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Lag0008324 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0008324
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionZinc finger BED domain-containing protein RICESLEEPER 2-like
Genome locationchr9:17647150..17648997
RNA-Seq ExpressionLag0008324
SyntenyLag0008324
Gene Ontology termsGO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR008906 - HAT, C-terminal dimerisation domain
IPR012337 - Ribonuclease H-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008777637.2 uncharacterized protein LOC103697538 [Phoenix dactylifera]8.8e-1759.21Show/hide
Query:  MLGPNCSGFGWNDRDKCKEAEKHIFDEWVK------GLKNKPFPFFEQLVIVFGKDRANGLGAEGPTVFLEAVEQE
        MLGPN   FGWNDR+KC  A+K ++D WVK      GL+NKPFP++E L IVFGKDR NG GAE PT   E +E+E
Subjt:  MLGPNCSGFGWNDRDKCKEAEKHIFDEWVK------GLKNKPFPFFEQLVIVFGKDRANGLGAEGPTVFLEAVEQE

XP_024029924.1 uncharacterized protein LOC21412682 [Morus notabilis]1.0e-1756.79Show/hide
Query:  MLGPNCSGFGWNDRDKCKEAEKHIFDEWV------KGLKNKPFPFFEQLVIVFGKDRANGLGAEGPTVFLEAVEQEMTDNE
        MLGP  SGFGWND+DKC   EK +FDEWV      KGL+NKPFP++++L +VFGKDRANG GA G T  ++ +++E T+N+
Subjt:  MLGPNCSGFGWNDRDKCKEAEKHIFDEWV------KGLKNKPFPFFEQLVIVFGKDRANGLGAEGPTVFLEAVEQEMTDNE

XP_026662506.2 uncharacterized protein LOC113463064 [Phoenix dactylifera]2.7e-1860.53Show/hide
Query:  MLGPNCSGFGWNDRDKCKEAEKHIFDEWVK------GLKNKPFPFFEQLVIVFGKDRANGLGAEGPTVFLEAVEQE
        MLGPNC  FGWNDRDKC  A+K ++D W+K      GL+NKPFP++E L IVFGKDRANG GAE P    E +E+E
Subjt:  MLGPNCSGFGWNDRDKCKEAEKHIFDEWVK------GLKNKPFPFFEQLVIVFGKDRANGLGAEGPTVFLEAVEQE

XP_038886815.1 uncharacterized protein LOC120077046 [Benincasa hispida]1.2e-1851.55Show/hide
Query:  MLGPNCSGFGWNDRDKCKEAEKHIFDEWV------KGLKNKPFPFFEQLVIVFGKDRANGLGAEGPTVFLEAVEQEMTDNEFWRGDSF---YVPTPP
        MLGPN SGFGWN+R KC    K +FD+WV      KGL+NK FP+ +++ ++FGKDRANGL AEGP    E ++ E T+N  W  D F   YV  PP
Subjt:  MLGPNCSGFGWNDRDKCKEAEKHIFDEWV------KGLKNKPFPFFEQLVIVFGKDRANGLGAEGPTVFLEAVEQEMTDNEFWRGDSF---YVPTPP

XP_038978687.1 uncharacterized protein LOC103695460 [Phoenix dactylifera]3.0e-1759.21Show/hide
Query:  MLGPNCSGFGWNDRDKCKEAEKHIFDEWVK------GLKNKPFPFFEQLVIVFGKDRANGLGAEGPTVFLEAVEQE
        MLGPNCS FGWNDR+KC   +K ++D WVK      GL+NKPFP++E L IVFGKDRANG GAE      E +E+E
Subjt:  MLGPNCSGFGWNDRDKCKEAEKHIFDEWVK------GLKNKPFPFFEQLVIVFGKDRANGLGAEGPTVFLEAVEQE

TrEMBL top hitse value%identityAlignment
A0A5C7HLQ5 Uncharacterized protein4.3e-1748.04Show/hide
Query:  MLGPNCSGFGWNDRDKCKEAEKHIFDEWV------KGLKNKPFPFFEQLVIVFGKDRANGLGAEGPTVFLEAVEQEMTDNEFWRGDSFYVPTPPIVGGDG
        MLGP+ SGFGWND  KC   EK +FDEWV      KGL+NKPFP++E+L  VFGKDRANG G  G   F E VE+   +++    D  + P+  + G   
Subjt:  MLGPNCSGFGWNDRDKCKEAEKHIFDEWV------KGLKNKPFPFFEQLVIVFGKDRANGLGAEGPTVFLEAVEQEMTDNEFWRGDSFYVPTPPIVGGDG

