; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0008344 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0008344
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionSWIM-type domain-containing protein
Genome locationchr9:18489686..18491369
RNA-Seq ExpressionLag0008344
SyntenyLag0008344
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7840310.1 hypothetical protein G2W53_002608 [Senna tora]5.6e-1232.8Show/hide
Query:  PCQRHLMTAVG---IDGNDGIYPIAWVVVEAETKITLMDVYSYFIKPVNGHPLWPRTTLEPLLPPKIRRPPGRPKRQRRRDVDETAPSHKKQHIQVITKC
        PC  H + A+G   +   D ++P         TK T + VY  ++KP NG  +WP+   +P++PP ++RPPGRPK+QR+++ +ET+  +  +      +C
Subjt:  PCQRHLMTAVG---IDGNDGIYPIAWVVVEAETKITLMDVYSYFIKPVNGHPLWPRTTLEPLLPPKIRRPPGRPKRQRRRDVDETAPSHKKQHIQVITKC

Query:  SRCKCTRHNVRSCRGPIAQRSTKSR
        ++C+   HN R+C+GP ++++  S+
Subjt:  SRCKCTRHNVRSCRGPIAQRSTKSR

KAG5532083.1 hypothetical protein RHGRI_026633 [Rhododendron griersonianum]3.3e-1230.9Show/hide
Query:  IGLDAYHLKGPCQRHLMTAVGIDGNDGIYPIAWVVVEAETK------ITLMDV----------------------------------------YSYFIKP
        IG+D  HLKG     L+TAVG+D N+ +YP+AW VVE E K      +TL+ +                                        Y   I P
Subjt:  IGLDAYHLKGPCQRHLMTAVGIDGNDGIYPIAWVVVEAETK------ITLMDV----------------------------------------YSYFIKP

Query:  VNGHPLWPRTTLEPLLPPKIRRPPGRPKRQRRRDVDETAPSHKKQHIQVI----TKCSRCKCTRHNVRSCRGPIAQRS
        +NGH +WP+T   P++PP+ RR   RPK++R R  +E    +    ++ I      C RC    HN R+C  P+ + S
Subjt:  VNGHPLWPRTTLEPLLPPKIRRPPGRPKRQRRRDVDETAPSHKKQHIQVI----TKCSRCKCTRHNVRSCRGPIAQRS

KAG5566220.1 hypothetical protein RHGRI_001980 [Rhododendron griersonianum]1.9e-1233.33Show/hide
Query:  LDAYHLKGPCQRHLMTAVGIDGNDGIYPIAWVVVEAETKITL------------------------------MDVYSYFIKPVNGHPLWPRTTLEPLLPP
        +DA HLKG     L+ AVGID N+  +P A+ V E+ETK T                                ++Y   I P+NG  +WP +   P+LPP
Subjt:  LDAYHLKGPCQRHLMTAVGIDGNDGIYPIAWVVVEAETKITL------------------------------MDVYSYFIKPVNGHPLWPRTTLEPLLPP

Query:  KIRRPPGRPKRQRRRDVDE----TAPSHKKQHIQVITKCSRCKCTRHNVRSCRGPI
           RP GRPK+ RR++ +E     A   K+Q+  +  +CS+C    HN+RSC+  +
Subjt:  KIRRPPGRPKRQRRRDVDE----TAPSHKKQHIQVITKCSRCKCTRHNVRSCRGPI

RHN71616.1 putative transcription factor interactor and regulator CCHC(Zn) family [Medicago truncatula]5.6e-1248.28Show/hide
Query:  KITLMDVYSYFIKPVNGHPLWPRTTLEPLLPPKIRRPPGRPKRQRRRDVDE--TAPSHKKQHIQVITKCSRCKCTRHNVRSCRGPIA
        K T +D Y  FI P NG  LWP   L P+LPP +RR PGRPK+ RR+D DE  +  S K +  Q   +C+RCK   HN+R+C+G  A
Subjt:  KITLMDVYSYFIKPVNGHPLWPRTTLEPLLPPKIRRPPGRPKRQRRRDVDE--TAPSHKKQHIQVITKCSRCKCTRHNVRSCRGPIA

XP_028112221.1 uncharacterized protein LOC114310445 [Camellia sinensis]3.0e-1336.49Show/hide
Query:  GNDGIYPIAWVVVEAET-----KITLMDVYSYFIKPVNGHPLWPRTTLEPLLPPKIRRPPGRPKRQRRRDVDETAPSHKKQHIQVITKCSRCKCTRHNVR
        G DG Y  +   VE        K T +  Y   I P+NG  LWP+T  +PLLPPK++RP GRP + R RD DE    +K Q  Q   KCS+C C  HN R
Subjt:  GNDGIYPIAWVVVEAET-----KITLMDVYSYFIKPVNGHPLWPRTTLEPLLPPKIRRPPGRPKRQRRRDVDETAPSHKKQHIQVITKCSRCKCTRHNVR

