| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0043583.1 putative Integrase core domain [Cucumis melo var. makuwa] | 5.8e-20 | 39.36 | Show/hide |
Query: KETRSGYFFNPQENYNLYLTNATFSKEDQMSNHKPQSKL-----------------------------SLIL--DDDIEDSLSFRKKMNDVDKDQWFKAM
KETR G FF+PQEN TNATF +ED M +HKPQ KL +LIL D +ED LS+++ MNDVDKDQW KAM
Subjt: KETRSGYFFNPQENYNLYLTNATFSKEDQMSNHKPQSKL-----------------------------SLIL--DDDIEDSLSFRKKMNDVDKDQWFKAM
Query: DLEMKS--------LISIPSG-------------------------------ILFDTVIRSFGFNQDIDESCIYKKIVSSTVAFFMLY
+LEM+S L+ +P G I FDTVI+S+ F+Q++DE CIYKKI VAF +LY
Subjt: DLEMKS--------LISIPSG-------------------------------ILFDTVIRSFGFNQDIDESCIYKKIVSSTVAFFMLY
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| KAA0046800.1 gag/pol protein [Cucumis melo var. makuwa] | 7.9e-17 | 33.64 | Show/hide |
Query: KETRSGYFFNPQENYNLYLTNATFSKEDQMSNHKPQSKLSL-----------------------------------------------------------
KETR FF+PQEN TNATF +ED M +HKP+SKL L
Subjt: KETRSGYFFNPQENYNLYLTNATFSKEDQMSNHKPQSKLSL-----------------------------------------------------------
Query: -ILDDDIEDSLSFRKKMNDVDKDQWFKAMDLEMKS--------LISIPSG-------------------------------ILFDTVIRSFGFNQDIDES
I DD IED L F++ MNDVDKDQW KAMDLEMKS L+ +P G I FD I+S+GF++++DE
Subjt: -ILDDDIEDSLSFRKKMNDVDKDQWFKAMDLEMKS--------LISIPSG-------------------------------ILFDTVIRSFGFNQDIDES
Query: CIYKKIVSSTVAFFMLY
C+YKKI VAF +LY
Subjt: CIYKKIVSSTVAFFMLY
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| KAA0049915.1 gag/pol protein [Cucumis melo var. makuwa] | 6.7e-16 | 32.72 | Show/hide |
Query: KETRSGYFFNPQENYNLYLTNATFSKEDQMSNHKPQSKLSL-----------------------------------------------------------
KETR G FF+PQEN TNATF +ED M +HKP+SKL L
Subjt: KETRSGYFFNPQENYNLYLTNATFSKEDQMSNHKPQSKLSL-----------------------------------------------------------
Query: -ILDDDIEDSLSFRKKMNDVDKDQWFKAMDLEMKS--------LISIPSG-------------------------------ILFDTVIRSFGFNQDIDES
I DD +ED LS++ MNDVDKDQW K+MDLEM+S L+ +P G I FD I+S+GF+Q++DE
Subjt: -ILDDDIEDSLSFRKKMNDVDKDQWFKAMDLEMKS--------LISIPSG-------------------------------ILFDTVIRSFGFNQDIDES
Query: CIYKKIVSSTVAFFMLY
+YKKI VAF +LY
Subjt: CIYKKIVSSTVAFFMLY
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| KAA0060473.1 retrotransposon protein, putative, Ty1-copia subclass [Cucumis melo var. makuwa] | 6.2e-22 | 38.39 | Show/hide |
Query: PEMDRDWLRLSQFRGGVADCPTVTSKETRSGYFFNPQENYNLYLTNATFSKEDQMSNHKPQSKLSL---------------------ILDDDIEDSLSFR
P+ + RL QF G KETR FF+PQEN TNATF +ED + +HKPQSKL L I DD +EDSLS++
Subjt: PEMDRDWLRLSQFRGGVADCPTVTSKETRSGYFFNPQENYNLYLTNATFSKEDQMSNHKPQSKLSL---------------------ILDDDIEDSLSFR
Query: KKMNDVDKDQWFKAMDLEMK--------SLISIPSGI------------------------LFDTVIRSFGFNQDIDESCIYKKIVSSTVAFFMLYEMQN
+ MNDVDKD+W KAMDLEM+ LI +P G+ FDTV +S+ F+ ++DE CIYKKI + V F M Q
Subjt: KKMNDVDKDQWFKAMDLEMK--------SLISIPSGI------------------------LFDTVIRSFGFNQDIDESCIYKKIVSSTVAFFMLYEMQN
Query: SMKGSRPFRVE
KG PF+ E
Subjt: SMKGSRPFRVE
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| KAA0063836.1 gag/pol protein [Cucumis melo var. makuwa] | 5.5e-18 | 33.65 | Show/hide |
Query: KETRSGYFFNPQENYNLYLTNATFSKEDQMSNHKPQSKLSL------------------------ILDDDIEDSLSFRKKMNDVDKDQWFKAMDLEMKS-
KETR G FF+PQEN TNATF +ED M +HKP+SKL L D+ +ED LS+++ MNDVDKDQW KAMDLEM+S
Subjt: KETRSGYFFNPQENYNLYLTNATFSKEDQMSNHKPQSKLSL------------------------ILDDDIEDSLSFRKKMNDVDKDQWFKAMDLEMKS-
Query: -------LISIPSGI-------------------------------------------------------------LFDTVIRSFGFNQDIDESCIYKKI
L+ +P G+ FDT I+S+GF+Q++DE C+YKKI
Subjt: -------LISIPSGI-------------------------------------------------------------LFDTVIRSFGFNQDIDESCIYKKI
