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Lag0008243 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0008243
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNase H domain-containing protein
Genome locationchr9:15479352..15479779
RNA-Seq ExpressionLag0008243
SyntenyLag0008243
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB2617963.1 hypothetical protein D8674_013832 [Pyrus ussuriensis x Pyrus communis]7.1e-1557.14Show/hide
Query:  MCYLVQCKQCNKTSWKGCGEHLVDLYNRVEKGNHCTCRPWPGVVVPSEDAADMKTPQSSTANS
        MC+ V+CKQC KTSW GCG+HL DLY+ +E+G HC CR WPGVVVP++      T Q S A++
Subjt:  MCYLVQCKQCNKTSWKGCGEHLVDLYNRVEKGNHCTCRPWPGVVVPSEDAADMKTPQSSTANS

KAG6605256.1 hypothetical protein SDJN03_02573, partial [Cucurbita argyrosperma subsp. sororia]2.9e-2477.46Show/hide
Query:  MCYLVQCKQCNKTSWKGCGEHLVDLYNRVEKGNHCTCRPWPG-VVVPSEDAADMKTPQSSTANSK-SIPEG
        MCYLV+CK CNKTSWKGCG HL DLYNR+EKG HCTCRPWPG VVVP +D+ADMKT   S ANSK S+PEG
Subjt:  MCYLVQCKQCNKTSWKGCGEHLVDLYNRVEKGNHCTCRPWPG-VVVPSEDAADMKTPQSSTANSK-SIPEG

KAG7035219.1 hypothetical protein SDJN02_02014 [Cucurbita argyrosperma subsp. argyrosperma]8.4e-2476.06Show/hide
Query:  MCYLVQCKQCNKTSWKGCGEHLVDLYNRVEKGNHCTCRPWPG-VVVPSEDAADMKTPQSSTANSK-SIPEG
        MCYLV+CK CNKTSWKGCG HL DLYNR+EKG HCTCRPWPG VVVP +D+ADMKT   S ANSK S+P+G
Subjt:  MCYLVQCKQCNKTSWKGCGEHLVDLYNRVEKGNHCTCRPWPG-VVVPSEDAADMKTPQSSTANSK-SIPEG

KGN62035.1 hypothetical protein Csa_006238 [Cucumis sativus]2.1e-1454.93Show/hide
Query:  MCYLVQCKQCNKTSWKGCGEHLVDLYNRVEKGNHCTCRPWPGVVVPSEDAADMKTPQ-----SSTANSKSI
        MC LV CK C+K +WKGCG HL  LY  VEKG HC C PWPGVVVP ED  D   P      SS +  K++
Subjt:  MCYLVQCKQCNKTSWKGCGEHLVDLYNRVEKGNHCTCRPWPGVVVPSEDAADMKTPQ-----SSTANSKSI

RQO90457.1 hypothetical protein POPTR_005G130750 [Populus trichocarpa]2.4e-1557.14Show/hide
Query:  MCYLVQCKQCNKTSWKGCGEHLVDLYNRVEKGNHCTCRPWPGVVVPSEDAADMKTPQSSTANS
        MCY V+CKQC K SW+GCGEHL  LY  ++KG HC C+ WPGVVVP+E+ A  +TP    + S
Subjt:  MCYLVQCKQCNKTSWKGCGEHLVDLYNRVEKGNHCTCRPWPGVVVPSEDAADMKTPQSSTANS

TrEMBL top hitse value%identityAlignment
A0A0A0LJK5 Uncharacterized protein1.0e-1454.93Show/hide
Query:  MCYLVQCKQCNKTSWKGCGEHLVDLYNRVEKGNHCTCRPWPGVVVPSEDAADMKTPQ-----SSTANSKSI
        MC LV CK C+K +WKGCG HL  LY  VEKG HC C PWPGVVVP ED  D   P      SS +  K++
Subjt:  MCYLVQCKQCNKTSWKGCGEHLVDLYNRVEKGNHCTCRPWPGVVVPSEDAADMKTPQ-----SSTANSKSI

