; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0008287 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0008287
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionSFRICE_002917
Genome locationchr9:16679583..16680971
RNA-Seq ExpressionLag0008287
SyntenyLag0008287
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GBC03794.1 hypothetical protein RclHR1_05320011 [Rhizophagus clarus]2.4e-0938.85Show/hide
Query:  GERPSLILPE-SGVDHCLRQDVKGERPSLIPPE-SGVDHCLRQDVKGERPSLIPPE-SGVDHCLRQDVKGERPSLIPPE-SGVDHCLRQDVKGERPSLIP
        G  P  I PE    D   R D +G  P  IPPE    D   R D +G  P  IPPE    D   R D +G  P  IPPE    D   R D +G  P  IP
Subjt:  GERPSLILPE-SGVDHCLRQDVKGERPSLIPPE-SGVDHCLRQDVKGERPSLIPPE-SGVDHCLRQDVKGERPSLIPPE-SGVDHCLRQDVKGERPSLIP

Query:  PE-SGVDHYLRQDVKGERPSLIPPE-SGVDHCLRQDVNG
        PE    D   R D +G  P  IPPE    D  +R D  G
Subjt:  PE-SGVDHYLRQDVKGERPSLIPPE-SGVDHCLRQDVNG

GES89537.1 zinc knuckle transcription factor (CnjB), putative [Rhizophagus clarus]2.4e-0938.85Show/hide
Query:  GERPSLILPE-SGVDHCLRQDVKGERPSLIPPE-SGVDHCLRQDVKGERPSLIPPE-SGVDHCLRQDVKGERPSLIPPE-SGVDHCLRQDVKGERPSLIP
        G  P  I PE    D   R D +G  P  IPPE    D   R D +G  P  IPPE    D   R D +G  P  IPPE    D   R D +G  P  IP
Subjt:  GERPSLILPE-SGVDHCLRQDVKGERPSLIPPE-SGVDHCLRQDVKGERPSLIPPE-SGVDHCLRQDVKGERPSLIPPE-SGVDHCLRQDVKGERPSLIP

Query:  PE-SGVDHYLRQDVKGERPSLIPPE-SGVDHCLRQDVNG
        PE    D   R D +G  P  IPPE    D  +R D  G
Subjt:  PE-SGVDHYLRQDVKGERPSLIPPE-SGVDHCLRQDVNG

GES89538.1 zinc knuckle transcription factor (CnjB), putative [Rhizophagus clarus]2.4e-0938.85Show/hide
Query:  GERPSLILPE-SGVDHCLRQDVKGERPSLIPPE-SGVDHCLRQDVKGERPSLIPPE-SGVDHCLRQDVKGERPSLIPPE-SGVDHCLRQDVKGERPSLIP
        G  P  I PE    D   R D +G  P  IPPE    D   R D +G  P  IPPE    D   R D +G  P  IPPE    D   R D +G  P  IP
Subjt:  GERPSLILPE-SGVDHCLRQDVKGERPSLIPPE-SGVDHCLRQDVKGERPSLIPPE-SGVDHCLRQDVKGERPSLIPPE-SGVDHCLRQDVKGERPSLIP

Query:  PE-SGVDHYLRQDVKGERPSLIPPE-SGVDHCLRQDVNG
        PE    D   R D +G  P  IPPE    D  +R D  G
Subjt:  PE-SGVDHYLRQDVKGERPSLIPPE-SGVDHCLRQDVNG

XP_010008946.1 PREDICTED: LOW QUALITY PROTEIN: aggrecan core protein-like [Nestor notabilis]1.6e-0528.87Show/hide
Query:  ASYSKVGSGERPSLILPESGVDHCLRQDVKGERPSLIPPESGVDHCLRQDVKGERPSLIPPESGVDHCLRQDVKGERPSLIPPESGVDHCLRQDVKGERP
        AS S   SGE  +  LPESGV+     ++ GE P+   PE   +    Q++ GE  +   PE+ ++    Q++ GE      PE  ++    Q+V GE  
Subjt:  ASYSKVGSGERPSLILPESGVDHCLRQDVKGERPSLIPPESGVDHCLRQDVKGERPSLIPPESGVDHCLRQDVKGERPSLIPPESGVDHCLRQDVKGERP

