; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0008232 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0008232
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUDP-N-acetylmuramoyl-L-alanyl-D-glutamate-2, 6-diaminopimelate ligase
Genome locationchr9:15350505..15354735
RNA-Seq ExpressionLag0008232
SyntenyLag0008232
Gene Ontology termsGO:0016874 - ligase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605258.1 hypothetical protein SDJN03_02575, partial [Cucurbita argyrosperma subsp. sororia]7.9e-7589.33Show/hide
Query:  MSDREDTDSDAPEEFTAEQGIQQDQEIRKVQKESKARVVREGKERRRLWAEKKTPRPSKKGEIVEDVAETPAHNDQISKLGMLPSNLVQLLADREKQVFS
        MSD  DTDSDAPEEFTAEQGIQQD+EIRKVQKES ARVVREGKERRR WAEKKTPR SKKGE VEDVAETP HNDQ+SKLGMLPSNLVQLLA+REKQVFS
Subjt:  MSDREDTDSDAPEEFTAEQGIQQDQEIRKVQKESKARVVREGKERRRLWAEKKTPRPSKKGEIVEDVAETPAHNDQISKLGMLPSNLVQLLADREKQVFS

Query:  SDHGDEKPVVKPKTKRKKTKSSGIETVLLNERTPSQCLQNSLEFLKKRKMNISRSSSVLDNPNQALRLLSSSGLLTKK
        SD GDEKP  K KTKRKK+KSSGI+TVLLNER PSQCLQNSLEFLKKRKMNI RSSSVLDN NQALRLLSSSGLLTKK
Subjt:  SDHGDEKPVVKPKTKRKKTKSSGIETVLLNERTPSQCLQNSLEFLKKRKMNISRSSSVLDNPNQALRLLSSSGLLTKK

KAG7035221.1 hypothetical protein SDJN02_02016, partial [Cucurbita argyrosperma subsp. argyrosperma]2.7e-7589.89Show/hide
Query:  MSDREDTDSDAPEEFTAEQGIQQDQEIRKVQKESKARVVREGKERRRLWAEKKTPRPSKKGEIVEDVAETPAHNDQISKLGMLPSNLVQLLADREKQVFS
        MSD  DTDSDAPEEFTAEQGIQQD+EIRKVQKES ARVVREGKERRR WAEKKTPR SKKGE VEDVAETP HNDQ+SKLGMLPSNLVQLLA+REKQVFS
Subjt:  MSDREDTDSDAPEEFTAEQGIQQDQEIRKVQKESKARVVREGKERRRLWAEKKTPRPSKKGEIVEDVAETPAHNDQISKLGMLPSNLVQLLADREKQVFS

Query:  SDHGDEKPVVKPKTKRKKTKSSGIETVLLNERTPSQCLQNSLEFLKKRKMNISRSSSVLDNPNQALRLLSSSGLLTKK
        SD GDEKP  K KTKRKK+KSSGIETVLLNER PSQCLQNSLEFLKKRKMNI RSSSVLDN NQALRLLSSSGLLTKK
Subjt:  SDHGDEKPVVKPKTKRKKTKSSGIETVLLNERTPSQCLQNSLEFLKKRKMNISRSSSVLDNPNQALRLLSSSGLLTKK

XP_004148046.1 uncharacterized protein LOC101208336 [Cucumis sativus]1.2e-7587.08Show/hide
Query:  MSDREDTDSDAPEEFTAEQGIQQDQEIRKVQKESKARVVREGKERRRLWAEKKTPRPSKKGEIVEDVAETPAHNDQISKLGMLPSNLVQLLADREKQVFS
        MSDRE+TDSDAPEEFTAEQG+QQD+EIRKVQKESKARV+REGKERRRLWAEKKTPRPSKKGEIVED+AE P ++D+ISKLG LPSN+VQLL DREKQVFS
Subjt:  MSDREDTDSDAPEEFTAEQGIQQDQEIRKVQKESKARVVREGKERRRLWAEKKTPRPSKKGEIVEDVAETPAHNDQISKLGMLPSNLVQLLADREKQVFS

