; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0008300 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0008300
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase, RNA-dependent DNA polymerase
Genome locationchr9:17062737..17063621
RNA-Seq ExpressionLag0008300
SyntenyLag0008300
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026100.1 uncharacterized protein E6C27_scaffold19G00360 [Cucumis melo var. makuwa]1.8e-5957.85Show/hide
Query:  MANANSTGFPAASTGTTNFSSPPLNQLLNQITSIKLDRGNFLLWKNLALPILRSYKLEGYLSGLKPYPPKFIQAATSSSPPSSTGEGAIDEATATRQTTP
        MANA  T  P  S  +  FS+PPLNQ+LNQ+ ++KLDR N+LLWK LALPIL+ YKLEG+L+G  P P  F+ +A SSS  + T EGA     A+   TP
Subjt:  MANANSTGFPAASTGTTNFSSPPLNQLLNQITSIKLDRGNFLLWKNLALPILRSYKLEGYLSGLKPYPPKFIQAATSSSPPSSTGEGAIDEATATRQTTP

Query:  ---NPDYESWIAIDQLLLGWLYNSMSLEVATQVMGFENAQDLWAAVQELFGVQSRAEEDYLRQVFQQSRKGNLKMADYLRVMKNHADNLGQAGSPVTTRS
           N  +E W+  D LLLGWLYNSM+ +VA Q+MGF N +DLW A Q+ FGVQSRAEED+LRQ+ Q +RKGN KM +YL VMK + DNLGQ GSPV  R+
Subjt:  ---NPDYESWIAIDQLLLGWLYNSMSLEVATQVMGFENAQDLWAAVQELFGVQSRAEEDYLRQVFQQSRKGNLKMADYLRVMKNHADNLGQAGSPVTTRS

Query:  LVSEVLLGLDEEYNPVVEMIQGR
        L+S+VLLGLDE YN V+ +IQG+
Subjt:  LVSEVLLGLDEEYNPVVEMIQGR

KAA0067279.1 uncharacterized protein E6C27_scaffold418G001000 [Cucumis melo var. makuwa]1.3e-4954.27Show/hide
Query:  NSTGFPAASTGTTNFSSPPLNQLLNQITSIKLDRGNFLLWKNLALPILRSYKLEGYLSGLKPYPPKFIQAATSSSPPSSTGEGAIDEATATRQT---TPN
        N+      +T TT+F++P LNQ+LNQ+T+IKLDRGN+LLWK LALPIL+SYKL  +L G  P  PK I   T  +       G   + T++  T   T N
Subjt:  NSTGFPAASTGTTNFSSPPLNQLLNQITSIKLDRGNFLLWKNLALPILRSYKLEGYLSGLKPYPPKFIQAATSSSPPSSTGEGAIDEATATRQT---TPN

Query:  PDYESWIAIDQLLLGWLYNSMSLEVATQVMGFENAQDLWAAVQELFGVQSRAEEDYLRQVFQQSRKGNLKMADYLRVMKNHADNLGQAGSPVTTRSLVS
        P YE WI  D LLLGWLYNSM+ EV  Q+MGF NA+DLW A Q+LFG+QSRA+ED+L Q FQ ++KGNL M +YLR MKN+ +NLGQA S V + ++VS
Subjt:  PDYESWIAIDQLLLGWLYNSMSLEVATQVMGFENAQDLWAAVQELFGVQSRAEEDYLRQVFQQSRKGNLKMADYLRVMKNHADNLGQAGSPVTTRSLVS

TYJ96311.1 uncharacterized protein E5676_scaffold1970G00140 [Cucumis melo var. makuwa]3.7e-5256.86Show/hide
Query:  MANANSTGFPAASTGTTNFSSPPLNQLLNQITSIKLDRGNFLLWKNLALPILRSYKLEGYLSGLKPYPPKFIQAATSSSPPSSTGEGAIDEATATRQTTP
        MANA  T  P  S  +  FS+PPLNQ+LNQ+ ++KLDR N+LLWK LALPIL+ YKLEG+L+G  P P  F+ +A SSS  + T EGA     A+   TP
Subjt:  MANANSTGFPAASTGTTNFSSPPLNQLLNQITSIKLDRGNFLLWKNLALPILRSYKLEGYLSGLKPYPPKFIQAATSSSPPSSTGEGAIDEATATRQTTP

