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Lag0008351 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0008351
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionGag/pol protein
Genome locationchr9:18631230..18631772
RNA-Seq ExpressionLag0008351
SyntenyLag0008351
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044955.1 gag/pol protein [Cucumis melo var. makuwa]1.3e-4057.89Show/hide
Query:  SYQLHHDALKNVFNARMQEGHPVREHVLDMMDQFNIAEVNGGVVCERSQVAFILHSLPPSYMSLRTNACMNKIQFDLTTLLNELQIYESMLKRKGKNVVK
        SYQ+ HDALK ++NARM EG  VREHVL+MM  FN+AE+NG V+ E SQV+FIL SLP S++  R+NA MNKI + LTTLLNELQ +ES++K KG+   K
Subjt:  SYQLHHDALKNVFNARMQEGHPVREHVLDMMDQFNIAEVNGGVVCERSQVAFILHSLPPSYMSLRTNACMNKIQFDLTTLLNELQIYESMLKRKGKNVVK

Query:  GEPDVAHSKKKFLKGSSSGTKSVPQASSSKQIQKRKGDKG-KAPAQAVQGKGKAKVVADKGRCFHCNVDGH
        GE +VA S +KF +GS+SGTKS+P +S +K+ +K+KG +G KA   A +   KAK  A KG CFHCN +GH
Subjt:  GEPDVAHSKKKFLKGSSSGTKSVPQASSSKQIQKRKGDKG-KAPAQAVQGKGKAKVVADKGRCFHCNVDGH

KAA0048404.1 gag/pol protein [Cucumis melo var. makuwa]1.3e-4057.89Show/hide
Query:  SYQLHHDALKNVFNARMQEGHPVREHVLDMMDQFNIAEVNGGVVCERSQVAFILHSLPPSYMSLRTNACMNKIQFDLTTLLNELQIYESMLKRKGKNVVK
        SYQ+ HDALK ++NARM EG  VREHVL+MM  FN+AE+NG V+ E SQV+FIL SLP S++  R+NA MNKI + LTTLLNELQ +ES++K KG+   K
Subjt:  SYQLHHDALKNVFNARMQEGHPVREHVLDMMDQFNIAEVNGGVVCERSQVAFILHSLPPSYMSLRTNACMNKIQFDLTTLLNELQIYESMLKRKGKNVVK

Query:  GEPDVAHSKKKFLKGSSSGTKSVPQASSSKQIQKRKGDKG-KAPAQAVQGKGKAKVVADKGRCFHCNVDGH
        GE +VA S +KF +GS+SGTKS+P +S +K+ +K+KG +G KA   A +   KAK  A KG CFHCN +GH
Subjt:  GEPDVAHSKKKFLKGSSSGTKSVPQASSSKQIQKRKGDKG-KAPAQAVQGKGKAKVVADKGRCFHCNVDGH

KAA0051952.1 gag/pol protein [Cucumis melo var. makuwa]1.3e-4057.89Show/hide
Query:  SYQLHHDALKNVFNARMQEGHPVREHVLDMMDQFNIAEVNGGVVCERSQVAFILHSLPPSYMSLRTNACMNKIQFDLTTLLNELQIYESMLKRKGKNVVK
        SYQ+ HDALK ++NARM EG  VREHVL+MM  FN+AE+NG V+ E SQV+FIL SLP S++  R+NA MNKI + LTTLLNELQ +ES++K KG+   K
Subjt:  SYQLHHDALKNVFNARMQEGHPVREHVLDMMDQFNIAEVNGGVVCERSQVAFILHSLPPSYMSLRTNACMNKIQFDLTTLLNELQIYESMLKRKGKNVVK

Query:  GEPDVAHSKKKFLKGSSSGTKSVPQASSSKQIQKRKGDKG-KAPAQAVQGKGKAKVVADKGRCFHCNVDGH
        GE +VA S +KF +GS+SGTKS+P +S +K+ +K+KG +G KA   A +   KAK  A KG CFHCN +GH
Subjt:  GEPDVAHSKKKFLKGSSSGTKSVPQASSSKQIQKRKGDKG-KAPAQAVQGKGKAKVVADKGRCFHCNVDGH