Query:  SDHGDEKPVVKPKTKRKKTKSSGIETVLLNERTPSQCLQNSLEFLKKRKMNISRSSSVLDNPNQALRLLSSSGLLTKK
        SD GDEKP +KPK KRKKTKSSGIETVLLNERTPS CLQNSLEFLKKRKMN++RSS+VL NPNQA RLLSSSGLLTKK
Subjt:  SDHGDEKPVVKPKTKRKKTKSSGIETVLLNERTPSQCLQNSLEFLKKRKMNISRSSSVLDNPNQALRLLSSSGLLTKK

XP_022158697.1 uncharacterized protein LOC111025162 [Momordica charantia]6.1e-7589.83Show/hide
Query:  MSDREDTDSDAPEEFTAEQGIQQDQEIRKVQKESKARVVREGKERRRLWAEKKTPRPSKKGEIVEDVAETPAHNDQISKLGMLPSNLVQLLADREKQVFS
        MSD EDTDSDAPEEFTAEQGIQQDQEI KVQ ESKARVVREGKERRRLWAEKKTPRPSKKGE VEDVAE P+H DQ SKLGMLPSNLVQLLADREKQVFS
Subjt:  MSDREDTDSDAPEEFTAEQGIQQDQEIRKVQKESKARVVREGKERRRLWAEKKTPRPSKKGEIVEDVAETPAHNDQISKLGMLPSNLVQLLADREKQVFS

Query:  SDHGDEKPVVKPKTKRKKTKSSGIETVLLNERTPSQCLQNSLEFLKKRKMNISRSSSVLDNPNQALRLLSSSGLLTK
        SD GDEKP  KPKTKRKKTKSSGIETV+LN+R P+QCLQNS+EFLKKRKMNI RSSSVLDNPNQALR LSSSGLLTK
Subjt:  SDHGDEKPVVKPKTKRKKTKSSGIETVLLNERTPSQCLQNSLEFLKKRKMNISRSSSVLDNPNQALRLLSSSGLLTK

XP_038901892.1 uncharacterized protein LOC120088571 [Benincasa hispida]1.2e-7588.83Show/hide
Query:  MSDREDTDSDAPEEFTAEQGIQQDQEIRKVQKESKARVVREGKERRRLWAEKKTPRPSKKGEIVEDVAETPA-HNDQISKLGMLPSNLVQLLADREKQVF
        MSDREDTDSDAPEEFTAEQG+QQD+EIRKVQKESKARVVREGKERRRLWAEKKTPRPSKKGE VED+AE P  H+DQISKLGMLPSN+VQLL DREKQVF
Subjt:  MSDREDTDSDAPEEFTAEQGIQQDQEIRKVQKESKARVVREGKERRRLWAEKKTPRPSKKGEIVEDVAETPA-HNDQISKLGMLPSNLVQLLADREKQVF

Query:  SSDHGDEKPVVKPKTKRKKTKSSGIETVLLNERTPSQCLQNSLEFLKKRKMNISRSSSVLDNPNQALRLLSSSGLLTKK
        SSD  DEKP +KPK+KRKKTKSSGIETVLL+ERTPSQCL NSLEFLKKRKMNI+RSSSVLDNPNQALRLLS+SGLL KK
Subjt:  SSDHGDEKPVVKPKTKRKKTKSSGIETVLLNERTPSQCLQNSLEFLKKRKMNISRSSSVLDNPNQALRLLSSSGLLTKK

TrEMBL top hitse value%identityAlignment
A0A0A0LM07 Uncharacterized protein5.9e-7687.08Show/hide
Query:  MSDREDTDSDAPEEFTAEQGIQQDQEIRKVQKESKARVVREGKERRRLWAEKKTPRPSKKGEIVEDVAETPAHNDQISKLGMLPSNLVQLLADREKQVFS
        MSDRE+TDSDAPEEFTAEQG+QQD+EIRKVQKESKARV+REGKERRRLWAEKKTPRPSKKGEIVED+AE P ++D+ISKLG LPSN+VQLL DREKQVFS
Subjt:  MSDREDTDSDAPEEFTAEQGIQQDQEIRKVQKESKARVVREGKERRRLWAEKKTPRPSKKGEIVEDVAETPAHNDQISKLGMLPSNLVQLLADREKQVFS