Query:  SLIPPESGVDHYLRQDVKGERPSLIPPESGVDHCLRQDVNGK
        +   P+S  +    Q++ GE  +   PE  ++    QD++G+
Subjt:  SLIPPESGVDHYLRQDVKGERPSLIPPESGVDHCLRQDVNGK

XP_035452609.1 zinc finger MYM-type protein 3-like isoform X1 [Spodoptera frugiperda]1.4e-0438.1Show/hide
Query:  PSSKVLTRFAAPPSSRVLTSLRCSCLPPSLRVLTRSAAVAFPPKFEGSHVASLQLPSSNCL-----PPSSKVLTRFAAPPSSRVLTRFDAPPSSKVLPCV
        PS+K LT  + PPS++ LT++     PPS + LT     A  P  + +  A L  PS+  L     PPS+K LT  + PPS++ LT    PPS+K L  +
Subjt:  PSSKVLTRFAAPPSSRVLTSLRCSCLPPSLRVLTRSAAVAFPPKFEGSHVASLQLPSSNCL-----PPSSKVLTRFAAPPSSRVLTRFDAPPSSKVLPCV

Query:  AATPS
        ++ PS
Subjt:  AATPS

TrEMBL top hitse value%identityAlignment
A0A2H1VG84 SFRICE_0029171.5e-0433.33Show/hide
Query:  SCLPPSSKVLTRFAAPPSSRVLTSLRCSCLPPSLRVLTRSAAVAFPPKFEGSHVASLQLPSSN------CLPPSSKVLTRFAAPPSSRVLTRFDAPPSSK
        + +PPS+K  T   +PPS++ LT++R     PS +  T     A PP+     + ++  P S         PPS+K LT  + PPS++ LT    PPS K
Subjt:  SCLPPSSKVLTRFAAPPSSRVLTSLRCSCLPPSLRVLTRSAAVAFPPKFEGSHVASLQLPSSN------CLPPSSKVLTRFAAPPSSRVLTRFDAPPSSK

Query:  VLPCVAATPSL
         L  +++T +L
Subjt:  VLPCVAATPSL

A0A2Z6RMX6 Uncharacterized protein1.2e-0938.85Show/hide
Query:  GERPSLILPE-SGVDHCLRQDVKGERPSLIPPE-SGVDHCLRQDVKGERPSLIPPE-SGVDHCLRQDVKGERPSLIPPE-SGVDHCLRQDVKGERPSLIP
        G  P  I PE    D   R D +G  P  IPPE    D   R D +G  P  IPPE    D   R D +G  P  IPPE    D   R D +G  P  IP
Subjt:  GERPSLILPE-SGVDHCLRQDVKGERPSLIPPE-SGVDHCLRQDVKGERPSLIPPE-SGVDHCLRQDVKGERPSLIPPE-SGVDHCLRQDVKGERPSLIP

Query:  PE-SGVDHYLRQDVKGERPSLIPPE-SGVDHCLRQDVNG
        PE    D   R D +G  P  IPPE    D  +R D  G
Subjt:  PE-SGVDHYLRQDVKGERPSLIPPE-SGVDHCLRQDVNG

A0A673Y8M2 Uncharacterized protein5.4e-0727.66Show/hide
Query:  CCRFFFKLRVSIVLSSS-------SKLAVDGIVSSPKSTIDDLASYSKVGSGERPSLILPESGVDHCLRQDVKGERPSLIPPESGVDHCLRQDVKGERPS
        C R F  + +S+ LS S         LA+   ++  K  ID L      G   +  +ILP S  D  L   ++G+R  ++PP +G D  L   ++G+R  
Subjt:  CCRFFFKLRVSIVLSSS-------SKLAVDGIVSSPKSTIDDLASYSKVGSGERPSLILPESGVDHCLRQDVKGERPSLIPPESGVDHCLRQDVKGERPS

