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Lag0008364 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0008364
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr9:19093461..19102964
RNA-Seq ExpressionLag0008364
SyntenyLag0008364
Gene Ontology termsNA
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PIN21706.1 DNA-directed DNA polymerase [Handroanthus impetiginosus]1.9e-3932.33Show/hide
Query:  MMKQFLEKFFQASRAGNIRKEIYGISQITRETLYEYWERFKCLRASFPHHQIPDQLLIQYFYEGLLPMDRSMVDAASGGALVNKTPVEARQLISSMAENS
        M++ FL KFF ASRA NIRKEI G+ Q   ETL+EYWERFK L  S P H I DQLLIQYFYEGLLPM+R M+DAASGGA+VNKTP EAR LIS MA NS
Subjt:  MMKQFLEKFFQASRAGNIRKEIYGISQITRETLYEYWERFKCLRASFPHHQIPDQLLIQYFYEGLLPMDRSMVDAASGGALVNKTPVEARQLISSMAENS

Query:  QQFG--------------------TRGPTVLFKPPQRARTDAGESLWALLYTRNTTKACPEIKEGG--DVNAVGGFSG----------------------
        QQFG                        T LF+     +T   ++      T + T  CP ++E      NAVGGF G                      
Subjt:  QQFG--------------------TRGPTVLFKPPQRARTDAGESLWALLYTRNTTKACPEIKEGG--DVNAVGGFSG----------------------

Query:  --------------------------------------NQRRVKVNVPLLEAILKIPTYLEFLKTWYEGKEKSSGKEEVS--ENVD--------------
                                                R+V+VN+PLL+AI +IP Y +FLK     K+K  G E +S  ENV               
Subjt:  --------------------------------------NQRRVKVNVPLLEAILKIPTYLEFLKTWYEGKEKSSGKEEVS--ENVD--------------

Query:  -----------------------------------------------VQIANRK------------------------YTSN--SDHHPSSTTILLGRPF
                                                       +Q+A+R                         Y  N   D+ P+ST ILLG+PF
Subjt:  -----------------------------------------------VQIANRK------------------------YTSN--SDHHPSSTTILLGRPF

Query:  MKTAKTVIDVDEGVVLVGFQDKTLDLIFYD
        ++T++T IDV +G + + F  + +    YD
Subjt:  MKTAKTVIDVDEGVVLVGFQDKTLDLIFYD

XP_019180076.1 PREDICTED: uncharacterized protein LOC109175288 [Ipomoea nil]7.3e-3953.33Show/hide
Query:  KQFLEKFFQASRAGNIRKEIYGISQITRETLYEYWERFKCLRASFPHHQIPDQLLIQYFYEGLLPMDRSMVDAASGGALVNKTPVEARQLISSMAENSQQ
        K FLEKFF ASRA NIRKEIYGI Q T ETLYEYWERFK L +S PHHQI DQ LIQYFYEGLLP DRSMVDAASGG+L +KTP +ARQLIS+MAENSQQ
Subjt:  KQFLEKFFQASRAGNIRKEIYGISQITRETLYEYWERFKCLRASFPHHQIPDQLLIQYFYEGLLPMDRSMVDAASGGALVNKTPVEARQLISSMAENSQQ

Query:  FGTR---------------------GPTVLFKPPQRARTDAGESLWALLYTRNTTKACPEIKE-GGDVNAVGGFSGNQRR
        +GTR                       T L +     +  +  +     +  + T  CP ++    ++NA+GGF G   R
Subjt:  FGTR---------------------GPTVLFKPPQRARTDAGESLWALLYTRNTTKACPEIKE-GGDVNAVGGFSGNQRR