Query:  SDHGDEKPVVKPKTKRKKTKSSGIETVLLNERTPSQCLQNSLEFLKKRKMNISRSSSVLDNPNQALRLLSSSGLLTKK
        SD GDEKP +KPK KRKKTKSSGIETVLLNERTPS CLQNSLEFLKKRKMN++RSS+VL NPNQA RLLSSSGLLTKK
Subjt:  SDHGDEKPVVKPKTKRKKTKSSGIETVLLNERTPSQCLQNSLEFLKKRKMNISRSSSVLDNPNQALRLLSSSGLLTKK

A0A5A7TWK6 Uncharacterized protein4.7e-7384.92Show/hide
Query:  MSDREDTDSDAPEEFTAEQGIQQDQEIRKVQKESKARVVREGKERRRLWAEKKTPRPSKKGEIVEDVAETPAHNDQISKLGMLPSNLVQLLADREKQVFS
        MSDRE+TDSDAPEEFTAEQG+QQD+EIRKVQ ESKARV+REGKERRRLWAEKKTPRPSKKGEIVED+AE P ++D++SKLG LPSN+VQLL DREKQVFS
Subjt:  MSDREDTDSDAPEEFTAEQGIQQDQEIRKVQKESKARVVREGKERRRLWAEKKTPRPSKKGEIVEDVAETPAHNDQISKLGMLPSNLVQLLADREKQVFS

Query:  SDHGDEKPVVKPKTKRKKTK-SSGIETVLLNERTPSQCLQNSLEFLKKRKMNISRSSSVLDNPNQALRLLSSSGLLTKK
        SD GDEKP +KPK KRKKTK SSGIETVLL+ERTPS CLQNSLEFLKKRKMN++RSS+VL+NPNQA RLLSSSGLLTKK
Subjt:  SDHGDEKPVVKPKTKRKKTK-SSGIETVLLNERTPSQCLQNSLEFLKKRKMNISRSSSVLDNPNQALRLLSSSGLLTKK

A0A6J1DXW1 uncharacterized protein LOC1110251622.9e-7589.83Show/hide
Query:  MSDREDTDSDAPEEFTAEQGIQQDQEIRKVQKESKARVVREGKERRRLWAEKKTPRPSKKGEIVEDVAETPAHNDQISKLGMLPSNLVQLLADREKQVFS
        MSD EDTDSDAPEEFTAEQGIQQDQEI KVQ ESKARVVREGKERRRLWAEKKTPRPSKKGE VEDVAE P+H DQ SKLGMLPSNLVQLLADREKQVFS
Subjt:  MSDREDTDSDAPEEFTAEQGIQQDQEIRKVQKESKARVVREGKERRRLWAEKKTPRPSKKGEIVEDVAETPAHNDQISKLGMLPSNLVQLLADREKQVFS

Query:  SDHGDEKPVVKPKTKRKKTKSSGIETVLLNERTPSQCLQNSLEFLKKRKMNISRSSSVLDNPNQALRLLSSSGLLTK
        SD GDEKP  KPKTKRKKTKSSGIETV+LN+R P+QCLQNS+EFLKKRKMNI RSSSVLDNPNQALR LSSSGLLTK
Subjt:  SDHGDEKPVVKPKTKRKKTKSSGIETVLLNERTPSQCLQNSLEFLKKRKMNISRSSSVLDNPNQALRLLSSSGLLTK