KAA0054490.1 gag/pol protein [Cucumis melo var. makuwa]1.3e-4057.89Show/hide
Query:  SYQLHHDALKNVFNARMQEGHPVREHVLDMMDQFNIAEVNGGVVCERSQVAFILHSLPPSYMSLRTNACMNKIQFDLTTLLNELQIYESMLKRKGKNVVK
        SYQ+ HDALK ++NARM EG  VREHVL+MM  FN+AE+NG V+ E SQV+FIL SLP S++  R+NA MNKI + LTTLLNELQ +ES++K KG+   K
Subjt:  SYQLHHDALKNVFNARMQEGHPVREHVLDMMDQFNIAEVNGGVVCERSQVAFILHSLPPSYMSLRTNACMNKIQFDLTTLLNELQIYESMLKRKGKNVVK

Query:  GEPDVAHSKKKFLKGSSSGTKSVPQASSSKQIQKRKGDKG-KAPAQAVQGKGKAKVVADKGRCFHCNVDGH
        GE +VA S +KF +GS+SGTKS+P +S +K+ +K+KG +G KA   A +   KAK  A KG CFHCN +GH
Subjt:  GEPDVAHSKKKFLKGSSSGTKSVPQASSSKQIQKRKGDKG-KAPAQAVQGKGKAKVVADKGRCFHCNVDGH

TYK14550.1 gag/pol protein [Cucumis melo var. makuwa]1.3e-4056.47Show/hide
Query:  SYQLHHDALKNVFNARMQEGHPVREHVLDMMDQFNIAEVNGGVVCERSQVAFILHSLPPSYMSLRTNACMNKIQFDLTTLLNELQIYESMLKRKGKNVVK
        SYQ+ HDALK ++NARM EG  VREHVL+MM  FN+AE+NG V+ E SQV+FIL SLP S++  R+NA MNKI + LTTLLNELQ +ES++K KG+   K
Subjt:  SYQLHHDALKNVFNARMQEGHPVREHVLDMMDQFNIAEVNGGVVCERSQVAFILHSLPPSYMSLRTNACMNKIQFDLTTLLNELQIYESMLKRKGKNVVK

Query:  GEPDVAHSKKKFLKGSSSGTKSVPQASSSKQIQKRKGDKGKAPAQAVQGKGKAKVVADKGRCFHCNVDGH
        GE +VA S +KF +GS+SGTKS+P +S +K+ +K+KG +G   A     K   K  A KG CFHCN +GH
Subjt:  GEPDVAHSKKKFLKGSSSGTKSVPQASSSKQIQKRKGDKGKAPAQAVQGKGKAKVVADKGRCFHCNVDGH

TrEMBL top hitse value%identityAlignment
A0A5A7SMH8 Gag/pol protein6.3e-4157.89Show/hide
Query:  SYQLHHDALKNVFNARMQEGHPVREHVLDMMDQFNIAEVNGGVVCERSQVAFILHSLPPSYMSLRTNACMNKIQFDLTTLLNELQIYESMLKRKGKNVVK
        SYQ+ HDALK ++NARM EG  VREHVL+MM  FN+AE+NG V+ E SQV+FIL SLP S++  R+NA MNKI + LTTLLNELQ +ES++K KG+   K
Subjt:  SYQLHHDALKNVFNARMQEGHPVREHVLDMMDQFNIAEVNGGVVCERSQVAFILHSLPPSYMSLRTNACMNKIQFDLTTLLNELQIYESMLKRKGKNVVK

Query:  GEPDVAHSKKKFLKGSSSGTKSVPQASSSKQIQKRKGDKG-KAPAQAVQGKGKAKVVADKGRCFHCNVDGH
        GE +VA S +KF +GS+SGTKS+P +S +K+ +K+KG +G KA   A +   KAK  A KG CFHCN +GH
Subjt:  GEPDVAHSKKKFLKGSSSGTKSVPQASSSKQIQKRKGDKG-KAPAQAVQGKGKAKVVADKGRCFHCNVDGH

