNPLYHASNPPTPQAFFTQVQSSTNSTSSSAATPDNASHFYFSTPSPHPNESWFMDSRETHHVTPDATNLQQSSVYYGNELVVIDNRKI--
HT + CY+R + + NP + ++ ++ N ++PS +E+WF D+ THH++ L Y GN+ V++ N
Subjt: HTALVCYNRHNPLYHASNPPTPQAFFTQVQSSTNSTSSSAATPDNASHFYFSTPSPHPNESWFMDSRETHHVTPDATNLQQSSVYYGNELVVIDNRKI--
Query: -------------FFPRQS-----------FFGVILMGVSK----------SSPTFHIGLLVSRV-------SLLFFYQP----FKMFSCGI--PVRPSD
+ P Q+ G+ L+ + + F I L ++V +LF P FK+F C +RP +
Subjt: -------------FFPRQS-----------FFGVILMGVSK----------SSPTFHIGLLVSRV-------SLLFFYQP----FKMFSCGI--PVRPSD
Query: ISNCSKSAKN------FSSHKGNLCLDLSSGKSFVSRHVVFNESVFPFQSNSVKAPMSVYQTFPNYFFPPDS---LMSLSSFTPSPLNINPVSPTSLSIT
+ S + S+HKG +CL+ +G+ +V+RHVVF+E+VFPFQS ++ V T P F P S + SL S T + P++ S
Subjt: ISNCSKSAKN------FSSHKGNLCLDLSSGKSFVSRHVVFNESVFPFQSNSVKAPMSVYQTFPNYFFPPDS---LMSLSSFTPSPLNINPVSPTSLSIT
Query: SSPTITELNDQN-QASSPSPDPPTPTFSSDQS--------FPSHHTSPASLPSSMPPS-------------------PILSSPSQSYRV----CHPLHLL
S P + ++ + S P P P + ++ F SH + P + ++ S ++ PS + + L
Subjt: SSPTITELNDQN-QASSPSPDPPTPTFSSDQS--------FPSHHTSPASLPSSMPPS-------------------PILSSPSQSYRV----CHPLHLL
Query: AQLHLFQFSSSYLAQGYTQAYGIDYFETFSPVVKSATIRIVLSLAVTNNWTVRQLDVHNAFLHGDLKEEVFMRQPASFEDPFFPNHVLLLH
+ ++ + +AQG+TQ G++YFETFSPVVK++TIRI+L++A++ NW+V QLDV NAFLHGDL+E VFM+QP F + +P+HV L+
Subjt: AQLHLFQFSSSYLAQGYTQAYGIDYFETFSPVVKSATIRIVLSLAVTNNWTVRQLDVHNAFLHGDLKEEVFMRQPASFEDPFFPNHVLLLH
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| CAN71553.1 hypothetical protein VITISV_034738 [Vitis vinifera] | 7.2e-48 | 24.8 | Show/hide |
Query: VAQTQVNPNYLVWQKYNRILMSWMYSSLNEDKTGEIIGCGFAFEIWEHLRVVYESSSTARLMALRSQLQKVRKDSLTMSKYLAKIKDITYQFAAIGEPLS
++ +VNP++LVW++Y+R+++SW+YSSL + G+I+G + E W L+ + +S+ AR M LR Q +K SLTM +Y+ K+K I+ AAIGEP+
Subjt: VAQTQVNPNYLVWQKYNRILMSWMYSSLNEDKTGEIIGCGFAFEIWEHLRVVYESSSTARLMALRSQLQKVRKDSLTMSKYLAKIKDITYQFAAIGEPLS
Query: YRDHLVYILEGLRSEYNPFVTSIQNRTDRPFLADVRSLLLAY-----------VDHKLCA----------------------------------------
+D ++ +L GL +EYNP V S+ R D L V S+LL + + L A
Subjt: YRDHLVYILEGLRSEYNPFVTSIQNRTDRPFLADVRSLLLAY-----------VDHKLCA----------------------------------------
Query: ------PPKWPNNNSTS---PHCQICGKLGHTALVCYNRHNPLYHASNPPTPQAFFTQVQSSTNSTSSSAATPDNASHFYFSTPSPHPNESWFMDSRETH
P ++ NN S + P CQ+CGK GH L CY+R + Y P +STS TP + + PS +SWF+DS TH
Subjt: ------PPKWPNNNSTS---PHCQICGKLGHTALVCYNRHNPLYHASNPPTPQAFFTQVQSSTNSTSSSAATPDNASHFYFSTPSPHPNESWFMDSRETH
Query: HVTPDATNLQQSSVYYGNELVVI---------DNRKIF-FPRQSFF------------------------------------------------------
H++ A N+ + Y G + V++ DN I F SFF
Subjt: HVTPDATNLQQSSVYYGNELVVI---------DNRKIF-FPRQSFF------------------------------------------------------
