| GenBank top hits | e value | %identity | Alignment |
|---|
| ADJ18449.1 gag/pol protein, partial [Bryonia dioica] | 2.3e-209 | 55.3 | Show/hide |
Query: MSSSIISLLKNEQLTGENFPQWKSNLNTILVVEDLRFVLTEECPPVPPRTAAQAVKDAYERWTKANEK-------------------------------E
M++SI+ LL +E+L G+N+ WKSNLNTILVV+DLRFVLTEECP P A + V++AY+RW KAN+K E
Subjt: MSSSIISLLKNEQLTGENFPQWKSNLNTILVVEDLRFVLTEECPPVPPRTAAQAVKDAYERWTKANEK-------------------------------E
Query: MFGLPSYQLHHDALKNVFNAKMLEGQSVREHVLDMINQFNIAEANGGVVCERSQAS--------------------------------------------
MFG PS+ L H+A+K+++ +M EG SVREHVLDM+ FNIAE NGG + E +Q S
Subjt: MFGLPSYQLHHDALKNVFNAKMLEGQSVREHVLDMINQFNIAEANGGVVCERSQAS--------------------------------------------
Query: ----SSKQIQKRKGDKGKAPAQAV---------QGKGKA------KVVADKGRCFHCNADGHWKRNCPRYLAEKRRGK--EGKFDLLVLETCLVEHDEFA
++ + KRK +G + V +GKGKA K ADKG+CFHCN DGHWKRNCP+YLAEK+ K +GK+DLLV+ETCLVE D
Subjt: ----SSKQIQKRKGDKGKAPAQAV---------QGKGKA------KVVADKGRCFHCNADGHWKRNCPRYLAEKRRGK--EGKFDLLVLETCLVEHDEFA
Query: WILDSGATNHVCSSFQ-GNDFQQLADGEMTLKVGTGDVVSARAVGAAKLFFRN-----------------------------------------------
WILDSGATNH+C SFQ + +++L +GE+TLKVGTG+VVSA AVG LFF++
Subjt: WILDSGATNHVCSSFQ-GNDFQQLADGEMTLKVGTGDVVSARAVGAAKLFFRN-----------------------------------------------
Query: ------------KPTDAKAILSHEMFKTAETQNKRQKVSPLSNNTYLWHLRLGHINIDRIDRLVKNGLLTGIEDTSLPPCESCLEGKMTKRPFTGKGYRA
+PT A +L+ EMF+T ETQNK+QKV S+N YLWHLRLGHIN++RI+RLVK+G+L +ED SLPPCESCLEGKMTKR FTGKG RA
Subjt: ------------KPTDAKAILSHEMFKTAETQNKRQKVSPLSNNTYLWHLRLGHINIDRIDRLVKNGLLTGIEDTSLPPCESCLEGKMTKRPFTGKGYRA
Query: KEPLELIHSDLCGPMNVKARCGYEYFISFIDDYSRYGYLYLMGHKSEALEKFQEFKAEVENLLGKTIKTLRSDRGGEYLDQRFQDYMIEHGIQSQLSAPG
K PLEL+HSDLCGPMNVKAR GYEYFISFIDD+SRYG++YL+ HKSE+ EKF+E+KAEVEN +GKTIKTLRSDRGGEY+D +FQDY+IE GIQSQLSAP
Subjt: KEPLELIHSDLCGPMNVKARCGYEYFISFIDDYSRYGYLYLMGHKSEALEKFQEFKAEVENLLGKTIKTLRSDRGGEYLDQRFQDYMIEHGIQSQLSAPG
Query: TPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVATAVHILNNVPSKSVSETPFELWKGRQPSLRYFRIWGCPAHVLVTNPKKLEPRTRICQFVVYP
TPQQNGVSERRNRTLLDMVRSMMSYAQLP SFWGYA+ TA+HILNNVPSKSV ETP+ELWKGR+ SLRYFRIWGCPAHVLV NPKKLEPR+++C FV YP