A0A5A7TU93 Gag/pol protein6.3e-4157.89Show/hide
Query:  SYQLHHDALKNVFNARMQEGHPVREHVLDMMDQFNIAEVNGGVVCERSQVAFILHSLPPSYMSLRTNACMNKIQFDLTTLLNELQIYESMLKRKGKNVVK
        SYQ+ HDALK ++NARM EG  VREHVL+MM  FN+AE+NG V+ E SQV+FIL SLP S++  R+NA MNKI + LTTLLNELQ +ES++K KG+   K
Subjt:  SYQLHHDALKNVFNARMQEGHPVREHVLDMMDQFNIAEVNGGVVCERSQVAFILHSLPPSYMSLRTNACMNKIQFDLTTLLNELQIYESMLKRKGKNVVK

Query:  GEPDVAHSKKKFLKGSSSGTKSVPQASSSKQIQKRKGDKG-KAPAQAVQGKGKAKVVADKGRCFHCNVDGH
        GE +VA S +KF +GS+SGTKS+P +S +K+ +K+KG +G KA   A +   KAK  A KG CFHCN +GH
Subjt:  GEPDVAHSKKKFLKGSSSGTKSVPQASSSKQIQKRKGDKG-KAPAQAVQGKGKAKVVADKGRCFHCNVDGH

A0A5A7TWB9 Gag/pol protein6.3e-4157.89Show/hide
Query:  SYQLHHDALKNVFNARMQEGHPVREHVLDMMDQFNIAEVNGGVVCERSQVAFILHSLPPSYMSLRTNACMNKIQFDLTTLLNELQIYESMLKRKGKNVVK
        SYQ+ HDALK ++NARM EG  VREHVL+MM  FN+AE+NG V+ E SQV+FIL SLP S++  R+NA MNKI + LTTLLNELQ +ES++K KG+   K
Subjt:  SYQLHHDALKNVFNARMQEGHPVREHVLDMMDQFNIAEVNGGVVCERSQVAFILHSLPPSYMSLRTNACMNKIQFDLTTLLNELQIYESMLKRKGKNVVK

Query:  GEPDVAHSKKKFLKGSSSGTKSVPQASSSKQIQKRKGDKG-KAPAQAVQGKGKAKVVADKGRCFHCNVDGH
        GE +VA S +KF +GS+SGTKS+P +S +K+ +K+KG +G KA   A +   KAK  A KG CFHCN +GH
Subjt:  GEPDVAHSKKKFLKGSSSGTKSVPQASSSKQIQKRKGDKG-KAPAQAVQGKGKAKVVADKGRCFHCNVDGH

A0A5A7V4M1 Gag/pol protein6.3e-4157.89Show/hide
Query:  SYQLHHDALKNVFNARMQEGHPVREHVLDMMDQFNIAEVNGGVVCERSQVAFILHSLPPSYMSLRTNACMNKIQFDLTTLLNELQIYESMLKRKGKNVVK
        SYQ+ HDALK ++NARM EG  VREHVL+MM  FN+AE+NG V+ E SQV+FIL SLP S++  R+NA MNKI + LTTLLNELQ +ES++K KG+   K
Subjt:  SYQLHHDALKNVFNARMQEGHPVREHVLDMMDQFNIAEVNGGVVCERSQVAFILHSLPPSYMSLRTNACMNKIQFDLTTLLNELQIYESMLKRKGKNVVK

Query:  GEPDVAHSKKKFLKGSSSGTKSVPQASSSKQIQKRKGDKG-KAPAQAVQGKGKAKVVADKGRCFHCNVDGH
        GE +VA S +KF +GS+SGTKS+P +S +K+ +K+KG +G KA   A +   KAK  A KG CFHCN +GH
Subjt:  GEPDVAHSKKKFLKGSSSGTKSVPQASSSKQIQKRKGDKG-KAPAQAVQGKGKAKVVADKGRCFHCNVDGH