Query: ----GVILMGV------------------------------------------------------------SKSSPTFHIGLLVSRVSLLFFYQPFKMFS
GVIL + K T H G ++ L + FS
Subjt: ----GVILMGV------------------------------------------------------------SKSSPTFHIGLLVSRVSLLFFYQPFKMFS
Query: CG--------------------------------------------IPVRPSDISN------------------------CSKSAKNFS-----------
C I PS + N C K+ +
Subjt: CG--------------------------------------------IPVRPSDISN------------------------CSKSAKNFS-----------
Query: -------SHKGNLCLDLSSGKSFVSRHVVFNESVFPFQSNSVKAPMSVY-QTFPNYFFPPDSLM---SLSSFTPSPLNINPVSPTSLSITSSPTI-----
SHKG LCL+ ++ + ++SRHVVF E+ FPFQ+ S + S + P + PP ++ + SS +P P SP + S++ P I
Subjt: -------SHKGNLCLDLSSGKSFVSRHVVFNESVFPFQSNSVKAPMSVY-QTFPNYFFPPDSLM---SLSSFTPSPLNINPVSPTSLSITSSPTI-----
Query: ---TELNDQNQASSPSPDPPTPTFSSDQS--------FPSHHTSPASLPSSMPPSPILSSPSQSYRV--------------------CHPLHLLAQL---
E + S +P P P + +S S P ++ ++ + Q Y+ C + L
Subjt: ---TELNDQNQASSPSPDPPTPTFSSDQS--------FPSHHTSPASLPSSMPPSPILSSPSQSYRV--------------------CHPLHLLAQL---
Query: HLFQFSSSYLAQGYTQAYGIDYFETFSPVVKSATIRIVLSLAVTNNWTVRQLDVHNAFLHGDLKEEVFMRQPASFEDPFFPNHVLLL
+ ++ + +AQG+ Q YGID+FETFSPVVK TIR+VLS+AV++NW ++QLDVHNAFL+GDL+E+VFM QP FED P HV L
Subjt: HLFQFSSSYLAQGYTQAYGIDYFETFSPVVKSATIRIVLSLAVTNNWTVRQLDVHNAFLHGDLKEEVFMRQPASFEDPFFPNHVLLL
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| CAN75478.1 hypothetical protein VITISV_020209 [Vitis vinifera] | 9.7e-53 | 29.09 | Show/hide |
Query: VAQTQVNPNYLVWQKYNRILMSWMYSSLNEDKTGEIIGCGFAFEIWEHLRVVYESSSTARLMALRSQLQKVRKDSLTMSKYLAKIKDITYQFAAIGEPLS
++ +VNP++LV ++Y+R+++SW+YSSL D +I+G + E W L+ + +S+ AR M LR Q +K SLTM +Y+ K+K I+ AAIGEP+
Subjt: VAQTQVNPNYLVWQKYNRILMSWMYSSLNEDKTGEIIGCGFAFEIWEHLRVVYESSSTARLMALRSQLQKVRKDSLTMSKYLAKIKDITYQFAAIGEPLS
Query: YRDHLVYILEGLRSEYNPFVTSIQNRTDRPFLADVRSLLLAYVDHKLCAPPKWPNNNSTSPHCQICGKLGHTALVCYNRHN-PLYHASNPPT----PQAF
+D ++ +L GL +EYNP V S+ R D L V S+LL + + +L H Q + + HN P SN P+ PQ+F
Subjt: YRDHLVYILEGLRSEYNPFVTSIQNRTDRPFLADVRSLLLAYVDHKLCAPPKWPNNNSTSPHCQICGKLGHTALVCYNRHN-PLYHASNPPT----PQAF
Query: FTQVQSST------------------NSTSSSAATPD-----NASHFYFSTPSPHPNESWFMDSRETHHVTPDATNLQQSSVYYGNELVVIDN-------
++ T N+ S + P H FS H + + R THH++ A N+ + Y G + V++ N
Subjt: FTQVQSST------------------NSTSSSAATPD-----NASHFYFSTPSPHPNESWFMDSRETHHVTPDATNLQQSSVYYGNELVVIDN-------
Query: --------RKI----------------FFPRQSFFGVILMGVSKSSPTFHIGLLVSRVSLLFFYQP----FKMFSCGIPVRPSDISNCSKSAKN------
R + F+P +F + + SP + S SLL+ + P FK+F C +++ ++
Subjt: --------RKI----------------FFPRQSFFGVILMGVSKSSPTFHIGLLVSRVSLLFFYQP----FKMFSCGIPVRPSDISNCSKSAKN------