A0A6J1G7P4 uncharacterized protein LOC1114514988.5e-7589.33Show/hide
Query:  MSDREDTDSDAPEEFTAEQGIQQDQEIRKVQKESKARVVREGKERRRLWAEKKTPRPSKKGEIVEDVAETPAHNDQISKLGMLPSNLVQLLADREKQVFS
        MSD  DTDSDAPEEFTAEQGIQQD+EIRKVQKES ARVVREGKERRR WAEKKTPR SKK E VEDVAETP HNDQ+SKLGMLPSNLVQLLA+REKQVFS
Subjt:  MSDREDTDSDAPEEFTAEQGIQQDQEIRKVQKESKARVVREGKERRRLWAEKKTPRPSKKGEIVEDVAETPAHNDQISKLGMLPSNLVQLLADREKQVFS

Query:  SDHGDEKPVVKPKTKRKKTKSSGIETVLLNERTPSQCLQNSLEFLKKRKMNISRSSSVLDNPNQALRLLSSSGLLTKK
        SD GDEKP  K KTKRKK+KSSGIETVLLNER PSQCLQNSLEFLKKRKMNI RSSSVLDN NQALRLLSSSGLLTKK
Subjt:  SDHGDEKPVVKPKTKRKKTKSSGIETVLLNERTPSQCLQNSLEFLKKRKMNISRSSSVLDNPNQALRLLSSSGLLTKK

A0A6J1KZ49 uncharacterized protein LOC1114995705.5e-7487.64Show/hide
Query:  MSDREDTDSDAPEEFTAEQGIQQDQEIRKVQKESKARVVREGKERRRLWAEKKTPRPSKKGEIVEDVAETPAHNDQISKLGMLPSNLVQLLADREKQVFS
        MSD  DTDSDAPEEFTAEQGIQQD+EIRK+QKES ARVVREGKERRR WAEKKTPRPSKKGE VEDVAETP HNDQ+SKLGMLPSNLVQLLA+REKQVFS
Subjt:  MSDREDTDSDAPEEFTAEQGIQQDQEIRKVQKESKARVVREGKERRRLWAEKKTPRPSKKGEIVEDVAETPAHNDQISKLGMLPSNLVQLLADREKQVFS

Query:  SDHGDEKPVVKPKTKRKKTKSSGIETVLLNERTPSQCLQNSLEFLKKRKMNISRSSSVLDNPNQALRLLSSSGLLTKK
        SD GDEKP  K KT+R+K+KSSGIETVLLN R PSQC QNSLEFLKKRKMNI RSSSVLDN NQALRLLSSSGLLTKK
Subjt:  SDHGDEKPVVKPKTKRKKTKSSGIETVLLNERTPSQCLQNSLEFLKKRKMNISRSSSVLDNPNQALRLLSSSGLLTKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G37090.1 unknown protein2.2e-3045.9Show/hide
Query:  MSDRE--DTDSDAPEEFTAEQGIQQDQEIRKVQKESKARVVREGKERRRLWAEKKTPRPSKKGEIVEDVA--ETPAHNDQ-ISKLGMLPSNLVQLLADRE
        MSD +  D+DSDAPEE T EQ   +++ + K+Q+E+K RV RE KERR+L AE+ T R S+K EI+EDV   E P  N + ++  G L  +++  LA+RE
Subjt:  MSDRE--DTDSDAPEEFTAEQGIQQDQEIRKVQKESKARVVREGKERRRLWAEKKTPRPSKKGEIVEDVA--ETPAHNDQ-ISKLGMLPSNLVQLLADRE

Query:  KQVFSSDHGDEKPVVKPKTKRKKTKSSGIETVLLNERTPSQCLQNSLEFLKKRKMNISRSSSVLDNPNQALRLLSSSGLLTKK
        KQ   SD  +E+ ++    ++KK KSSGIETV+  E  P +CL+  L+FLK R+  + RSSSV+ N  QALRL + + L  K+
Subjt:  KQVFSSDHGDEKPVVKPKTKRKKTKSSGIETVLLNERTPSQCLQNSLEFLKKRKMNISRSSSVLDNPNQALRLLSSSGLLTKK