A0A2C9USL7 Uncharacterized protein1.0e-1450Show/hide
Query:  MCYLVQCKQCNKTSWKGCGEHLVDLYNRVEKGNHCTCRPWPGVVVPSED-AADMKTPQSSTANSKSIPEG
        MC+ V CKQC K SW GCG+HL  +Y+ ++KGNHC CRPWPGV +P+E+ A+  + P++  A+S +   G
Subjt:  MCYLVQCKQCNKTSWKGCGEHLVDLYNRVEKGNHCTCRPWPGVVVPSED-AADMKTPQSSTANSKSIPEG

A0A3N7EY41 Uncharacterized protein1.2e-1557.14Show/hide
Query:  MCYLVQCKQCNKTSWKGCGEHLVDLYNRVEKGNHCTCRPWPGVVVPSEDAADMKTPQSSTANS
        MCY V+CKQC K SW+GCGEHL  LY  ++KG HC C+ WPGVVVP+E+ A  +TP    + S
Subjt:  MCYLVQCKQCNKTSWKGCGEHLVDLYNRVEKGNHCTCRPWPGVVVPSEDAADMKTPQSSTANS

A0A5N5GTG4 Uncharacterized protein3.4e-1557.14Show/hide
Query:  MCYLVQCKQCNKTSWKGCGEHLVDLYNRVEKGNHCTCRPWPGVVVPSEDAADMKTPQSSTANS
        MC+ V+CKQC KTSW GCG+HL DLY+ +E+G HC CR WPGVVVP++      T Q S A++
Subjt:  MCYLVQCKQCNKTSWKGCGEHLVDLYNRVEKGNHCTCRPWPGVVVPSEDAADMKTPQSSTANS

U5G8E8 Uncharacterized protein1.0e-1448.75Show/hide
Query:  MCYLVQCKQCNKTSWKGCGEHLVDLYNRVEKGNHCTCRPWPGVVVPSED-AADMKTPQSSTANSKSIPEGTATLELDSSK
        MCY V CKQCNK SW GCG HL  +Y  +EKG HCTC+PWPGVV+ +E+ AA+ +  ++ +ANS +     +  ++D+ K
Subjt:  MCYLVQCKQCNKTSWKGCGEHLVDLYNRVEKGNHCTCRPWPGVVVPSED-AADMKTPQSSTANSKSIPEGTATLELDSSK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTTATCTTGTGCAGTGCAAGCAGTGCAATAAAACCTCATGGAAGGGCTGTGGCGAGCACCTTGTTGATCTCTACAACCGAGTAGAAAAGGGAAACCACTGCACCTG
CCGCCCTTGGCCGGGCGTCGTTGTGCCATCAGAAGATGCCGCCGACATGAAGACACCACAATCATCGACCGCAAACTCGAAGTCTATCCCAGAAGGTACGGCTACACTAG
AACTGGACTCTTCTAAGGATAGAAGTTTGAGATTTGTGAAAGGATGGACGAAGTTTGAGAATTGCAAACGAATGATTATAACAAATTTCGATGGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTGTTATCTTGTGCAGTGCAAGCAGTGCAATAAAACCTCATGGAAGGGCTGTGGCGAGCACCTTGTTGATCTCTACAACCGAGTAGAAAAGGGAAACCACTGCACCTG
CCGCCCTTGGCCGGGCGTCGTTGTGCCATCAGAAGATGCCGCCGACATGAAGACACCACAATCATCGACCGCAAACTCGAAGTCTATCCCAGAAGGTACGGCTACACTAG
AACTGGACTCTTCTAAGGATAGAAGTTTGAGATTTGTGAAAGGATGGACGAAGTTTGAGAATTGCAAACGAATGATTATAACAAATTTCGATGGGTAG
Protein sequenceShow/hide protein sequence
MCYLVQCKQCNKTSWKGCGEHLVDLYNRVEKGNHCTCRPWPGVVVPSEDAADMKTPQSSTANSKSIPEGTATLELDSSKDRSLRFVKGWTKFENCKRMIITNFDG