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Lag0008309 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0008309
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionOcs element-binding factor 1-like
Genome locationchr9:17232468..17233562
RNA-Seq ExpressionLag0008309
SyntenyLag0008309
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG8634279.1 hypothetical protein MANES_17G023144v8 [Manihot esculenta]4.4e-0560.87Show/hide
Query:  VIQLADKSCIKPLGIVENVLVMVEDLVFPADFYVSDTPNPDYNPSS
        VIQLAD+S + P+G++E+VLV V++LVFPADFYV DT     N SS
Subjt:  VIQLADKSCIKPLGIVENVLVMVEDLVFPADFYVSDTPNPDYNPSS

KAG8642533.1 hypothetical protein MANES_12G095501v8 [Manihot esculenta]5.2e-0663.04Show/hide
Query:  VIQLADKSCIKPLGIVENVLVMVEDLVFPADFYVSDTPNPDYNPSS
        VIQLAD+S + P+G++E+VLV V +LVFPADFYV DT    YN SS
Subjt:  VIQLADKSCIKPLGIVENVLVMVEDLVFPADFYVSDTPNPDYNPSS

KAG8651813.1 hypothetical protein MANES_06G029160v8 [Manihot esculenta]5.2e-0663.04Show/hide
Query:  VIQLADKSCIKPLGIVENVLVMVEDLVFPADFYVSDTPNPDYNPSS
        VIQLAD+S + P+G++E+VLV V +LVFPADFYV DT    YN SS
Subjt:  VIQLADKSCIKPLGIVENVLVMVEDLVFPADFYVSDTPNPDYNPSS

KAG8662011.1 hypothetical protein MANES_01G054025v8 [Manihot esculenta]1.5e-0560.87Show/hide
Query:  VIQLADKSCIKPLGIVENVLVMVEDLVFPADFYVSDTPNPDYNPSS
        VIQL D+S + P+G++E+VLV V +LVFPADFYV DT    YN SS
Subjt:  VIQLADKSCIKPLGIVENVLVMVEDLVFPADFYVSDTPNPDYNPSS

RDX73363.1 Retrovirus-related Pol polyprotein, partial [Mucuna pruriens]1.2e-0546.55Show/hide
Query:  IQLADKSCIKPLGIVENVLVMVEDLVFPADFYVSDTPNPDYNPSSVDEHQITLTDKSG
        IQLA++S ++PLG++E+VL+ V +L+FPADFYV D  + +++ + +D H  TL+ K G
Subjt:  IQLADKSCIKPLGIVENVLVMVEDLVFPADFYVSDTPNPDYNPSSVDEHQITLTDKSG

TrEMBL top hitse value%identityAlignment
A0A0J8B6J3 BED-type domain-containing protein1.8e-0459.09Show/hide
Query:  SKHFTVIQLADKSCIKPLGIVENVLVMVEDLVFPADFYVSDTPN
        SK   VIQLAD+S + P+G++E+VLV V +LVFPADFY+ D  N
Subjt:  SKHFTVIQLADKSCIKPLGIVENVLVMVEDLVFPADFYVSDTPN

A0A2I4EMQ0 LOW QUALITY PROTEIN: uncharacterized protein LOC1089909861.1e-0445.21Show/hide
Query:  VIQLADKSCIKPLGIVENVLVMVEDLVFPADFYVSDTPNPDY-------------NPSSVDEHQITLTDKSGG
        VIQLAD+S + P G+VE+VLV + DLVFP DFYV D  N D              + + +D H  TLT K  G
Subjt:  VIQLADKSCIKPLGIVENVLVMVEDLVFPADFYVSDTPNPDY-------------NPSSVDEHQITLTDKSGG

A0A2I4EYE8 uncharacterized protein LOC1089938412.3e-0446.03Show/hide
Query:  SKHFTVIQLADKSCIKPLGIVENVLVMVEDLVFPADFYVSDTPNPDYNPSSVDEHQITLTDKS
        +K   VIQLAD+  + P G+VE+VLV + +LVFPADFYV D  N D  P  +      +T K+
Subjt:  SKHFTVIQLADKSCIKPLGIVENVLVMVEDLVFPADFYVSDTPNPDYNPSSVDEHQITLTDKS

A0A371F5D2 Retrovirus-related Pol polyprotein (Fragment)5.6e-0646.55Show/hide
Query:  IQLADKSCIKPLGIVENVLVMVEDLVFPADFYVSDTPNPDYNPSSVDEHQITLTDKSG
        IQLA++S ++PLG++E+VL+ V +L+FPADFYV D  + +++ + +D H  TL+ K G
Subjt:  IQLADKSCIKPLGIVENVLVMVEDLVFPADFYVSDTPNPDYNPSSVDEHQITLTDKSG

A0A371I490 Uncharacterized protein (Fragment)2.1e-0537.63Show/hide
Query:  IQLADKSCIKPLGIVENVLVMVEDLVFPADFYVSDTPNPDYNPSSVDEHQITLTDKSGGVTSVHLLGLGLSTSSDWRYQSDASMFIEKRDSPP
        IQLA++S ++PLGI+E+VLV V +L+FPA+FYV D  +       ++ H  T++ + G  T   ++   L  SS    Q D+ +F +   SPP
Subjt:  IQLADKSCIKPLGIVENVLVMVEDLVFPADFYVSDTPNPDYNPSSVDEHQITLTDKSGGVTSVHLLGLGLSTSSDWRYQSDASMFIEKRDSPP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAGGATCAAAACATTTCACAGTCATTCAACTAGCGGATAAGTCTTGCATTAAACCTCTTGGAATAGTTGAAAACGTTTTAGTTATGGTGGAGGATTTGGTTTTCCC
TGCTGACTTCTATGTTTCAGATACTCCCAATCCTGATTACAATCCATCTTCTGTTGATGAACACCAGATAACCCTTACTGATAAATCTGGTGGAGTCACAAGTGTTCATC
TTCTAGGATTAGGGCTGAGCACATCTTCTGATTGGCGGTACCAAAGCGATGCTTCGATGTTTATAGAGAAGCGTGATTCACCACCCATGAGCATAATATTCAGGGAAGTT
CTATTCTTTCCTTATGCATTGTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCAGGATCAAAACATTTCACAGTCATTCAACTAGCGGATAAGTCTTGCATTAAACCTCTTGGAATAGTTGAAAACGTTTTAGTTATGGTGGAGGATTTGGTTTTCCC
TGCTGACTTCTATGTTTCAGATACTCCCAATCCTGATTACAATCCATCTTCTGTTGATGAACACCAGATAACCCTTACTGATAAATCTGGTGGAGTCACAAGTGTTCATC
TTCTAGGATTAGGGCTGAGCACATCTTCTGATTGGCGGTACCAAAGCGATGCTTCGATGTTTATAGAGAAGCGTGATTCACCACCCATGAGCATAATATTCAGGGAAGTT
CTATTCTTTCCTTATGCATTGTTTTAA
Protein sequenceShow/hide protein sequence
MSGSKHFTVIQLADKSCIKPLGIVENVLVMVEDLVFPADFYVSDTPNPDYNPSSVDEHQITLTDKSGGVTSVHLLGLGLSTSSDWRYQSDASMFIEKRDSPPMSIIFREV
LFFPYALF