Query:  LIPPESGVDHCLRQDVKGERPSLIPPESGVDHCLRQDVKGERPSLIPPESG---VDHYLRQDVKGERPSLIPPESGVDHCLRQDVNGK
        ++PP +G D  L   ++G++  ++PP +G +  L   ++G++  ++PP +G   +   L+  ++G++  ++PP +G D  L   + GK
Subjt:  LIPPESGVDHCLRQDVKGERPSLIPPESGVDHCLRQDVKGERPSLIPPESG---VDHYLRQDVKGERPSLIPPESGVDHCLRQDVNGK

A0A673Y8W8 Uncharacterized protein1.1e-0728.65Show/hide
Query:  CCRFFFKLRVSIVLSSS-------SKLAVDGIVSSPKSTIDDLASYSKVGSGERPSLILPESGVDHCLRQDVKGERPSLIPPESGVDHCLRQDVKGERPS
        C R F  + +S+ LS S         LA+   ++  K  ID L      G   +  +ILP S  D  L   ++G+R  ++PP +G D  L   ++G+R  
Subjt:  CCRFFFKLRVSIVLSSS-------SKLAVDGIVSSPKSTIDDLASYSKVGSGERPSLILPESGVDHCLRQDVKGERPSLIPPESGVDHCLRQDVKGERPS