Query: --FSSHKGNLCLDLSSGKSFVSRHVVFNESVFPFQSNSVKAPMSVY-QTFPNYFFPPDSLM---SLSSFTPSPLNINPVSPTSLSITSSPTI--------
SHKG LCL+ ++ + ++SRHVVF E+ FPFQ+ S + S + P + PP ++ + SS +P P SP + S++ P I
Subjt: --FSSHKGNLCLDLSSGKSFVSRHVVFNESVFPFQSNSVKAPMSVY-QTFPNYFFPPDSLM---SLSSFTPSPLNINPVSPTSLSITSSPTI--------
Query: TELNDQNQASSPSPDPPTPTFSSDQS--------FPSHHTSPASLPSSMPPSPILSSPSQSYRV--------------------CHPLHLLAQL---HLF
E + S +P P P + +S S P ++ ++ + Q Y+ C + L +
Subjt: TELNDQNQASSPSPDPPTPTFSSDQS--------FPSHHTSPASLPSSMPPSPILSSPSQSYRV--------------------CHPLHLLAQL---HLF
Query: QFSSSYLAQGYTQAYGIDYFETFSPVVKSATIRIVLSLAVTNNWTVRQLDVHNAFLHGDLKEEVFMRQPASFEDPFFPNHVLLL
++ + +AQG+ Q YGID+FETFSPVVK TIR+VLS+AV++NW ++QLDVHNAFL+GDL+E+VFM QP FED P HV L
Subjt: QFSSSYLAQGYTQAYGIDYFETFSPVVKSATIRIVLSLAVTNNWTVRQLDVHNAFLHGDLKEEVFMRQPASFEDPFFPNHVLLL
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| RVW69807.1 Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera] | 1.7e-49 | 41.75 | Show/hide |
Query: APIQFLDVAQTQVNPNYLVWQKYNRILMSWMYSSLNEDKTGEIIGCGFAFEIWEHLRVVYESSSTARLMALRSQLQKVRKDSLTMSKYLAKIKDITYQFA
+P ++LD A QVNP ++ W + N+++MSW+YSSL G+I+ A +IW L YES S A +M+L SQLQ+++K + +S+YL+++K + +FA
Subjt: APIQFLDVAQTQVNPNYLVWQKYNRILMSWMYSSLNEDKTGEIIGCGFAFEIWEHLRVVYESSSTARLMALRSQLQKVRKDSLTMSKYLAKIKDITYQFA
Query: AIGEPLSYRDHLVYILEGLRSEYNPFVTSIQNRTDRPFLADVRSLLLAY--------VDHKLCAP---PKWPNNNSTSPHCQICGKLGHTALVCYNRHNP
IGEPLSYRD L ILEGL EY+ FVTSI NR+DRP L +V SLL Y +D L P P+ P N++ P CQICGK GH AL Y+R N
Subjt: AIGEPLSYRDHLVYILEGLRSEYNPFVTSIQNRTDRPFLADVRSLLLAY--------VDHKLCAP---PKWPNNNSTSPHCQICGKLGHTALVCYNRHNP
Query: LYHASNPPTPQAFFTQVQSSTNSTSSSAATPDNASHFYFSTPSPHPNESWFMDSRETHHVTPDATNLQQSSVYYGNELVVIDNRK
YH P AF T+S S+ T A S S + SW+MDS THH TP+ ++ + Y + ++ N K
Subjt: LYHASNPPTPQAFFTQVQSSTNSTSSSAATPDNASHFYFSTPSPHPNESWFMDSRETHHVTPDATNLQQSSVYYGNELVVIDNRK
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| XP_022155181.1 uncharacterized protein LOC111022315 [Momordica charantia] | 2.6e-61 | 43.33 | Show/hide |
Query: PIQFLDVAQTQVNPNYLVWQKYNRILMSWMYSSLNEDKTGEIIGCGFAFEIWEHLRVVYESSSTARLMALRSQLQKVRKDSLTMSKYLAKIKDITYQFAA
P QFLD Q Q NP Y W++YNR+LM W+YSSL+E+K GE++ +IW L VY+S +TAR+M L+++LQ +RKD ++S+YLAKIK+I +FAA
Subjt: PIQFLDVAQTQVNPNYLVWQKYNRILMSWMYSSLNEDKTGEIIGCGFAFEIWEHLRVVYESSSTARLMALRSQLQKVRKDSLTMSKYLAKIKDITYQFAA
Query: IGEPLSYRDHLVYILEGLRSEYNPFVTSIQNRTDRPFLADVRSLLLAY------------------------VDHKLCAPP-------------------
+GEPLSYRDHL ++L+GL SEYN FVTSI NR D P L DVRSLLLAY + H PP
Subjt: IGEPLSYRDHLVYILEGLRSEYNPFVTSIQNRTDRPFLADVRSLLLAY------------------------VDHKLCAPP-------------------