Query:  ---NPDYESWIAIDQLLLGWLYNSMSLEVATQVMGFENAQDLWAAVQELFGVQSRAEEDYLRQVFQQSRKGNLKMADYLRVMKNHADNLGQAGSPVTTRS
           N  +E W+  D LLLGWLYNSM+ +VA Q+MGF N +DLW A Q+ FGVQSRAEED+LRQ+ Q +RKGN KM +YL VMK + DNLGQ GSPV  R+
Subjt:  ---NPDYESWIAIDQLLLGWLYNSMSLEVATQVMGFENAQDLWAAVQELFGVQSRAEEDYLRQVFQQSRKGNLKMADYLRVMKNHADNLGQAGSPVTTRS

Query:  LVSE
        L+S+
Subjt:  LVSE

XP_022151683.1 uncharacterized protein LOC111019598 [Momordica charantia]3.3e-6151.41Show/hide
Query:  PAASTGTTNFSSPPLNQLLNQITSIKLDRGNFLLWKNLALPILRSYKLEGYLSGLKPYPPKFIQAATSSSPPSSTGEGAIDEATATRQTTPNPDYESWIA
        PA  +G   F+SPPLNQLLNQITSIK+DRGNFLLW+NLALPILRSYKL  YL+G KP PP  +        P+ T        ++    T NP YE+WI 
Subjt:  PAASTGTTNFSSPPLNQLLNQITSIKLDRGNFLLWKNLALPILRSYKLEGYLSGLKPYPPKFIQAATSSSPPSSTGEGAIDEATATRQTTPNPDYESWIA

Query:  IDQLLLGWLYNSMSLEVATQVMGFENAQDLWAAVQELFGVQSRAEEDYLRQVFQQSRKGNLKMADYLRVMKNHADNLGQAGSPVTTRSLVSEVLLGLDEE
        +D+LLLGWLYNSM+ +VA QVMGF  +++LW AVQELFGVQSRAE DYL+QVFQQ+ KG+L+M +YL++MK+HADNL  AGS V+ R LVS+VL GLDEE
Subjt:  IDQLLLGWLYNSMSLEVATQVMGFENAQDLWAAVQELFGVQSRAEEDYLRQVFQQSRKGNLKMADYLRVMKNHADNLGQAGSPVTTRSLVSEVLLGLDEE

Query:  YNPVVEMIQGRIATS--------------VNMASSKDTGTQRNQSSS----------------TNGRSNNFGRGNLRGGG-QRG
        YNP+V  +QG++  S              +   +S  +G   NQ+ +                TN  +N+ G    RGGG QRG
Subjt:  YNPVVEMIQGRIATS--------------VNMASSKDTGTQRNQSSS----------------TNGRSNNFGRGNLRGGG-QRG

XP_038902487.1 uncharacterized protein LOC120089143 [Benincasa hispida]8.7e-5452.46Show/hide
Query:  TSIKLDRGNFLLWKNLALPILRSYKLEGYLSGLKPYPPKFIQA---ATSSSPPSSTG---------------EGAIDEATATRQTTPNPDYESWIAIDQL
        T+IKLD+ N+LLW+NLALPILRSY+LEG+L+G  P PP+F  A   +T++ PP                   +G    + ++     NP YES   +DQL
Subjt:  TSIKLDRGNFLLWKNLALPILRSYKLEGYLSGLKPYPPKFIQA---ATSSSPPSSTG---------------EGAIDEATATRQTTPNPDYESWIAIDQL

Query:  LLGWLYNSMSLEVATQVMGFENAQDLWAAVQELFGVQSRAEEDYLRQVFQQSRKGNLKMADYLRVMKNHADNLGQAGSPVTTRSLVSEVLLGLDEEYNPV
        LLGWLYN M+ EVA QVMG+EN + LWAA+QELFG+QSRA EDYLRQVFQQ+ KG +KM +YLRVMK H+DNLG  GSPV TR+LVS+VLLGLDEE+NP 
Subjt:  LLGWLYNSMSLEVATQVMGFENAQDLWAAVQELFGVQSRAEEDYLRQVFQQSRKGNLKMADYLRVMKNHADNLGQAGSPVTTRSLVSEVLLGLDEEYNPV

Query:  VEMIQGRIATSVNMASSKDTGTQRNQSSSTNGRSNNFGRGNLRG
        V  IQGR   S     ++    ++ Q+++ N R    G G  RG
Subjt:  VEMIQGRIATSVNMASSKDTGTQRNQSSSTNGRSNNFGRGNLRG