Query:  LIPPESGVDHCLRQDVKGERPSLIPPESGVDHCLRQDVKGERPSLIPPESGVDHYLRQDVKGERPSLIPPESGVDHCLRQDVNGK
        ++PP +G D  L   ++G++  ++PP +G +  L   ++G++  ++PP +G D  L   ++G++  ++PP +G D  L   + GK
Subjt:  LIPPESGVDHCLRQDVKGERPSLIPPESGVDHCLRQDVKGERPSLIPPESGVDHYLRQDVKGERPSLIPPESGVDHCLRQDVNGK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGTTGTGCACCGTTATGAATGTGAGACTATGAGTTGGATGAATAACAGAAGACTTCATTCCTCCAAATTTGATGTCTCGCTCGCCTCAAGTTCGGTGTTCCACTC
ACCCCAAGTTCGAAGGTTCTCTCACGCGCTTTGCTGCAGTTGCCTTCCTCCAAGTTCGAAGGTTCTCACACGCTTTGCTGCACCTCCAAGTTCGAGGGTTCTCACGTCGC
TTCGCTGCAGTTGCCTTCCTCCAAGTTTGAGGGTTCTCACGCGCTCCGCTGCAGTTGCCTTCCCTCCAAAGTTTGAGGGTTCTCACGTCGCTTCGCTGCAGTTGCCTTCC
TCCAATTGCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTTGCTGCACCTCCAAGTTCGAGGGTTCTCACGCGCTTTGATGCACCTCCAAGTTCGAAGGTTCTCCCATG
CGTCGCTGCAACTCCTTCTCTCCAAGTTCGAAGGAGGTTTTCACGTTGCTTCGTTGCAGTACCTTCTCTTCAAGCTCGAAGGTTCTCCTACGCTTCGTTGTTGTTCCTTC
CTCAAAGTTCAAAGGTTCTCCACTGCTGTCGTTTCTTCTTCAAGTTGAGAGTTTCTATCGTTCTTTCATCAAGCTCGAAGTTGGCGGTTGACGGCATCGTTTCATCTCCA
AAGTCGACGATTGACGACCTCGCTTCATATTCAAAGGTTGGCAGTGGCGAGAGACCATCCTTAATTCTGCCTGAATCAGGGGTTGATCACTGCCTGAGGCAAGATGTGAA
GGGCGAGAGACCATCCTTAATTCCGCCTGAATCAGGGGTTGATCACTGCCTGAGGCAAGATGTGAAGGGCGAGAGACCATCCTTAATTCCGCCTGAATCAGGGGTTGATC
ACTGCCTGAGGCAAGATGTGAAGGGCGAGAGACCATCCTTAATTCCGCCTGAATCAGGGGTTGATCACTGCCTGAGACAAGATGTGAAGGGCGAGAGACCATCCTTAATT
CCGCCTGAATCAGGGGTTGATCACTACCTGAGGCAAGATGTGAAGGGCGAGAGACCATCCTTAATTCCACCTGAATCAGGGGTTGATCACTGCCTGAGGCAAGATGTGAA
CGGCAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGTTGTGCACCGTTATGAATGTGAGACTATGAGTTGGATGAATAACAGAAGACTTCATTCCTCCAAATTTGATGTCTCGCTCGCCTCAAGTTCGGTGTTCCACTC
ACCCCAAGTTCGAAGGTTCTCTCACGCGCTTTGCTGCAGTTGCCTTCCTCCAAGTTCGAAGGTTCTCACACGCTTTGCTGCACCTCCAAGTTCGAGGGTTCTCACGTCGC
TTCGCTGCAGTTGCCTTCCTCCAAGTTTGAGGGTTCTCACGCGCTCCGCTGCAGTTGCCTTCCCTCCAAAGTTTGAGGGTTCTCACGTCGCTTCGCTGCAGTTGCCTTCC
TCCAATTGCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTTGCTGCACCTCCAAGTTCGAGGGTTCTCACGCGCTTTGATGCACCTCCAAGTTCGAAGGTTCTCCCATG
CGTCGCTGCAACTCCTTCTCTCCAAGTTCGAAGGAGGTTTTCACGTTGCTTCGTTGCAGTACCTTCTCTTCAAGCTCGAAGGTTCTCCTACGCTTCGTTGTTGTTCCTTC
CTCAAAGTTCAAAGGTTCTCCACTGCTGTCGTTTCTTCTTCAAGTTGAGAGTTTCTATCGTTCTTTCATCAAGCTCGAAGTTGGCGGTTGACGGCATCGTTTCATCTCCA
AAGTCGACGATTGACGACCTCGCTTCATATTCAAAGGTTGGCAGTGGCGAGAGACCATCCTTAATTCTGCCTGAATCAGGGGTTGATCACTGCCTGAGGCAAGATGTGAA
GGGCGAGAGACCATCCTTAATTCCGCCTGAATCAGGGGTTGATCACTGCCTGAGGCAAGATGTGAAGGGCGAGAGACCATCCTTAATTCCGCCTGAATCAGGGGTTGATC
ACTGCCTGAGGCAAGATGTGAAGGGCGAGAGACCATCCTTAATTCCGCCTGAATCAGGGGTTGATCACTGCCTGAGACAAGATGTGAAGGGCGAGAGACCATCCTTAATT
CCGCCTGAATCAGGGGTTGATCACTACCTGAGGCAAGATGTGAAGGGCGAGAGACCATCCTTAATTCCACCTGAATCAGGGGTTGATCACTGCCTGAGGCAAGATGTGAA
CGGCAAATGA
Protein sequenceShow/hide protein sequence
MEVVHRYECETMSWMNNRRLHSSKFDVSLASSSVFHSPQVRRFSHALCCSCLPPSSKVLTRFAAPPSSRVLTSLRCSCLPPSLRVLTRSAAVAFPPKFEGSHVASLQLPS
SNCLPPSSKVLTRFAAPPSSRVLTRFDAPPSSKVLPCVAATPSLQVRRRFSRCFVAVPSLQARRFSYASLLFLPQSSKVLHCCRFFFKLRVSIVLSSSSKLAVDGIVSSP
KSTIDDLASYSKVGSGERPSLILPESGVDHCLRQDVKGERPSLIPPESGVDHCLRQDVKGERPSLIPPESGVDHCLRQDVKGERPSLIPPESGVDHCLRQDVKGERPSLI
PPESGVDHYLRQDVKGERPSLIPPESGVDHCLRQDVNGK