Query: ---------------KWPNNNSTSP-HCQICGKLGHTALVCYNRHNPLYHASNPPTPQAFFTQVQSSTNSTSSSAATPDNASHFYFSTPSPHPNESWFMD
KWP S+S CQICGKLGH+A VCY+R N YH + +PQA + VQ S SS H + HP+ESWFMD
Subjt: ---------------KWPNNNSTSP-HCQICGKLGHTALVCYNRHNPLYHASNPPTPQAFFTQVQSSTNSTSSSAATPDNASHFYFSTPSPHPNESWFMD
Query: SRETHHVTPDATNLQQSSVYYGNELVVIDN
S THH+TPD++ L + Y G E V + N
Subjt: SRETHHVTPDATNLQQSSVYYGNELVVIDN
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A2N9GWM4 Uncharacterized protein | 1.1e-49 | 25.61 | Show/hide |
Query: INGT-PAPIQFLDVAQTQV-----NPNYLVWQKYNRILMSWMYSSLNEDKTGEIIGCGFAFEIWEHLRVVYESSSTARLMALRSQLQKVRKDSLTMSKYL
I+GT PAP L V+ + NP + W +++++S + SSL+E ++ C + ++W L ++ S S AR M L QL ++K +M+ +
Subjt: INGT-PAPIQFLDVAQTQV-----NPNYLVWQKYNRILMSWMYSSLNEDKTGEIIGCGFAFEIWEHLRVVYESSSTARLMALRSQLQKVRKDSLTMSKYL
Query: AKIKDITYQFAAIGEPLSYRDHLVYILEGLRSEYNPFVTSIQNRTDRPFLADVRSLLLAY----------VDHKLCAP----------------------
K + AAI +PL D + + L GL S+Y+ VT+IQ R L ++ L++ VD L +
Subjt: AKIKDITYQFAAIGEPLSYRDHLVYILEGLRSEYNPFVTSIQNRTDRPFLADVRSLLLAY----------VDHKLCAP----------------------
Query: ------------------PKWPNNNSTSPHCQICGKLGHTALVCYNRHNPLYHASNPPTPQAFFTQVQSSTNSTSSSAATPDNASHFYFSTPSPHPNESW
+ P+ NS+ P CQ+C K GHTAL CY+R + Y PP QA +TP+ P+ +W
Subjt: ------------------PKWPNNNSTSPHCQICGKLGHTALVCYNRHNPLYHASNPPTPQAFFTQVQSSTNSTSSSAATPDNASHFYFSTPSPHPNESW
Query: FMDSRETHHVTPDATNLQ-QSSVYYG-NELVVIDNRKIFFPRQSFFGVILMGVSKSSPTFHIGLLVSRVSLLFFYQPFKMFSCGIPVRPSDISNCSKSAK
+ DS THH+T D NL ++ Y+G +++ +D+ K +L G SK PF + P+ + S
Subjt: FMDSRETHHVTPDATNLQ-QSSVYYG-NELVVIDNRKIFFPRQSFFGVILMGVSKSSPTFHIGLLVSRVSLLFFYQPFKMFSCGIPVRPSDISNCSKSAK
Query: NFSSHKGNLCLDLSSGKSFVSRHVVFNESVFPFQSNSVKAPMSVYQTFPNYFFPPDSLMSLSSFTPSPLNINPVSPTSLSITS----------SPTITEL
+ S G C + +G++++SR V+F E+ FPFQ + P V Q+ P+ PP L+ L S P +PV P + S S +P++ L
Subjt: NFSSHKGNLCLDLSSGKSFVSRHVVFNESVFPFQSNSVKAPMSVYQTFPNYFFPPDSLMSLSSFTPSPLNINPVSPTSLSITS----------SPTITEL
Query: NDQNQASSPSPDP------PTPTFSSDQSFPSHHTSPASLPSSMPPSP-------------ILSSPSQ----SYRVCHPLHLLAQLH-------------
N +S P DP PT T + SF + +P + ++ PP P +S P + R P LLA+ H
Subjt: NDQNQASSPSPDP------PTPTFSSDQSFPSHHTSPASLPSSMPPSP-------------ILSSPSQ----SYRVCHPLHLLAQLH-------------
Query: ---------------------------------------------------LFQFSSSYLAQGYTQAYGIDYFETFSPVVKSATIRIVLSLAVTNNWTVR
+ +F + +A+G+ Q GIDY ET+SPV+K T+R +LS+A++ W++R
Subjt: ---------------------------------------------------LFQFSSSYLAQGYTQAYGIDYFETFSPVVKSATIRIVLSLAVTNNWTVR
Query: QLDVHNAFLHGDLKEEVFMRQPASFEDPFFPNHVLLLHVIVW
Q+D+ NAFLHG L E+VFM QP ++ P +P+HV L+ ++
Subjt: QLDVHNAFLHGDLKEEVFMRQPASFEDPFFPNHVLLLHVIVW