AT4G37090.2 unknown protein4.1e-2945.9Show/hide
Query:  MSDRE--DTDSDAPEEFTAEQGIQQDQEIRKVQKESKARVVREGKERRRLWAEKKTPRPSKKGEIVEDVA--ETPAHNDQ-ISKLGMLPSNLVQLLADRE
        MSD +  D+DSDAPEE T EQ   +++ + K+Q+E+K RV RE KERR+L AE+ T R S+K EI+EDV   E P  N + ++  G L  +++  LA+RE
Subjt:  MSDRE--DTDSDAPEEFTAEQGIQQDQEIRKVQKESKARVVREGKERRRLWAEKKTPRPSKKGEIVEDVA--ETPAHNDQ-ISKLGMLPSNLVQLLADRE

Query:  KQVFSSDHGDEKPVVKPKTKRKKTKSSGIETVLLNERTPSQCLQNSLEFLKKRKMNISRSSSVLDNPNQALRLLSSSGLLTKK
        KQ   SD  +E+ ++    ++KK KSSGIETV+  E  P +CL+  L+FLK R+  + RSSSV+ N  QALRL + + L  K+
Subjt:  KQVFSSDHGDEKPVVKPKTKRKKTKSSGIETVLLNERTPSQCLQNSLEFLKKRKMNISRSSSVLDNPNQALRLLSSSGLLTKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGACAGAGAAGATACCGATTCCGACGCCCCCGAGGAGTTCACTGCCGAGCAGGGAATACAGCAAGATCAAGAGATTAGAAAAGTTCAAAAAGAAAGTAAGGCCAG
GGTTGTTCGTGAAGGAAAAGAACGTCGTAGACTGTGGGCTGAAAAGAAAACACCACGCCCATCTAAAAAGGGTGAAATTGTCGAAGATGTAGCAGAAACCCCTGCACATA
ATGATCAAATTAGCAAGTTGGGAATGCTTCCCAGTAATCTGGTCCAACTGCTTGCAGATCGTGAGAAACAAGTTTTCTCGTCAGACCATGGAGATGAAAAGCCTGTTGTA
AAGCCAAAAACAAAGAGGAAGAAAACCAAAAGCTCTGGGATTGAGACGGTTCTTTTAAACGAAAGAACACCATCTCAATGCTTACAGAACTCCTTGGAATTTTTGAAGAA
AAGGAAGATGAATATTTCAAGGTCATCATCAGTTCTCGACAATCCTAACCAAGCGTTACGCCTTCTTTCTTCATCTGGCTTGTTAACTAAGAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGTCGGACAGAGAAGATACCGATTCCGACGCCCCCGAGGAGTTCACTGCCGAGCAGGGAATACAGCAAGATCAAGAGATTAGAAAAGTTCAAAAAGAAAGTAAGGCCAG
GGTTGTTCGTGAAGGAAAAGAACGTCGTAGACTGTGGGCTGAAAAGAAAACACCACGCCCATCTAAAAAGGGTGAAATTGTCGAAGATGTAGCAGAAACCCCTGCACATA
ATGATCAAATTAGCAAGTTGGGAATGCTTCCCAGTAATCTGGTCCAACTGCTTGCAGATCGTGAGAAACAAGTTTTCTCGTCAGACCATGGAGATGAAAAGCCTGTTGTA
AAGCCAAAAACAAAGAGGAAGAAAACCAAAAGCTCTGGGATTGAGACGGTTCTTTTAAACGAAAGAACACCATCTCAATGCTTACAGAACTCCTTGGAATTTTTGAAGAA
AAGGAAGATGAATATTTCAAGGTCATCATCAGTTCTCGACAATCCTAACCAAGCGTTACGCCTTCTTTCTTCATCTGGCTTGTTAACTAAGAAATAG
Protein sequenceShow/hide protein sequence
MSDREDTDSDAPEEFTAEQGIQQDQEIRKVQKESKARVVREGKERRRLWAEKKTPRPSKKGEIVEDVAETPAHNDQISKLGMLPSNLVQLLADREKQVFSSDHGDEKPVV
KPKTKRKKTKSSGIETVLLNERTPSQCLQNSLEFLKKRKMNISRSSSVLDNPNQALRLLSSSGLLTKK