TrEMBL top hitse value%identityAlignment
A0A5A7SIT7 Uncharacterized protein8.8e-6057.85Show/hide
Query:  MANANSTGFPAASTGTTNFSSPPLNQLLNQITSIKLDRGNFLLWKNLALPILRSYKLEGYLSGLKPYPPKFIQAATSSSPPSSTGEGAIDEATATRQTTP
        MANA  T  P  S  +  FS+PPLNQ+LNQ+ ++KLDR N+LLWK LALPIL+ YKLEG+L+G  P P  F+ +A SSS  + T EGA     A+   TP
Subjt:  MANANSTGFPAASTGTTNFSSPPLNQLLNQITSIKLDRGNFLLWKNLALPILRSYKLEGYLSGLKPYPPKFIQAATSSSPPSSTGEGAIDEATATRQTTP

Query:  ---NPDYESWIAIDQLLLGWLYNSMSLEVATQVMGFENAQDLWAAVQELFGVQSRAEEDYLRQVFQQSRKGNLKMADYLRVMKNHADNLGQAGSPVTTRS
           N  +E W+  D LLLGWLYNSM+ +VA Q+MGF N +DLW A Q+ FGVQSRAEED+LRQ+ Q +RKGN KM +YL VMK + DNLGQ GSPV  R+
Subjt:  ---NPDYESWIAIDQLLLGWLYNSMSLEVATQVMGFENAQDLWAAVQELFGVQSRAEEDYLRQVFQQSRKGNLKMADYLRVMKNHADNLGQAGSPVTTRS

Query:  LVSEVLLGLDEEYNPVVEMIQGR
        L+S+VLLGLDE YN V+ +IQG+
Subjt:  LVSEVLLGLDEEYNPVVEMIQGR

A0A5A7VPY0 Uncharacterized protein6.3e-5054.27Show/hide
Query:  NSTGFPAASTGTTNFSSPPLNQLLNQITSIKLDRGNFLLWKNLALPILRSYKLEGYLSGLKPYPPKFIQAATSSSPPSSTGEGAIDEATATRQT---TPN
        N+      +T TT+F++P LNQ+LNQ+T+IKLDRGN+LLWK LALPIL+SYKL  +L G  P  PK I   T  +       G   + T++  T   T N
Subjt:  NSTGFPAASTGTTNFSSPPLNQLLNQITSIKLDRGNFLLWKNLALPILRSYKLEGYLSGLKPYPPKFIQAATSSSPPSSTGEGAIDEATATRQT---TPN

Query:  PDYESWIAIDQLLLGWLYNSMSLEVATQVMGFENAQDLWAAVQELFGVQSRAEEDYLRQVFQQSRKGNLKMADYLRVMKNHADNLGQAGSPVTTRSLVS
        P YE WI  D LLLGWLYNSM+ EV  Q+MGF NA+DLW A Q+LFG+QSRA+ED+L Q FQ ++KGNL M +YLR MKN+ +NLGQA S V + ++VS
Subjt:  PDYESWIAIDQLLLGWLYNSMSLEVATQVMGFENAQDLWAAVQELFGVQSRAEEDYLRQVFQQSRKGNLKMADYLRVMKNHADNLGQAGSPVTTRSLVS

A0A5D3BCH9 Uncharacterized protein1.8e-5256.86Show/hide
Query:  MANANSTGFPAASTGTTNFSSPPLNQLLNQITSIKLDRGNFLLWKNLALPILRSYKLEGYLSGLKPYPPKFIQAATSSSPPSSTGEGAIDEATATRQTTP
        MANA  T  P  S  +  FS+PPLNQ+LNQ+ ++KLDR N+LLWK LALPIL+ YKLEG+L+G  P P  F+ +A SSS  + T EGA     A+   TP
Subjt:  MANANSTGFPAASTGTTNFSSPPLNQLLNQITSIKLDRGNFLLWKNLALPILRSYKLEGYLSGLKPYPPKFIQAATSSSPPSSTGEGAIDEATATRQTTP

Query:  ---NPDYESWIAIDQLLLGWLYNSMSLEVATQVMGFENAQDLWAAVQELFGVQSRAEEDYLRQVFQQSRKGNLKMADYLRVMKNHADNLGQAGSPVTTRS
           N  +E W+  D LLLGWLYNSM+ +VA Q+MGF N +DLW A Q+ FGVQSRAEED+LRQ+ Q +RKGN KM +YL VMK + DNLGQ GSPV  R+
Subjt:  ---NPDYESWIAIDQLLLGWLYNSMSLEVATQVMGFENAQDLWAAVQELFGVQSRAEEDYLRQVFQQSRKGNLKMADYLRVMKNHADNLGQAGSPVTTRS