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| A0A6J1DQX7 uncharacterized protein LOC111022315 | 1.2e-61 | 43.33 | Show/hide |
Query: PIQFLDVAQTQVNPNYLVWQKYNRILMSWMYSSLNEDKTGEIIGCGFAFEIWEHLRVVYESSSTARLMALRSQLQKVRKDSLTMSKYLAKIKDITYQFAA
P QFLD Q Q NP Y W++YNR+LM W+YSSL+E+K GE++ +IW L VY+S +TAR+M L+++LQ +RKD ++S+YLAKIK+I +FAA
Subjt: PIQFLDVAQTQVNPNYLVWQKYNRILMSWMYSSLNEDKTGEIIGCGFAFEIWEHLRVVYESSSTARLMALRSQLQKVRKDSLTMSKYLAKIKDITYQFAA
Query: IGEPLSYRDHLVYILEGLRSEYNPFVTSIQNRTDRPFLADVRSLLLAY------------------------VDHKLCAPP-------------------
+GEPLSYRDHL ++L+GL SEYN FVTSI NR D P L DVRSLLLAY + H PP
Subjt: IGEPLSYRDHLVYILEGLRSEYNPFVTSIQNRTDRPFLADVRSLLLAY------------------------VDHKLCAPP-------------------
Query: ---------------KWPNNNSTSP-HCQICGKLGHTALVCYNRHNPLYHASNPPTPQAFFTQVQSSTNSTSSSAATPDNASHFYFSTPSPHPNESWFMD
KWP S+S CQICGKLGH+A VCY+R N YH + +PQA + VQ S SS H + HP+ESWFMD
Subjt: ---------------KWPNNNSTSP-HCQICGKLGHTALVCYNRHNPLYHASNPPTPQAFFTQVQSSTNSTSSSAATPDNASHFYFSTPSPHPNESWFMD
Query: SRETHHVTPDATNLQQSSVYYGNELVVIDN
S THH+TPD++ L + Y G E V + N
Subjt: SRETHHVTPDATNLQQSSVYYGNELVVIDN
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| A5AQ04 Integrase catalytic domain-containing protein | 3.5e-48 | 24.8 | Show/hide |
Query: VAQTQVNPNYLVWQKYNRILMSWMYSSLNEDKTGEIIGCGFAFEIWEHLRVVYESSSTARLMALRSQLQKVRKDSLTMSKYLAKIKDITYQFAAIGEPLS
++ +VNP++LVW++Y+R+++SW+YSSL + G+I+G + E W L+ + +S+ AR M LR Q +K SLTM +Y+ K+K I+ AAIGEP+
Subjt: VAQTQVNPNYLVWQKYNRILMSWMYSSLNEDKTGEIIGCGFAFEIWEHLRVVYESSSTARLMALRSQLQKVRKDSLTMSKYLAKIKDITYQFAAIGEPLS
Query: YRDHLVYILEGLRSEYNPFVTSIQNRTDRPFLADVRSLLLAY-----------VDHKLCA----------------------------------------
+D ++ +L GL +EYNP V S+ R D L V S+LL + + L A
Subjt: YRDHLVYILEGLRSEYNPFVTSIQNRTDRPFLADVRSLLLAY-----------VDHKLCA----------------------------------------
Query: ------PPKWPNNNSTS---PHCQICGKLGHTALVCYNRHNPLYHASNPPTPQAFFTQVQSSTNSTSSSAATPDNASHFYFSTPSPHPNESWFMDSRETH
P ++ NN S + P CQ+CGK GH L CY+R + Y P +STS TP + + PS +SWF+DS TH
Subjt: ------PPKWPNNNSTS---PHCQICGKLGHTALVCYNRHNPLYHASNPPTPQAFFTQVQSSTNSTSSSAATPDNASHFYFSTPSPHPNESWFMDSRETH
Query: HVTPDATNLQQSSVYYGNELVVI---------DNRKIF-FPRQSFF------------------------------------------------------
H++ A N+ + Y G + V++ DN I F SFF
Subjt: HVTPDATNLQQSSVYYGNELVVI---------DNRKIF-FPRQSFF------------------------------------------------------
Query: ----GVILMGV------------------------------------------------------------SKSSPTFHIGLLVSRVSLLFFYQPFKMFS
GVIL + K T H G ++ L + FS
Subjt: ----GVILMGV------------------------------------------------------------SKSSPTFHIGLLVSRVSLLFFYQPFKMFS