XP_019183625.1 PREDICTED: uncharacterized protein LOC109178444 [Ipomoea nil]1.1e-3953.33Show/hide
Query:  KQFLEKFFQASRAGNIRKEIYGISQITRETLYEYWERFKCLRASFPHHQIPDQLLIQYFYEGLLPMDRSMVDAASGGALVNKTPVEARQLISSMAENSQQ
        K FLEKFF ASRA NIRKEIYGI Q T ETLYEYWERFK L +S PHHQI DQ LIQYFYEGLLP DRSMVDAASGG+L +KTP +ARQLIS+MAENS Q
Subjt:  KQFLEKFFQASRAGNIRKEIYGISQITRETLYEYWERFKCLRASFPHHQIPDQLLIQYFYEGLLPMDRSMVDAASGGALVNKTPVEARQLISSMAENSQQ

Query:  FGTRGP---------------------TVLFKPPQRARTDAGESLWALLYTRNTTKACPEIKE-GGDVNAVGGFSGNQRR
        +GTR                       T L +     +  +  +    L+ ++ T  CP ++    ++NA+GGF G   R
Subjt:  FGTRGP---------------------TVLFKPPQRARTDAGESLWALLYTRNTTKACPEIKE-GGDVNAVGGFSGNQRR

XP_027066460.1 uncharacterized protein LOC113692270 [Coffea arabica]2.3e-4054.1Show/hide
Query:  MMKQFLEKFFQASRAGNIRKEIYGISQITRETLYEYWERFKCLRASFPHHQIPDQLLIQYFYEGLLPMDRSMVDAASGGALVNKTPVEARQLISSMAENS
        + +QFLEKFF ASRA NIRKEI G+ Q   ETLYEYW+RFK L AS PHHQIPDQLLIQYFYEGL PMDRSMVDAASGGALVNKTP EA+ LIS++AENS
Subjt:  MMKQFLEKFFQASRAGNIRKEIYGISQITRETLYEYWERFKCLRASFPHHQIPDQLLIQYFYEGLLPMDRSMVDAASGGALVNKTPVEARQLISSMAENS

Query:  QQFGTRGP---------------------TVLFKPPQRARTDAGESLWALLYTRNTTKACPEIKEG--GDVNAVGGFSGNQRR
        QQFGTR                       T L +     +    ++        +TT  CP ++E      NA+GG SG   R
Subjt:  QQFGTRGP---------------------TVLFKPPQRARTDAGESLWALLYTRNTTKACPEIKEG--GDVNAVGGFSGNQRR

XP_027166445.1 uncharacterized protein LOC113766451 [Coffea eugenioides]2.3e-4054.1Show/hide
Query:  MMKQFLEKFFQASRAGNIRKEIYGISQITRETLYEYWERFKCLRASFPHHQIPDQLLIQYFYEGLLPMDRSMVDAASGGALVNKTPVEARQLISSMAENS
        + +QFLEKFF ASRA NIRKEI G+ Q   ETLYEYW+RFK L AS PHHQIPDQLLIQYFYEGL PMDRSMVDAASGGALVNKTP EA+ LIS++AENS
Subjt:  MMKQFLEKFFQASRAGNIRKEIYGISQITRETLYEYWERFKCLRASFPHHQIPDQLLIQYFYEGLLPMDRSMVDAASGGALVNKTPVEARQLISSMAENS

Query:  QQFGTRGP---------------------TVLFKPPQRARTDAGESLWALLYTRNTTKACPEIKEG--GDVNAVGGFSGNQRR
        QQFGTR                       T L +     +    ++        +TT  CP ++E      NA+GG SG   R
Subjt:  QQFGTRGP---------------------TVLFKPPQRARTDAGESLWALLYTRNTTKACPEIKEG--GDVNAVGGFSGNQRR