Query:  SCRGPIAQRS---TKSRKDRTFMGLNIPITEFETGTTTEGMMLEDGRK
        +C+ P+  ++   +    + TFMG        E G++   +     RK
Subjt:  SCRGPIAQRS---TKSRKDRTFMGLNIPITEFETGTTTEGMMLEDGRK

TrEMBL top hitse value%identityAlignment
A0A1S3U0L8 uncharacterized protein LOC1067606571.3e-1130.91Show/hide
Query:  CQRHLMTAVGIDGNDGIYPIAWVVVEAE-------TKITLMDVYSYFIKPVNGHPLWPRTTLEPLLPPKIRRPPGRPKRQRRRDVDETAPSHKKQHIQVI
        C  +    VGI     ++ I + +   E        K      Y+  I P+NG  LWPR+  EPLLPP  ++PPGRPK+ RRR+ DE     K     + 
Subjt:  CQRHLMTAVGIDGNDGIYPIAWVVVEAE-------TKITLMDVYSYFIKPVNGHPLWPRTTLEPLLPPKIRRPPGRPKRQRRRDVDETAPSHKKQHIQVI

Query:  TKCSRCKCTRHNVRSCRGPIAQRSTKSRKDRTFMGLNIPITEFETGTTT--EGMMLEDGRKSNES
         KCS C    HNVRSC+   + + T   +     G     +    G+ +   G     GR+++ S
Subjt:  TKCSRCKCTRHNVRSCRGPIAQRSTKSRKDRTFMGLNIPITEFETGTTT--EGMMLEDGRKSNES

A0A396J0S1 Putative transcription factor interactor and regulator CCHC(Zn) family2.7e-1248.28Show/hide
Query:  KITLMDVYSYFIKPVNGHPLWPRTTLEPLLPPKIRRPPGRPKRQRRRDVDE--TAPSHKKQHIQVITKCSRCKCTRHNVRSCRGPIA
        K T +D Y  FI P NG  LWP   L P+LPP +RR PGRPK+ RR+D DE  +  S K +  Q   +C+RCK   HN+R+C+G  A
Subjt:  KITLMDVYSYFIKPVNGHPLWPRTTLEPLLPPKIRRPPGRPKRQRRRDVDE--TAPSHKKQHIQVITKCSRCKCTRHNVRSCRGPIA

A0A444YRR7 CCHC-type domain-containing protein3.5e-1232.78Show/hide
Query:  IGLDAYHLKGPCQRHLMTAVGIDGNDGIYPIAWVVVEAETK------ITLMD-------------------------VYSYFIKPVNGHPLWPRTTLEPL
        IGLD   LKG  +  L++A+G D N+  Y IA+ VV++ETK      +TL+                           Y + I+PVN    W +T     
Subjt:  IGLDAYHLKGPCQRHLMTAVGIDGNDGIYPIAWVVVEAETK------ITLMD-------------------------VYSYFIKPVNGHPLWPRTTLEPL

Query:  LPPKIRRPPGRPKRQRRRDVDETAPSHKKQHIQVITK-----CSRCKCTRHNVRSCRGPIA---QRSTKSRKDRTFMGLN
        +PPK++RP GRP ++RR+D  E   S    +   +TK     CS+C  T HN ++C+GP A   ++ T   K  T +G+N
Subjt:  LPPKIRRPPGRPKRQRRRDVDETAPSHKKQHIQVITK-----CSRCKCTRHNVRSCRGPIA---QRSTKSRKDRTFMGLN

A0A6A2Y251 MULE domain-containing protein8.7e-1140.17Show/hide
Query:  MDVYSYFIKPVNGHPLW-PRTTLEPLLPPKIRRPPGRPKRQRRRDVDETAP-SHKKQHIQVITKCSRCKCTRHNVRSCRG-------PIAQRSTKSRKDR
        MD+YS FI PV G   W P  T+EP+LPP +RRPPGRP + RRR+VDE  P +H+     V   C +C  + HNVR+ +G       P+ Q S   R   
Subjt:  MDVYSYFIKPVNGHPLW-PRTTLEPLLPPKIRRPPGRPKRQRRRDVDETAP-SHKKQHIQVITKCSRCKCTRHNVRSCRG-------PIAQRSTKSRKDR