Query: CG--------------------------------------------IPVRPSDISN------------------------CSKSAKNFS-----------
C I PS + N C K+ +
Subjt: CG--------------------------------------------IPVRPSDISN------------------------CSKSAKNFS-----------
Query: -------SHKGNLCLDLSSGKSFVSRHVVFNESVFPFQSNSVKAPMSVY-QTFPNYFFPPDSLM---SLSSFTPSPLNINPVSPTSLSITSSPTI-----
SHKG LCL+ ++ + ++SRHVVF E+ FPFQ+ S + S + P + PP ++ + SS +P P SP + S++ P I
Subjt: -------SHKGNLCLDLSSGKSFVSRHVVFNESVFPFQSNSVKAPMSVY-QTFPNYFFPPDSLM---SLSSFTPSPLNINPVSPTSLSITSSPTI-----
Query: ---TELNDQNQASSPSPDPPTPTFSSDQS--------FPSHHTSPASLPSSMPPSPILSSPSQSYRV--------------------CHPLHLLAQL---
E + S +P P P + +S S P ++ ++ + Q Y+ C + L
Subjt: ---TELNDQNQASSPSPDPPTPTFSSDQS--------FPSHHTSPASLPSSMPPSPILSSPSQSYRV--------------------CHPLHLLAQL---
Query: HLFQFSSSYLAQGYTQAYGIDYFETFSPVVKSATIRIVLSLAVTNNWTVRQLDVHNAFLHGDLKEEVFMRQPASFEDPFFPNHVLLL
+ ++ + +AQG+ Q YGID+FETFSPVVK TIR+VLS+AV++NW ++QLDVHNAFL+GDL+E+VFM QP FED P HV L
Subjt: HLFQFSSSYLAQGYTQAYGIDYFETFSPVVKSATIRIVLSLAVTNNWTVRQLDVHNAFLHGDLKEEVFMRQPASFEDPFFPNHVLLL
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| A5B1N8 Integrase catalytic domain-containing protein | 3.4e-59 | 28.51 | Show/hide |
Query: QVNPNYLVWQKYNRILMSWMYSSLNEDKTGEIIGCGFAFEIWEHLRVVYESSSTARLMALRSQLQKVRKDSLTMSKYLAKIKDITYQFAAIGEPLSYRDH
+ NP++++W++++R+++SW+YSSL + G+I+G + W L ++ +SS AR+M LR + Q RK SLTM +Y+ K+K + AAIGEP++ RD
Subjt: QVNPNYLVWQKYNRILMSWMYSSLNEDKTGEIIGCGFAFEIWEHLRVVYESSSTARLMALRSQLQKVRKDSLTMSKYLAKIKDITYQFAAIGEPLSYRDH
Query: LVYILEGLRSEYNPFVTSIQNRTDRPFLADVRSLLL--------AYVDHKLCAPPKWPNNNSTS--------------------------PHCQICGKLG
++ +L GL ++YN V S+ PF + ++ L + L P NN S P CQ+CGK G
Subjt: LVYILEGLRSEYNPFVTSIQNRTDRPFLADVRSLLL--------AYVDHKLCAPPKWPNNNSTS--------------------------PHCQICGKLG
Query: HTALVCYNRHNPLYHASNPPTPQAFFTQVQSSTNSTSSSAATPDNASHFYFSTPSPHPNESWFMDSRETHHVTPDATNLQQSSVYYGNELVVIDNRKI--
HT + CY+R + + NP + ++ ++ N ++PS +E+WF D+ THH++ L Y GN+ V++ N
Subjt: HTALVCYNRHNPLYHASNPPTPQAFFTQVQSSTNSTSSSAATPDNASHFYFSTPSPHPNESWFMDSRETHHVTPDATNLQQSSVYYGNELVVIDNRKI--
Query: -------------FFPRQS-----------FFGVILMGVSK----------SSPTFHIGLLVSRV-------SLLFFYQP----FKMFSCGI--PVRPSD
+ P Q+ G+ L+ + + F I L ++V +LF P FK+F C +RP +
Subjt: -------------FFPRQS-----------FFGVILMGVSK----------SSPTFHIGLLVSRV-------SLLFFYQP----FKMFSCGI--PVRPSD
Query: ISNCSKSAKN------FSSHKGNLCLDLSSGKSFVSRHVVFNESVFPFQSNSVKAPMSVYQTFPNYFFPPDS---LMSLSSFTPSPLNINPVSPTSLSIT
+ S + S+HKG +CL+ +G+ +V+RHVVF+E+VFPFQS ++ V T P F P S + SL S T + P++ S
Subjt: ISNCSKSAKN------FSSHKGNLCLDLSSGKSFVSRHVVFNESVFPFQSNSVKAPMSVYQTFPNYFFPPDS---LMSLSSFTPSPLNINPVSPTSLSIT