TrEMBL top hitse value%identityAlignment
A0A2G9HW16 DNA-directed DNA polymerase9.3e-4032.33Show/hide
Query:  MMKQFLEKFFQASRAGNIRKEIYGISQITRETLYEYWERFKCLRASFPHHQIPDQLLIQYFYEGLLPMDRSMVDAASGGALVNKTPVEARQLISSMAENS
        M++ FL KFF ASRA NIRKEI G+ Q   ETL+EYWERFK L  S P H I DQLLIQYFYEGLLPM+R M+DAASGGA+VNKTP EAR LIS MA NS
Subjt:  MMKQFLEKFFQASRAGNIRKEIYGISQITRETLYEYWERFKCLRASFPHHQIPDQLLIQYFYEGLLPMDRSMVDAASGGALVNKTPVEARQLISSMAENS

Query:  QQFG--------------------TRGPTVLFKPPQRARTDAGESLWALLYTRNTTKACPEIKEGG--DVNAVGGFSG----------------------
        QQFG                        T LF+     +T   ++      T + T  CP ++E      NAVGGF G                      
Subjt:  QQFG--------------------TRGPTVLFKPPQRARTDAGESLWALLYTRNTTKACPEIKEGG--DVNAVGGFSG----------------------

Query:  --------------------------------------NQRRVKVNVPLLEAILKIPTYLEFLKTWYEGKEKSSGKEEVS--ENVD--------------
                                                R+V+VN+PLL+AI +IP Y +FLK     K+K  G E +S  ENV               
Subjt:  --------------------------------------NQRRVKVNVPLLEAILKIPTYLEFLKTWYEGKEKSSGKEEVS--ENVD--------------

Query:  -----------------------------------------------VQIANRK------------------------YTSN--SDHHPSSTTILLGRPF
                                                       +Q+A+R                         Y  N   D+ P+ST ILLG+PF
Subjt:  -----------------------------------------------VQIANRK------------------------YTSN--SDHHPSSTTILLGRPF

Query:  MKTAKTVIDVDEGVVLVGFQDKTLDLIFYD
        ++T++T IDV +G + + F  + +    YD
Subjt:  MKTAKTVIDVDEGVVLVGFQDKTLDLIFYD

A0A6N2NBX1 Uncharacterized protein6.7e-3854.1Show/hide
Query:  MMKQFLEKFFQASRAGNIRKEIYGISQITRETLYEYWERFKCLRASFPHHQIPDQLLIQYFYEGLLPMDRSMVDAASGGALVNKTPVEARQLISSMAENS
        + K+FLEKFF ASRAG IRKEI GI Q   ETLYEYWERF  L AS PHHQI DQLL+QYFYEGLL MDRSM+DAASGGALV KTP  AR LIS MA NS
Subjt:  MMKQFLEKFFQASRAGNIRKEIYGISQITRETLYEYWERFKCLRASFPHHQIPDQLLIQYFYEGLLPMDRSMVDAASGGALVNKTPVEARQLISSMAENS

Query:  QQFGTRGPTVLFKPPQRARTDAGESLWAL---------------------LYTRNTTKACPEIKEG--GDVNAVGGFSGNQRR
        QQFG RG     K  + + ++    L  L                      ++ ++T  CP+++E     VNAV GF GNQ+R
Subjt:  QQFGTRGPTVLFKPPQRARTDAGESLWAL---------------------LYTRNTTKACPEIKEG--GDVNAVGGFSGNQRR

A0A6P6SJY7 uncharacterized protein LOC1136922701.1e-4054.1Show/hide
Query:  MMKQFLEKFFQASRAGNIRKEIYGISQITRETLYEYWERFKCLRASFPHHQIPDQLLIQYFYEGLLPMDRSMVDAASGGALVNKTPVEARQLISSMAENS
        + +QFLEKFF ASRA NIRKEI G+ Q   ETLYEYW+RFK L AS PHHQIPDQLLIQYFYEGL PMDRSMVDAASGGALVNKTP EA+ LIS++AENS
Subjt:  MMKQFLEKFFQASRAGNIRKEIYGISQITRETLYEYWERFKCLRASFPHHQIPDQLLIQYFYEGLLPMDRSMVDAASGGALVNKTPVEARQLISSMAENS