Query:  LS
        +S
Subjt:  LS

A0A6P5ESP3 uncharacterized protein LOC109708977 isoform X24.7e-1651.9Show/hide
Query:  MLGPNCSGFGWNDRDKCKEAEKHIFDEWVK------GLKNKPFPFFEQLVIVFGKDRANGLGAEGPTVFLEAVEQEMTD
        MLGP+ SGFGW+D++KC E +K+++D WVK      GL+ K FP+FE+L IVFGKDRA G+ AE P   +  +E E T+
Subjt:  MLGPNCSGFGWNDRDKCKEAEKHIFDEWVK------GLKNKPFPFFEQLVIVFGKDRANGLGAEGPTVFLEAVEQEMTD

A0A6P5EZC9 uncharacterized protein LOC109708977 isoform X14.7e-1651.9Show/hide
Query:  MLGPNCSGFGWNDRDKCKEAEKHIFDEWVK------GLKNKPFPFFEQLVIVFGKDRANGLGAEGPTVFLEAVEQEMTD
        MLGP+ SGFGW+D++KC E +K+++D WVK      GL+ K FP+FE+L IVFGKDRA G+ AE P   +  +E E T+
Subjt:  MLGPNCSGFGWNDRDKCKEAEKHIFDEWVK------GLKNKPFPFFEQLVIVFGKDRANGLGAEGPTVFLEAVEQEMTD

A0A6P5FXE5 uncharacterized protein LOC109718933 isoform X14.7e-1651.9Show/hide
Query:  MLGPNCSGFGWNDRDKCKEAEKHIFDEWVK------GLKNKPFPFFEQLVIVFGKDRANGLGAEGPTVFLEAVEQEMTD
        MLGP+ SGFGW+D++KC E +K+++D WVK      GL+ K FP+FE+L IVFGKDRA G+ AE P   +  +E E T+
Subjt:  MLGPNCSGFGWNDRDKCKEAEKHIFDEWVK------GLKNKPFPFFEQLVIVFGKDRANGLGAEGPTVFLEAVEQEMTD

A0A6P5G5H8 uncharacterized protein LOC109718933 isoform X24.7e-1651.9Show/hide
Query:  MLGPNCSGFGWNDRDKCKEAEKHIFDEWVK------GLKNKPFPFFEQLVIVFGKDRANGLGAEGPTVFLEAVEQEMTD
        MLGP+ SGFGW+D++KC E +K+++D WVK      GL+ K FP+FE+L IVFGKDRA G+ AE P   +  +E E T+
Subjt:  MLGPNCSGFGWNDRDKCKEAEKHIFDEWVK------GLKNKPFPFFEQLVIVFGKDRANGLGAEGPTVFLEAVEQEMTD

SwissProt top hitse value%identityAlignment
P03010 Putative AC9 transposase8.3e-1053.45Show/hide
Query:  KFKILAKMAKDILAIPLSTVASESAFSTGGRVLDPSHSTLSPTTVETLICLQNWIRSS
        ++ IL ++A+D+LAI +STVASESAFS GGRV+DP  + L    VE LIC ++W+ +S
Subjt:  KFKILAKMAKDILAIPLSTVASESAFSTGGRVLDPSHSTLSPTTVETLICLQNWIRSS

P08770 Putative AC transposase8.3e-1053.45Show/hide
Query:  KFKILAKMAKDILAIPLSTVASESAFSTGGRVLDPSHSTLSPTTVETLICLQNWIRSS
        ++ IL ++A+D+LAI +STVASESAFS GGRV+DP  + L    VE LIC ++W+ +S
Subjt:  KFKILAKMAKDILAIPLSTVASESAFSTGGRVLDPSHSTLSPTTVETLICLQNWIRSS

Q0JMB2 Zinc finger BED domain-containing protein RICESLEEPER 43.3e-0641.79Show/hide
Query:  QTGPKKFKILAKMAKDILAIPLSTVASESAF---STGGRVLDPSHSTLSPTTVETLICLQNWIRSSP
        Q    K+  L++MA+D+LAIP+STV   S+      G R LD   S+L P  VE L+C ++W++ SP
Subjt:  QTGPKKFKILAKMAKDILAIPLSTVASESAF---STGGRVLDPSHSTLSPTTVETLICLQNWIRSSP

Q6AVI0 Zinc finger BED domain-containing protein RICESLEEPER 21.1e-0650Show/hide
Query:  KFKILAKMAKDILAIPLSTVAS-ESAFS--TGGRVLDPSHSTLSPTTVETLICLQNWIRSSP
        KF  L++MA+DILAIP+S V+S  S FS  TG R+LD   S+L P  VE L+C ++W++  P
Subjt:  KFKILAKMAKDILAIPLSTVAS-ESAFS--TGGRVLDPSHSTLSPTTVETLICLQNWIRSSP