Query: SSPTITELNDQN-QASSPSPDPPTPTFSSDQS--------FPSHHTSPASLPSSMPPS-------------------PILSSPSQSYRV----CHPLHLL
S P + ++ + S P P P + ++ F SH + P + ++ S ++ PS + + L
Subjt: SSPTITELNDQN-QASSPSPDPPTPTFSSDQS--------FPSHHTSPASLPSSMPPS-------------------PILSSPSQSYRV----CHPLHLL
Query: AQLHLFQFSSSYLAQGYTQAYGIDYFETFSPVVKSATIRIVLSLAVTNNWTVRQLDVHNAFLHGDLKEEVFMRQPASFEDPFFPNHVLLLH
+ ++ + +AQG+TQ G++YFETFSPVVK++TIRI+L++A++ NW+V QLDV NAFLHGDL+E VFM+QP F + +P+HV L+
Subjt: AQLHLFQFSSSYLAQGYTQAYGIDYFETFSPVVKSATIRIVLSLAVTNNWTVRQLDVHNAFLHGDLKEEVFMRQPASFEDPFFPNHVLLLH
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| A5CAE5 Reverse transcriptase Ty1/copia-type domain-containing protein | 4.7e-53 | 29.09 | Show/hide |
Query: VAQTQVNPNYLVWQKYNRILMSWMYSSLNEDKTGEIIGCGFAFEIWEHLRVVYESSSTARLMALRSQLQKVRKDSLTMSKYLAKIKDITYQFAAIGEPLS
++ +VNP++LV ++Y+R+++SW+YSSL D +I+G + E W L+ + +S+ AR M LR Q +K SLTM +Y+ K+K I+ AAIGEP+
Subjt: VAQTQVNPNYLVWQKYNRILMSWMYSSLNEDKTGEIIGCGFAFEIWEHLRVVYESSSTARLMALRSQLQKVRKDSLTMSKYLAKIKDITYQFAAIGEPLS
Query: YRDHLVYILEGLRSEYNPFVTSIQNRTDRPFLADVRSLLLAYVDHKLCAPPKWPNNNSTSPHCQICGKLGHTALVCYNRHN-PLYHASNPPT----PQAF
+D ++ +L GL +EYNP V S+ R D L V S+LL + + +L H Q + + HN P SN P+ PQ+F
Subjt: YRDHLVYILEGLRSEYNPFVTSIQNRTDRPFLADVRSLLLAYVDHKLCAPPKWPNNNSTSPHCQICGKLGHTALVCYNRHN-PLYHASNPPT----PQAF
Query: FTQVQSST------------------NSTSSSAATPD-----NASHFYFSTPSPHPNESWFMDSRETHHVTPDATNLQQSSVYYGNELVVIDN-------
++ T N+ S + P H FS H + + R THH++ A N+ + Y G + V++ N
Subjt: FTQVQSST------------------NSTSSSAATPD-----NASHFYFSTPSPHPNESWFMDSRETHHVTPDATNLQQSSVYYGNELVVIDN-------
Query: --------RKI----------------FFPRQSFFGVILMGVSKSSPTFHIGLLVSRVSLLFFYQP----FKMFSCGIPVRPSDISNCSKSAKN------
R + F+P +F + + SP + S SLL+ + P FK+F C +++ ++
Subjt: --------RKI----------------FFPRQSFFGVILMGVSKSSPTFHIGLLVSRVSLLFFYQP----FKMFSCGIPVRPSDISNCSKSAKN------
Query: --FSSHKGNLCLDLSSGKSFVSRHVVFNESVFPFQSNSVKAPMSVY-QTFPNYFFPPDSLM---SLSSFTPSPLNINPVSPTSLSITSSPTI--------
SHKG LCL+ ++ + ++SRHVVF E+ FPFQ+ S + S + P + PP ++ + SS +P P SP + S++ P I
Subjt: --FSSHKGNLCLDLSSGKSFVSRHVVFNESVFPFQSNSVKAPMSVY-QTFPNYFFPPDSLM---SLSSFTPSPLNINPVSPTSLSITSSPTI--------
Query: TELNDQNQASSPSPDPPTPTFSSDQS--------FPSHHTSPASLPSSMPPSPILSSPSQSYRV--------------------CHPLHLLAQL---HLF
E + S +P P P + +S S P ++ ++ + Q Y+ C + L +
Subjt: TELNDQNQASSPSPDPPTPTFSSDQS--------FPSHHTSPASLPSSMPPSPILSSPSQSYRV--------------------CHPLHLLAQL---HLF
Query: QFSSSYLAQGYTQAYGIDYFETFSPVVKSATIRIVLSLAVTNNWTVRQLDVHNAFLHGDLKEEVFMRQPASFEDPFFPNHVLLL
++ + +AQG+ Q YGID+FETFSPVVK TIR+VLS+AV++NW ++QLDVHNAFL+GDL+E+VFM QP FED P HV L