Query:  QQFGTRGP---------------------TVLFKPPQRARTDAGESLWALLYTRNTTKACPEIKEG--GDVNAVGGFSGNQRR
        QQFGTR                       T L +     +    ++        +TT  CP ++E      NA+GG SG   R
Subjt:  QQFGTRGP---------------------TVLFKPPQRARTDAGESLWALLYTRNTTKACPEIKEG--GDVNAVGGFSGNQRR

A0A6P6WVI1 uncharacterized protein LOC1137359021.8e-3854.19Show/hide
Query:  MMKQFLEKFFQASRAGNIRKEIYGISQITRETLYEYWERFKCLRASFPHHQIPDQLLIQYFYEGLLPMDRSMVDAASGGALVNKTPVEARQLISSMAENS
        + +QFLEKFF ASRA NIRKEI GI Q   ETL EYWERFK L AS PHHQIPDQLLIQYFYEGLLPM+RSMVDAASG  LVNKTP EA+ LIS+MAENS
Subjt:  MMKQFLEKFFQASRAGNIRKEIYGISQITRETLYEYWERFKCLRASFPHHQIPDQLLIQYFYEGLLPMDRSMVDAASGGALVNKTPVEARQLISSMAENS

Query:  QQFGTRGP---------------------TVLFKPPQRARTDAGESLWALLYTRNTTKACPEIKEG--GDVNAVGGFSG
        QQFGTR                       T L +     +    ++        + T  CP ++E      NA+GG SG
Subjt:  QQFGTRGP---------------------TVLFKPPQRARTDAGESLWALLYTRNTTKACPEIKEG--GDVNAVGGFSG

A0A6P6WZ36 uncharacterized protein LOC1137375806.7e-3851.91Show/hide
Query:  MMKQFLEKFFQASRAGNIRKEIYGISQITRETLYEYWERFKCLRASFPHHQIPDQLLIQYFYEGLLPMDRSMVDAASGGALVNKTPVEARQLISSMAENS
        + ++FLEKFF  SRA NIRKEI G+ Q   ETLYEYW+RFK L AS PHHQI DQLLIQYFYE L PMDRSMVDAASGGALVNKTP EA+ LIS++AENS
Subjt:  MMKQFLEKFFQASRAGNIRKEIYGISQITRETLYEYWERFKCLRASFPHHQIPDQLLIQYFYEGLLPMDRSMVDAASGGALVNKTPVEARQLISSMAENS