Query:  LVSE
        L+S+
Subjt:  LVSE

A0A6J1D5J0 uncharacterized protein LOC1110175014.1e-4961.5Show/hide
Query:  FIQAATSSSPPSSTGEGAIDEATATRQTTPNPDYESWIAIDQLLLGWLYNSMSLEVATQVMGFENAQDLWAAVQELFGVQSRAEEDYLRQVFQQSRKGNL
        F+Q +  +   S T   A   ++   +   NP YESW+  DQLLLGWLYNSM+ EVATQVMG+ENA DLWAA+QELFGVQS+AEEDYLRQVFQQ+RKG+L
Subjt:  FIQAATSSSPPSSTGEGAIDEATATRQTTPNPDYESWIAIDQLLLGWLYNSMSLEVATQVMGFENAQDLWAAVQELFGVQSRAEEDYLRQVFQQSRKGNL

Query:  KMADYLRVMKNHADNLGQAGSPVTTRSLVSEVLLGLDEEYNPVVEMIQGRIATS-VNMAS---SKDTGTQRNQSSSTNGRSNNFGRG
        KM D+LRVMK+HADNLGQAGSPV TRSL+S+VLLGLDEEYNPVV  IQG+   S   M +   S   G QR   +S    +NN G G
Subjt:  KMADYLRVMKNHADNLGQAGSPVTTRSLVSEVLLGLDEEYNPVVEMIQGRIATS-VNMAS---SKDTGTQRNQSSSTNGRSNNFGRG

A0A6J1DCW4 uncharacterized protein LOC1110195981.6e-6151.41Show/hide
Query:  PAASTGTTNFSSPPLNQLLNQITSIKLDRGNFLLWKNLALPILRSYKLEGYLSGLKPYPPKFIQAATSSSPPSSTGEGAIDEATATRQTTPNPDYESWIA
        PA  +G   F+SPPLNQLLNQITSIK+DRGNFLLW+NLALPILRSYKL  YL+G KP PP  +        P+ T        ++    T NP YE+WI 
Subjt:  PAASTGTTNFSSPPLNQLLNQITSIKLDRGNFLLWKNLALPILRSYKLEGYLSGLKPYPPKFIQAATSSSPPSSTGEGAIDEATATRQTTPNPDYESWIA

Query:  IDQLLLGWLYNSMSLEVATQVMGFENAQDLWAAVQELFGVQSRAEEDYLRQVFQQSRKGNLKMADYLRVMKNHADNLGQAGSPVTTRSLVSEVLLGLDEE
        +D+LLLGWLYNSM+ +VA QVMGF  +++LW AVQELFGVQSRAE DYL+QVFQQ+ KG+L+M +YL++MK+HADNL  AGS V+ R LVS+VL GLDEE
Subjt:  IDQLLLGWLYNSMSLEVATQVMGFENAQDLWAAVQELFGVQSRAEEDYLRQVFQQSRKGNLKMADYLRVMKNHADNLGQAGSPVTTRSLVSEVLLGLDEE

Query:  YNPVVEMIQGRIATS--------------VNMASSKDTGTQRNQSSS----------------TNGRSNNFGRGNLRGGG-QRG
        YNP+V  +QG++  S              +   +S  +G   NQ+ +                TN  +N+ G    RGGG QRG
Subjt:  YNPVVEMIQGRIATS--------------VNMASSKDTGTQRNQSSS----------------TNGRSNNFGRGNLRGGG-QRG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G34070.1 CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162)7.2e-0631.76Show/hide
Query:  AQDLWAAVQELFGVQSRAEEDYLRQVFQQSRKGNLKMADYLRVMKNHADNLGQAGSPVTTRSLVSEVLLGLDEEYNPVVEMIQGR
        ++D+W  ++  F     A    L    +    G++++ADY R MK  AD+L     PVT R+LV  VL GL+ +++ ++ +I+ R
Subjt:  AQDLWAAVQELFGVQSRAEEDYLRQVFQQSRKGNLKMADYLRVMKNHADNLGQAGSPVTTRSLVSEVLLGLDEEYNPVVEMIQGR

AT5G48050.1 CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162)2.5e-0626.02Show/hide
Query:  TTPNPDYES-WIAIDQLLLGWLYNSMSLEVATQVMGFE-NAQDLWAAVQELFGVQSRAEEDYLRQVFQQSRKGNLKMADYLRVMKNHADNLGQAGSPVTT
        +TP P  E  W   D L+  W+Y +++  +   ++     A+DLW +++ LF     A         + +   +L + +Y + +K+ +D L    SP++ 
Subjt:  TTPNPDYES-WIAIDQLLLGWLYNSMSLEVATQVMGFE-NAQDLWAAVQELFGVQSRAEEDYLRQVFQQSRKGNLKMADYLRVMKNHADNLGQAGSPVTT