Q75HY5 Zinc finger BED domain-containing protein RICESLEEPER 32.3e-0747.62Show/hide
Query:  KFKILAKMAKDILAIPLSTVASE----SAFSTGGRVLDPSHSTLSPTTVETLICLQNWIRSSP
        KF  L+KMA+D+LAIP+S V+S     SA +TG ++LD   S+L P TVE L C ++W++  P
Subjt:  KFKILAKMAKDILAIPLSTVASE----SAFSTGGRVLDPSHSTLSPTTVETLICLQNWIRSSP

Arabidopsis top hitse value%identityAlignment
AT3G42170.1 BED zinc finger ;hAT family dimerisation domain8.8e-0741.94Show/hide
Query:  KFKILAKMAKDILAIPLSTVASESAFSTGGRVLDPSHSTLSPTTVETLICLQNWIRSSPISN
        K+  L+KMA+DIL+IP+S  A +  F    R +D   ++L P TVE LIC + W+  S  S+
Subjt:  KFKILAKMAKDILAIPLSTVASESAFSTGGRVLDPSHSTLSPTTVETLICLQNWIRSSPISN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAGGCCCAAATTGTAGTGGCTTTGGATGGAATGATAGAGACAAGTGCAAAGAAGCAGAAAAACATATATTTGATGAATGGGTGAAGGGACTCAAAAACAAGCCTTT
TCCATTCTTTGAACAATTAGTCATTGTTTTTGGGAAAGATAGGGCCAATGGACTTGGTGCAGAAGGTCCAACTGTTTTTTTGGAAGCAGTGGAACAAGAAATGACCGACA
ATGAATTTTGGAGAGGAGACAGCTTTTATGTGCCTACTCCACCAATAGTTGGGGGGGATGGATTGAGTGTTCGACAAAGAGTTCGAGCTGGCATCTGTAAAACCTTAAAC
CAAACAGGCCCTAAGAAGTTTAAGATTCTTGCTAAGATGGCTAAGGATATTTTGGCAATTCCACTTTCTACTGTAGCTTCAGAATCAGCTTTCTCTACTGGAGGTAGAGT
ACTTGATCCATCTCATAGTACTCTATCTCCAACTACAGTTGAAACACTCATCTGTTTGCAAAATTGGATTCGCTCATCACCTATTAGTAACATTGAGGAGATTATCGAAG
GTGCTCCCGATGAAATAGCGAAGATCGTAGAAGAATCTCAATCGACGAGTAGTGGAATTACCACAATTGATGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGTTAGGCCCAAATTGTAGTGGCTTTGGATGGAATGATAGAGACAAGTGCAAAGAAGCAGAAAAACATATATTTGATGAATGGGTGAAGGGACTCAAAAACAAGCCTTT
TCCATTCTTTGAACAATTAGTCATTGTTTTTGGGAAAGATAGGGCCAATGGACTTGGTGCAGAAGGTCCAACTGTTTTTTTGGAAGCAGTGGAACAAGAAATGACCGACA
ATGAATTTTGGAGAGGAGACAGCTTTTATGTGCCTACTCCACCAATAGTTGGGGGGGATGGATTGAGTGTTCGACAAAGAGTTCGAGCTGGCATCTGTAAAACCTTAAAC
CAAACAGGCCCTAAGAAGTTTAAGATTCTTGCTAAGATGGCTAAGGATATTTTGGCAATTCCACTTTCTACTGTAGCTTCAGAATCAGCTTTCTCTACTGGAGGTAGAGT
ACTTGATCCATCTCATAGTACTCTATCTCCAACTACAGTTGAAACACTCATCTGTTTGCAAAATTGGATTCGCTCATCACCTATTAGTAACATTGAGGAGATTATCGAAG
GTGCTCCCGATGAAATAGCGAAGATCGTAGAAGAATCTCAATCGACGAGTAGTGGAATTACCACAATTGATGAATGA
Protein sequenceShow/hide protein sequence
MLGPNCSGFGWNDRDKCKEAEKHIFDEWVKGLKNKPFPFFEQLVIVFGKDRANGLGAEGPTVFLEAVEQEMTDNEFWRGDSFYVPTPPIVGGDGLSVRQRVRAGICKTLN
QTGPKKFKILAKMAKDILAIPLSTVASESAFSTGGRVLDPSHSTLSPTTVETLICLQNWIRSSPISNIEEIIEGAPDEIAKIVEESQSTSSGITTIDE