Query:  QQFGTRGP---------------------TVLFKPPQRARTDAGESLWALLYTRNTTKACPEIKEG--GDVNAVGGFSGNQRR
        QQFGTR                       T L +     +    ++        +TT  CP ++E      NA+GG SG   R
Subjt:  QQFGTRGP---------------------TVLFKPPQRARTDAGESLWALLYTRNTTKACPEIKEG--GDVNAVGGFSGNQRR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGAAGCAATTTCTAGAGAAGTTCTTCCAAGCAAGTAGAGCTGGCAACATTAGAAAAGAGATTTATGGCATTTCGCAGATCACTAGGGAGACACTCTATGAGTATTG
GGAGAGATTCAAGTGCTTACGTGCCAGTTTCCCACATCATCAGATTCCAGATCAACTTTTGATCCAATATTTTTATGAGGGACTGCTACCTATGGATCGGAGTATGGTAG
ACGCTGCCAGTGGAGGAGCACTCGTGAACAAGACGCCAGTTGAGGCAAGACAGTTGATTTCAAGTATGGCTGAGAATTCTCAACAGTTTGGGACAAGAGGACCTACCGTG
CTATTCAAGCCGCCACAAAGAGCTAGGACAGATGCAGGCGAAAGCTTGTGGGCTCTGCTCTATACTAGAAATACTACCAAGGCCTGCCCCGAGATCAAAGAAGGTGGAGA
TGTGAATGCTGTTGGTGGATTCAGTGGAAACCAAAGGAGAGTTAAGGTGAACGTCCCATTACTTGAGGCAATTTTAAAAATCCCAACTTACCTCGAGTTCCTCAAGACTT
GGTATGAAGGTAAGGAGAAATCCTCAGGTAAAGAAGAGGTTAGTGAGAACGTTGATGTGCAAATTGCTAACCGCAAGTACACCTCTAATTCTGATCACCATCCATCTTCT
ACGACGATACTTCTTGGTCGTCCTTTTATGAAGACTGCCAAGACAGTTATTGATGTAGACGAGGGAGTTGTATTAGTAGGTTTCCAGGATAAGACCTTGGACTTAATTTT
TTATGATACCGAAAATCCTCATGCATCTTCTATTGAGTACTACATGGTTCAACCCGACCCAGTGAATGGTCGTGAGTTATACGATGTAGTTGACGAGCACCAGGTTGGGG
GTGGGGGATTCTGCTTTGTATTTCTGTTGGGCCTTGAGCATCTGTGCGTCAGGCCAACGTTTGTGCTTAATTCGTCGGTGATCACCGGAAAAGTGATTGGAAAGTCGACG
TCGGTCACCGGAAAAGTGACCGGAAAGTCGATGCCGGTCGCCGAAAAAGTTGTTGGTGGTCGTCGGATAAGTCATCGGCCGGTTGTCGATACTTTGAGCATAGGTGATGT
CGGGAGCCAATCGCACAAATTGGTGTTATTTCGAGCCAATTATGGAGTTTTGGAGTCATCTCGGTGTTCTTGGACGACGAGAAGAAAACGCAGCAACTCCAAGAATCCTT
CGCTAGAATTTTCTTCTCCAAAACACACTACCAATGAGGTTACACCGGAGCAAAGTTGTCGATTTTGGGGAAAAAGTGCCCAAAATGAAGCCATTCAAGCCCAAATTCCA
AGCTTGGATCAAAAGGGGAGTCAAAGAGATCAATCATGGGAAAAAGACCCAAAAGAAATGAAGTGGAAGCCCAAAAGGAAGCCCAAAACGCAGCAGAAATGTCGCGACGC
TGTCCATTTTTTGGGCACCAAGCCGATGATGTCACAACGTTGCGACGCTGTGCCAATTAGCGTCGTGACGCTACCCCCTTTTCAGGCCTATAAAAGGCGCCCCTTGGTGC
CTCATTTCACCATCAATCACTCACCAATTCTTCCATTCTTTCCTTTCTTTGGCTCCTTTGGAGCCTCTCTCATGGCTTTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGATGAAGCAATTTCTAGAGAAGTTCTTCCAAGCAAGTAGAGCTGGCAACATTAGAAAAGAGATTTATGGCATTTCGCAGATCACTAGGGAGACACTCTATGAGTATTG