Query:  TFMGLNIPITEFETGTT
         F   N  + + +T ++
Subjt:  TFMGLNIPITEFETGTT

A0A6P8DW92 uncharacterized protein LOC1162082723.5e-1231.54Show/hide
Query:  PCQRHLMTAVGIDG---NDGIYPIAWVVVEAETKITLMDVYSYFIKPVNGHPLWPRTTLEPLLPPKIRRPPGRPKRQRRRDVDETAPSHKKQHIQVITKC
        PC  H +  +G +     D ++P  W      ++ T   +Y +FIKP  G   W ++  +P+ PPK++RPPGRPK+QR++  +E    +K +       C
Subjt:  PCQRHLMTAVGIDG---NDGIYPIAWVVVEAETKITLMDVYSYFIKPVNGHPLWPRTTLEPLLPPKIRRPPGRPKRQRRRDVDETAPSHKKQHIQVITKC

Query:  SRCKCTRHNVRSCRGP-IAQRSTKSRKDRTFMGLNIPITEFETGTTTEG
         +C  ++HN+R+C+GP IA  S K  K+ +     +PI    T  + +G
Subjt:  SRCKCTRHNVRSCRGP-IAQRSTKSRKDRTFMGLNIPITEFETGTTTEG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAGCGATGAGAGACCAACTTCACCTATTCCAGAATTGGGATGTGCAAGTTGAGATTGAAGGGGAAGTTGAGTCAATTTATGGGTCGGAGGATGTCCTAACTAATCA
ACACAATTCTGATGGTGAGGAGGTGAATGGAGCACTTGAGTTTAGGGTTGAGACTGATATGGATCATATTCGATTTTCCATTGGACTAGATGCATACCACCTAAAGGGGC
CATGCCAAAGACATTTGATGACTGCAGTTGGAATAGATGGTAATGATGGCATATATCCTATTGCATGGGTTGTGGTGGAGGCGGAGACAAAGATAACATTGATGGATGTT
TACTCCTACTTCATCAAACCGGTCAATGGTCACCCTTTATGGCCAAGAACCACATTAGAACCTTTATTACCACCTAAGATCCGAAGGCCTCCTGGTAGACCGAAGAGGCA
GAGAAGAAGAGATGTTGATGAAACTGCACCATCTCATAAGAAGCAACACATTCAGGTCATTACCAAGTGTAGTCGATGTAAATGCACGAGACATAATGTCAGATCTTGTA
GGGGGCCAATAGCACAACGTTCAACAAAGAGTAGAAAAGATAGAACCTTCATGGGATTGAACATTCCTATTACTGAGTTTGAAACTGGAACTACTACTGAGGGAATGATG
CTTGAAGATGGTAGAAAAAGCAATGAAAGTGAAGCATAG
mRNA sequenceShow/hide mRNA sequence
ATGATAGCGATGAGAGACCAACTTCACCTATTCCAGAATTGGGATGTGCAAGTTGAGATTGAAGGGGAAGTTGAGTCAATTTATGGGTCGGAGGATGTCCTAACTAATCA
ACACAATTCTGATGGTGAGGAGGTGAATGGAGCACTTGAGTTTAGGGTTGAGACTGATATGGATCATATTCGATTTTCCATTGGACTAGATGCATACCACCTAAAGGGGC
CATGCCAAAGACATTTGATGACTGCAGTTGGAATAGATGGTAATGATGGCATATATCCTATTGCATGGGTTGTGGTGGAGGCGGAGACAAAGATAACATTGATGGATGTT
TACTCCTACTTCATCAAACCGGTCAATGGTCACCCTTTATGGCCAAGAACCACATTAGAACCTTTATTACCACCTAAGATCCGAAGGCCTCCTGGTAGACCGAAGAGGCA
GAGAAGAAGAGATGTTGATGAAACTGCACCATCTCATAAGAAGCAACACATTCAGGTCATTACCAAGTGTAGTCGATGTAAATGCACGAGACATAATGTCAGATCTTGTA
GGGGGCCAATAGCACAACGTTCAACAAAGAGTAGAAAAGATAGAACCTTCATGGGATTGAACATTCCTATTACTGAGTTTGAAACTGGAACTACTACTGAGGGAATGATG
CTTGAAGATGGTAGAAAAAGCAATGAAAGTGAAGCATAG
Protein sequenceShow/hide protein sequence
MIAMRDQLHLFQNWDVQVEIEGEVESIYGSEDVLTNQHNSDGEEVNGALEFRVETDMDHIRFSIGLDAYHLKGPCQRHLMTAVGIDGNDGIYPIAWVVVEAETKITLMDV
YSYFIKPVNGHPLWPRTTLEPLLPPKIRRPPGRPKRQRRRDVDETAPSHKKQHIQVITKCSRCKCTRHNVRSCRGPIAQRSTKSRKDRTFMGLNIPITEFETGTTTEGMM
LEDGRKSNESEA