Query:  RSLVSEVLLGLDEEYNPVVEMIQ
        R LV  +L GL E+Y+ ++ +I+
Subjt:  RSLVSEVLLGLDEEYNPVVEMIQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAACGCCAATTCAACCGGTTTTCCTGCCGCCTCCACCGGAACTACAAATTTCAGTAGTCCTCCGCTAAATCAACTGTTGAACCAAATAACCTCTATAAAGCTCGA
TAGAGGTAACTTTTTGTTATGGAAAAACCTGGCATTACCAATTTTACGCAGCTACAAACTGGAAGGGTATTTGTCTGGTTTGAAGCCCTATCCTCCGAAGTTTATTCAAG
CTGCGACCAGCTCCTCTCCCCCATCGTCGACTGGAGAAGGAGCCATTGATGAAGCAACTGCAACAAGGCAGACAACTCCCAATCCAGATTATGAGTCGTGGATTGCCATT
GATCAACTTCTATTGGGTTGGCTTTACAACTCTATGTCTCTTGAGGTAGCCACCCAAGTAATGGGATTCGAGAATGCTCAAGATCTGTGGGCAGCGGTTCAAGAGTTGTT
CGGTGTTCAATCTCGAGCAGAGGAAGACTACTTACGTCAGGTATTTCAACAGTCAAGAAAAGGTAATTTAAAAATGGCTGACTATCTTCGTGTTATGAAAAATCACGCTG
ACAACTTAGGGCAAGCTGGGAGTCCAGTTACCACCCGATCTCTTGTGTCAGAAGTTCTTTTAGGGTTAGATGAAGAGTACAACCCTGTTGTGGAGATGATTCAAGGCAGA
ATAGCCACCTCAGTGAACATGGCTAGCTCCAAAGATACTGGTACACAGAGGAATCAAAGCTCATCGACCAATGGAAGATCAAACAATTTTGGCCGTGGAAATCTTCGAGG
AGGAGGACAACGTGGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCAACGCCAATTCAACCGGTTTTCCTGCCGCCTCCACCGGAACTACAAATTTCAGTAGTCCTCCGCTAAATCAACTGTTGAACCAAATAACCTCTATAAAGCTCGA
TAGAGGTAACTTTTTGTTATGGAAAAACCTGGCATTACCAATTTTACGCAGCTACAAACTGGAAGGGTATTTGTCTGGTTTGAAGCCCTATCCTCCGAAGTTTATTCAAG
CTGCGACCAGCTCCTCTCCCCCATCGTCGACTGGAGAAGGAGCCATTGATGAAGCAACTGCAACAAGGCAGACAACTCCCAATCCAGATTATGAGTCGTGGATTGCCATT
GATCAACTTCTATTGGGTTGGCTTTACAACTCTATGTCTCTTGAGGTAGCCACCCAAGTAATGGGATTCGAGAATGCTCAAGATCTGTGGGCAGCGGTTCAAGAGTTGTT
CGGTGTTCAATCTCGAGCAGAGGAAGACTACTTACGTCAGGTATTTCAACAGTCAAGAAAAGGTAATTTAAAAATGGCTGACTATCTTCGTGTTATGAAAAATCACGCTG
ACAACTTAGGGCAAGCTGGGAGTCCAGTTACCACCCGATCTCTTGTGTCAGAAGTTCTTTTAGGGTTAGATGAAGAGTACAACCCTGTTGTGGAGATGATTCAAGGCAGA
ATAGCCACCTCAGTGAACATGGCTAGCTCCAAAGATACTGGTACACAGAGGAATCAAAGCTCATCGACCAATGGAAGATCAAACAATTTTGGCCGTGGAAATCTTCGAGG
AGGAGGACAACGTGGCTGA
Protein sequenceShow/hide protein sequence
MANANSTGFPAASTGTTNFSSPPLNQLLNQITSIKLDRGNFLLWKNLALPILRSYKLEGYLSGLKPYPPKFIQAATSSSPPSSTGEGAIDEATATRQTTPNPDYESWIAI
DQLLLGWLYNSMSLEVATQVMGFENAQDLWAAVQELFGVQSRAEEDYLRQVFQQSRKGNLKMADYLRVMKNHADNLGQAGSPVTTRSLVSEVLLGLDEEYNPVVEMIQGR
IATSVNMASSKDTGTQRNQSSSTNGRSNNFGRGNLRGGGQRG