A0A5D3CPJ6 Gag/pol protein6.3e-4156.47Show/hide
Query:  SYQLHHDALKNVFNARMQEGHPVREHVLDMMDQFNIAEVNGGVVCERSQVAFILHSLPPSYMSLRTNACMNKIQFDLTTLLNELQIYESMLKRKGKNVVK
        SYQ+ HDALK ++NARM EG  VREHVL+MM  FN+AE+NG V+ E SQV+FIL SLP S++  R+NA MNKI + LTTLLNELQ +ES++K KG+   K
Subjt:  SYQLHHDALKNVFNARMQEGHPVREHVLDMMDQFNIAEVNGGVVCERSQVAFILHSLPPSYMSLRTNACMNKIQFDLTTLLNELQIYESMLKRKGKNVVK

Query:  GEPDVAHSKKKFLKGSSSGTKSVPQASSSKQIQKRKGDKGKAPAQAVQGKGKAKVVADKGRCFHCNVDGH
        GE +VA S +KF +GS+SGTKS+P +S +K+ +K+KG +G   A     K   K  A KG CFHCN +GH
Subjt:  GEPDVAHSKKKFLKGSSSGTKSVPQASSSKQIQKRKGDKGKAPAQAVQGKGKAKVVADKGRCFHCNVDGH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCCAAGGAAAGTCTCGGGTTTACACGTCCTATCAACTCCACCACGACGCCTTGAAGAATGTCTTCAATGCCAGAATGCAAGAGGGACATCCTGTTCGAGAGCATGT
CCTGGATATGATGGACCAGTTTAATATTGCCGAGGTGAATGGCGGGGTAGTCTGCGAGCGCAGTCAGGTTGCGTTCATTCTTCATTCGCTTCCTCCTAGCTACATGTCGC
TTAGGACAAATGCATGCATGAACAAAATACAGTTCGACCTGACCACCCTCCTGAACGAGTTACAAATTTACGAGTCCATGCTGAAAAGAAAGGGCAAAAATGTGGTTAAA
GGAGAGCCAGATGTGGCCCATTCCAAGAAAAAGTTCCTGAAGGGTTCATCCTCAGGAACAAAATCTGTACCTCAGGCTTCTTCATCGAAACAAATTCAAAAAAGGAAGGG
TGACAAGGGGAAGGCTCCTGCGCAAGCTGTGCAAGGTAAAGGAAAGGCCAAGGTCGTGGCCGACAAGGGCAGATGCTTCCACTGCAATGTGGATGGTCACTAA
mRNA sequenceShow/hide mRNA sequence
ATGATCCAAGGAAAGTCTCGGGTTTACACGTCCTATCAACTCCACCACGACGCCTTGAAGAATGTCTTCAATGCCAGAATGCAAGAGGGACATCCTGTTCGAGAGCATGT
CCTGGATATGATGGACCAGTTTAATATTGCCGAGGTGAATGGCGGGGTAGTCTGCGAGCGCAGTCAGGTTGCGTTCATTCTTCATTCGCTTCCTCCTAGCTACATGTCGC
TTAGGACAAATGCATGCATGAACAAAATACAGTTCGACCTGACCACCCTCCTGAACGAGTTACAAATTTACGAGTCCATGCTGAAAAGAAAGGGCAAAAATGTGGTTAAA
GGAGAGCCAGATGTGGCCCATTCCAAGAAAAAGTTCCTGAAGGGTTCATCCTCAGGAACAAAATCTGTACCTCAGGCTTCTTCATCGAAACAAATTCAAAAAAGGAAGGG
TGACAAGGGGAAGGCTCCTGCGCAAGCTGTGCAAGGTAAAGGAAAGGCCAAGGTCGTGGCCGACAAGGGCAGATGCTTCCACTGCAATGTGGATGGTCACTAA
Protein sequenceShow/hide protein sequence
MIQGKSRVYTSYQLHHDALKNVFNARMQEGHPVREHVLDMMDQFNIAEVNGGVVCERSQVAFILHSLPPSYMSLRTNACMNKIQFDLTTLLNELQIYESMLKRKGKNVVK
GEPDVAHSKKKFLKGSSSGTKSVPQASSSKQIQKRKGDKGKAPAQAVQGKGKAKVVADKGRCFHCNVDGH