Subjt: QFSSSYLAQGYTQAYGIDYFETFSPVVKSATIRIVLSLAVTNNWTVRQLDVHNAFLHGDLKEEVFMRQPASFEDPFFPNHVLLL
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| SwissProt top hits | e value | %identity | Alignment |
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| P04146 Copia protein | 1.1e-11 | 47.83 | Show/hide |
Query: QFSSSYLAQGYTQAYGIDYFETFSPVVKSATIRIVLSLAVTNNWTVRQLDVHNAFLHGDLKEEVFMRQP
++ + +A+G+TQ Y IDY ETF+PV + ++ R +LSL + N V Q+DV AFL+G LKEE++MR P
Subjt: QFSSSYLAQGYTQAYGIDYFETFSPVVKSATIRIVLSLAVTNNWTVRQLDVHNAFLHGDLKEEVFMRQP
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.6e-13 | 50.67 | Show/hide |
Query: LFQFSSSYLAQGYTQAYGIDYFETFSPVVKSATIRIVLSLAVTNNWTVRQLDVHNAFLHGDLKEEVFMRQPASFE
L ++ + + +G+ Q GID+ E FSPVVK +IR +LSLA + + V QLDV AFLHGDL+EE++M QP FE
Subjt: LFQFSSSYLAQGYTQAYGIDYFETFSPVVKSATIRIVLSLAVTNNWTVRQLDVHNAFLHGDLKEEVFMRQPASFE
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 6.6e-20 | 24.37 | Show/hide |
Query: AQTQVNPNYLVWQKYNRILMSWMYSSLNEDKTGEIIGCGFAFEIWEHLRVVYESSSTARLMALRSQLQKVRKDSLTMSKYLAKIKDITYQFAAIGEPLSY
A +VNP+Y W++ ++++ S + +++ + A +IWE LR +Y + S + LR+QL++ K + T+ Y+ + Q A +G+P+ +
Subjt: AQTQVNPNYLVWQKYNRILMSWMYSSLNEDKTGEIIGCGFAFEIWEHLRVVYESSSTARLMALRSQLQKVRKDSLTMSKYLAKIKDITYQFAAIGEPLSY
Query: RDHLVYILEGLRSEYNPFVTSIQNRTDRPFLADVRSLLLAY-------------------VDHKLCAPPK----------------------W-------
+ + +LE L EY P + I + P L ++ LL + V H+ W
Subjt: RDHLVYILEGLRSEYNPFVTSIQNRTDRPFLADVRSLLLAY-------------------VDHKLCAPPK----------------------W-------
Query: -PNNNSTSPH---CQICGKLGHTALVCYNRHNPL--YHASNPPTPQAFFTQVQSSTNSTSSSAATPDNASHFYFSTPSPHPNESWFMDSRETHHVTPDAT
PNNN + P+ CQICG GH+A C + L ++ PP+P FT Q N + SP+ + +W +DS THH+T D
Subjt: -PNNNSTSPH---CQICGKLGHTALVCYNRHNPL--YHASNPPTPQAFFTQVQSSTNSTSSSAATPDNASHFYFSTPSPHPNESWFMDSRETHHVTPDAT
Query: NLQQSSVYYGNELVVI
NL Y G + V++
Subjt: NLQQSSVYYGNELVVI
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 1.1e-17 | 52.33 | Show/hide |
Query: LFQFSSSYLAQGYTQAYGIDYFETFSPVVKSATIRIVLSLAVTNNWTVRQLDVHNAFLHGDLKEEVFMRQPASFEDPFFPNHVLLL
L ++ + +A+GY Q G+DY ETFSPV+KS +IRIVL +AV +W +RQLDV+NAFL G L ++V+M QP F D PN+V L
Subjt: LFQFSSSYLAQGYTQAYGIDYFETFSPVVKSATIRIVLSLAVTNNWTVRQLDVHNAFLHGDLKEEVFMRQPASFEDPFFPNHVLLL
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 8.1e-18 | 49.45 | Show/hide |
Query: LFQFSSSYLAQGYTQAYGIDYFETFSPVVKSATIRIVLSLAVTNNWTVRQLDVHNAFLHGDLKEEVFMRQPASFEDPFFPNHVLLLHVIVW
L ++ + +A+GY Q G+DY ETFSPV+KS +IRIVL +AV +W +RQLDV+NAFL G L +EV+M QP F D P++V L ++
Subjt: LFQFSSSYLAQGYTQAYGIDYFETFSPVVKSATIRIVLSLAVTNNWTVRQLDVHNAFLHGDLKEEVFMRQPASFEDPFFPNHVLLLHVIVW
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