Subjt: TPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVATAVHILNNVPSKSVSETPFELWKGRQPSLRYFRIWGCPAHVLVTNPKKLEPRTRICQFVVYP
Query: KETRGGL
KE+RGGL
Subjt: KETRGGL
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| KAA0025945.1 gag/pol protein [Cucumis melo var. makuwa] | 5.7e-224 | 66.24 | Show/hide |
Query: MSSSIISLLKNEQLTGENFPQWKSNLNTILVVEDLRFVLTEECPPVPPRTAAQAVKDAYERWTKANEKEMFGLPSYQLHHDALKNVFNAK---MLEGQSV
MSSSII+LLK +QLTGEN+ WKS LN ILV+ DL FVL EECPP P + A+Q+V+DAY+RWTKAN+K + + ++ ++ + K M+ + +
Subjt: MSSSIISLLKNEQLTGENFPQWKSNLNTILVVEDLRFVLTEECPPVPPRTAAQAVKDAYERWTKANEKEMFGLPSYQLHHDALKNVFNAK---MLEGQSV
Query: REHVLDMINQFNI---AEANGGVVCER--SQASSSKQIQKRKGDKGKAPAQAVQGKGKAKVVADKGRCFHCNADGHWKRNCPRYLAEKRRGKEGKFDLLV
+ + +M Q +I EAN R S S++IQKRK KGK P AV+ KGKAK VA K +CFHCN D HWK NCP+YL +K+ KEGK+DLLV
Subjt: REHVLDMINQFNI---AEANGGVVCER--SQASSSKQIQKRKGDKGKAPAQAVQGKGKAKVVADKGRCFHCNADGHWKRNCPRYLAEKRRGKEGKFDLLV
Query: LETCLVEHDEFAWILDSGATNHVCSSFQ-GNDFQQLADGEMTLKVGTGDVVSARAVGAAKLFFRNK----------------------------------
LETCLVE+D+ AWILDSGATNHVCSS Q + F+QL D EMTLKVGTGDV+SARAVG AKLFF NK
Subjt: LETCLVEHDEFAWILDSGATNHVCSSFQ-GNDFQQLADGEMTLKVGTGDVVSARAVGAAKLFFRNK----------------------------------
Query: -------------------------PTDAKAILSHEMFKTAETQNKRQKVSPLSNNTYLWHLRLGHINIDRIDRLVKNGLLTGIEDTSLPPCESCLEGKM
P +AKA+L+HEMF+TA TQNKRQ++SP +NNTYLWHLRLGHIN+DRI RLVKNGLL ++D SLPPCESCLEGKM
Subjt: -------------------------PTDAKAILSHEMFKTAETQNKRQKVSPLSNNTYLWHLRLGHINIDRIDRLVKNGLLTGIEDTSLPPCESCLEGKM
Query: TKRPFTGKGYRAKEPLELIHSDLCGPMNVKARCGYEYFISFIDDYSRYGYLYLMGHKSEALEKFQEFKAEVENLLGKTIKTLRSDRGGEYLDQRFQDYMI
TKRPFTGKGYRAKEPLELIHSDLCGPMNVKAR G+EYFISFIDDYSRYGYLYLM HKSEALEKF+E+K EVENLL K IK LRSDRGGEY+D RFQDYMI
Subjt: TKRPFTGKGYRAKEPLELIHSDLCGPMNVKARCGYEYFISFIDDYSRYGYLYLMGHKSEALEKFQEFKAEVENLLGKTIKTLRSDRGGEYLDQRFQDYMI
Query: EHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVATAVHILNNVPSKSVSETPFELWKGRQPSLRYFRIWGCPAHVLVTNPKKLE
EHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAV TAVHILNNVPSKSVSETPFELW+GR+PSL +FRIWGCPAHVLVTNPKKLE
Subjt: EHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVATAVHILNNVPSKSVSETPFELWKGRQPSLRYFRIWGCPAHVLVTNPKKLE