Query: VSSTVAFFMLY
VAF +LY
Subjt: VSSTVAFFMLY
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7TJH9 Putative Integrase core domain | 2.8e-20 | 39.36 | Show/hide |
Query: KETRSGYFFNPQENYNLYLTNATFSKEDQMSNHKPQSKL-----------------------------SLIL--DDDIEDSLSFRKKMNDVDKDQWFKAM
KETR G FF+PQEN TNATF +ED M +HKPQ KL +LIL D +ED LS+++ MNDVDKDQW KAM
Subjt: KETRSGYFFNPQENYNLYLTNATFSKEDQMSNHKPQSKL-----------------------------SLIL--DDDIEDSLSFRKKMNDVDKDQWFKAM
Query: DLEMKS--------LISIPSG-------------------------------ILFDTVIRSFGFNQDIDESCIYKKIVSSTVAFFMLY
+LEM+S L+ +P G I FDTVI+S+ F+Q++DE CIYKKI VAF +LY
Subjt: DLEMKS--------LISIPSG-------------------------------ILFDTVIRSFGFNQDIDESCIYKKIVSSTVAFFMLY
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| A0A5A7TUI8 Gag/pol protein | 3.8e-17 | 33.64 | Show/hide |
Query: KETRSGYFFNPQENYNLYLTNATFSKEDQMSNHKPQSKLSL-----------------------------------------------------------
KETR FF+PQEN TNATF +ED M +HKP+SKL L
Subjt: KETRSGYFFNPQENYNLYLTNATFSKEDQMSNHKPQSKLSL-----------------------------------------------------------
Query: -ILDDDIEDSLSFRKKMNDVDKDQWFKAMDLEMKS--------LISIPSG-------------------------------ILFDTVIRSFGFNQDIDES
I DD IED L F++ MNDVDKDQW KAMDLEMKS L+ +P G I FD I+S+GF++++DE
Subjt: -ILDDDIEDSLSFRKKMNDVDKDQWFKAMDLEMKS--------LISIPSG-------------------------------ILFDTVIRSFGFNQDIDES
Query: CIYKKIVSSTVAFFMLY
C+YKKI VAF +LY
Subjt: CIYKKIVSSTVAFFMLY
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| A0A5A7U8G7 Gag/pol protein | 3.2e-16 | 32.72 | Show/hide |
Query: KETRSGYFFNPQENYNLYLTNATFSKEDQMSNHKPQSKLSL-----------------------------------------------------------
KETR G FF+PQEN TNATF +ED M +HKP+SKL L
Subjt: KETRSGYFFNPQENYNLYLTNATFSKEDQMSNHKPQSKLSL-----------------------------------------------------------
Query: -ILDDDIEDSLSFRKKMNDVDKDQWFKAMDLEMKS--------LISIPSG-------------------------------ILFDTVIRSFGFNQDIDES
I DD +ED LS++ MNDVDKDQW K+MDLEM+S L+ +P G I FD I+S+GF+Q++DE
Subjt: -ILDDDIEDSLSFRKKMNDVDKDQWFKAMDLEMKS--------LISIPSG-------------------------------ILFDTVIRSFGFNQDIDES
Query: CIYKKIVSSTVAFFMLY
+YKKI VAF +LY
Subjt: CIYKKIVSSTVAFFMLY
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| A0A5A7UWW0 Retrotransposon protein, putative, Ty1-copia subclass | 3.0e-22 | 38.39 | Show/hide |
Query: PEMDRDWLRLSQFRGGVADCPTVTSKETRSGYFFNPQENYNLYLTNATFSKEDQMSNHKPQSKLSL---------------------ILDDDIEDSLSFR
P+ + RL QF G KETR FF+PQEN TNATF +ED + +HKPQSKL L I DD +EDSLS++
Subjt: PEMDRDWLRLSQFRGGVADCPTVTSKETRSGYFFNPQENYNLYLTNATFSKEDQMSNHKPQSKLSL---------------------ILDDDIEDSLSFR
Query: KKMNDVDKDQWFKAMDLEMK--------SLISIPSGI------------------------LFDTVIRSFGFNQDIDESCIYKKIVSSTVAFFMLYEMQN
+ MNDVDKD+W KAMDLEM+ LI +P G+ FDTV +S+ F+ ++DE CIYKKI + V F M Q
Subjt: KKMNDVDKDQWFKAMDLEMK--------SLISIPSGI------------------------LFDTVIRSFGFNQDIDESCIYKKIVSSTVAFFMLYEMQN
Query: SMKGSRPFRVE
KG PF+ E
Subjt: SMKGSRPFRVE
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| A0A5A7VBN3 Gag/pol protein | 2.6e-18 | 33.65 | Show/hide |
Query: KETRSGYFFNPQENYNLYLTNATFSKEDQMSNHKPQSKLSL------------------------ILDDDIEDSLSFRKKMNDVDKDQWFKAMDLEMKS-
KETR G FF+PQEN TNATF +ED M +HKP+SKL L D+ +ED LS+++ MNDVDKDQW KAMDLEM+S
Subjt: KETRSGYFFNPQENYNLYLTNATFSKEDQMSNHKPQSKLSL------------------------ILDDDIEDSLSFRKKMNDVDKDQWFKAMDLEMKS-
Query: -------LISIPSGI-------------------------------------------------------------LFDTVIRSFGFNQDIDESCIYKKI
L+ +P G+ FDT I+S+GF+Q++DE C+YKKI
Subjt: -------LISIPSGI-------------------------------------------------------------LFDTVIRSFGFNQDIDESCIYKKI
Query: VSSTVAFFMLY
VAF +LY
Subjt: VSSTVAFFMLY
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