GGAGAGATTCAAGTGCTTACGTGCCAGTTTCCCACATCATCAGATTCCAGATCAACTTTTGATCCAATATTTTTATGAGGGACTGCTACCTATGGATCGGAGTATGGTAG
ACGCTGCCAGTGGAGGAGCACTCGTGAACAAGACGCCAGTTGAGGCAAGACAGTTGATTTCAAGTATGGCTGAGAATTCTCAACAGTTTGGGACAAGAGGACCTACCGTG
CTATTCAAGCCGCCACAAAGAGCTAGGACAGATGCAGGCGAAAGCTTGTGGGCTCTGCTCTATACTAGAAATACTACCAAGGCCTGCCCCGAGATCAAAGAAGGTGGAGA
TGTGAATGCTGTTGGTGGATTCAGTGGAAACCAAAGGAGAGTTAAGGTGAACGTCCCATTACTTGAGGCAATTTTAAAAATCCCAACTTACCTCGAGTTCCTCAAGACTT
GGTATGAAGGTAAGGAGAAATCCTCAGGTAAAGAAGAGGTTAGTGAGAACGTTGATGTGCAAATTGCTAACCGCAAGTACACCTCTAATTCTGATCACCATCCATCTTCT
ACGACGATACTTCTTGGTCGTCCTTTTATGAAGACTGCCAAGACAGTTATTGATGTAGACGAGGGAGTTGTATTAGTAGGTTTCCAGGATAAGACCTTGGACTTAATTTT
TTATGATACCGAAAATCCTCATGCATCTTCTATTGAGTACTACATGGTTCAACCCGACCCAGTGAATGGTCGTGAGTTATACGATGTAGTTGACGAGCACCAGGTTGGGG
GTGGGGGATTCTGCTTTGTATTTCTGTTGGGCCTTGAGCATCTGTGCGTCAGGCCAACGTTTGTGCTTAATTCGTCGGTGATCACCGGAAAAGTGATTGGAAAGTCGACG
TCGGTCACCGGAAAAGTGACCGGAAAGTCGATGCCGGTCGCCGAAAAAGTTGTTGGTGGTCGTCGGATAAGTCATCGGCCGGTTGTCGATACTTTGAGCATAGGTGATGT
CGGGAGCCAATCGCACAAATTGGTGTTATTTCGAGCCAATTATGGAGTTTTGGAGTCATCTCGGTGTTCTTGGACGACGAGAAGAAAACGCAGCAACTCCAAGAATCCTT
CGCTAGAATTTTCTTCTCCAAAACACACTACCAATGAGGTTACACCGGAGCAAAGTTGTCGATTTTGGGGAAAAAGTGCCCAAAATGAAGCCATTCAAGCCCAAATTCCA
AGCTTGGATCAAAAGGGGAGTCAAAGAGATCAATCATGGGAAAAAGACCCAAAAGAAATGAAGTGGAAGCCCAAAAGGAAGCCCAAAACGCAGCAGAAATGTCGCGACGC
TGTCCATTTTTTGGGCACCAAGCCGATGATGTCACAACGTTGCGACGCTGTGCCAATTAGCGTCGTGACGCTACCCCCTTTTCAGGCCTATAAAAGGCGCCCCTTGGTGC
CTCATTTCACCATCAATCACTCACCAATTCTTCCATTCTTTCCTTTCTTTGGCTCCTTTGGAGCCTCTCTCATGGCTTTCTAG
Protein sequenceShow/hide protein sequence
MMKQFLEKFFQASRAGNIRKEIYGISQITRETLYEYWERFKCLRASFPHHQIPDQLLIQYFYEGLLPMDRSMVDAASGGALVNKTPVEARQLISSMAENSQQFGTRGPTV
LFKPPQRARTDAGESLWALLYTRNTTKACPEIKEGGDVNAVGGFSGNQRRVKVNVPLLEAILKIPTYLEFLKTWYEGKEKSSGKEEVSENVDVQIANRKYTSNSDHHPSS
TTILLGRPFMKTAKTVIDVDEGVVLVGFQDKTLDLIFYDTENPHASSIEYYMVQPDPVNGRELYDVVDEHQVGGGGFCFVFLLGLEHLCVRPTFVLNSSVITGKVIGKST
SVTGKVTGKSMPVAEKVVGGRRISHRPVVDTLSIGDVGSQSHKLVLFRANYGVLESSRCSWTTRRKRSNSKNPSLEFSSPKHTTNEVTPEQSCRFWGKSAQNEAIQAQIP
SLDQKGSQRDQSWEKDPKEMKWKPKRKPKTQQKCRDAVHFLGTKPMMSQRCDAVPISVVTLPPFQAYKRRPLVPHFTINHSPILPFFPFFGSFGASLMAF