Query: PRTRICQFVVYPKETRGGL
PR+R+CQFV YPKETRGGL
Subjt: PRTRICQFVVYPKETRGGL
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| KAA0035907.1 gag/pol protein [Cucumis melo var. makuwa] | 3.9e-220 | 65.43 | Show/hide |
Query: MSSSIISLLKNEQLTGENFPQWKSNLNTILVVEDLRFVLTEECPPVPPRTAAQAVKDAYERWTKANEKEMFGLPSYQLHHDALKNVFNAK---MLEGQSV
MSSSII+LLK +QLTGEN+ WKS LNTILV+ DL FVL EECP P + A+Q+V+DAY+RWTKAN+K + + ++ ++ + K M+ + +
Subjt: MSSSIISLLKNEQLTGENFPQWKSNLNTILVVEDLRFVLTEECPPVPPRTAAQAVKDAYERWTKANEKEMFGLPSYQLHHDALKNVFNAK---MLEGQSV
Query: REHVLDMINQFNI---AEANGGVVCER--SQASSSKQIQKRKGDKGKAPAQAVQGKGKAKVVADKGRCFHCNADGHWKRNCPRYLAEKRRGKEGKFDLLV
+ + +M Q +I EAN R S S++IQKRK KGK P AV+ KGKAK VA K +CFHCN D HWK NCP+YL +K KE K+DLLV
Subjt: REHVLDMINQFNI---AEANGGVVCER--SQASSSKQIQKRKGDKGKAPAQAVQGKGKAKVVADKGRCFHCNADGHWKRNCPRYLAEKRRGKEGKFDLLV
Query: LETCLVEHDEFAWILDSGATNHVCSSFQ-GNDFQQLADGEMTLKVGTGDVVSARAVGAAKLFFRNK----------------------------------
LETCLVE+D+ AWILDSGATNHVCSS Q + F+QL D EMTLKVGTGDV+SARAVG AKLFF NK
Subjt: LETCLVEHDEFAWILDSGATNHVCSSFQ-GNDFQQLADGEMTLKVGTGDVVSARAVGAAKLFFRNK----------------------------------
Query: -------------------------PTDAKAILSHEMFKTAETQNKRQKVSPLSNNTYLWHLRLGHINIDRIDRLVKNGLLTGIEDTSLPPCESCLEGKM
P +AKA+L+HEMF+TA TQNKRQ++SP +NNTYLWHLRLGHIN+DRI RLVK+GLL ++D SLPPCESCLEGKM
Subjt: -------------------------PTDAKAILSHEMFKTAETQNKRQKVSPLSNNTYLWHLRLGHINIDRIDRLVKNGLLTGIEDTSLPPCESCLEGKM
Query: TKRPFTGKGYRAKEPLELIHSDLCGPMNVKARCGYEYFISFIDDYSRYGYLYLMGHKSEALEKFQEFKAEVENLLGKTIKTLRSDRGGEYLDQRFQDYMI
TKRPFTGKGYRAKEPLELIHSDLCGPMNVKAR +EYFISFIDDYSRYGYLYLM HKSEALEKF+E+K EVENLL K IK RSDRGGEY+D FQDYMI
Subjt: TKRPFTGKGYRAKEPLELIHSDLCGPMNVKARCGYEYFISFIDDYSRYGYLYLMGHKSEALEKFQEFKAEVENLLGKTIKTLRSDRGGEYLDQRFQDYMI
Query: EHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVATAVHILNNVPSKSVSETPFELWKGRQPSLRYFRIWGCPAHVLVTNPKKLE
EHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAV TAVHILNNVPSKSVSETPFELW+GR+PSL +FRIWGCPAHVLVTNPKKLE
Subjt: EHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVATAVHILNNVPSKSVSETPFELWKGRQPSLRYFRIWGCPAHVLVTNPKKLE
Query: PRTRICQFVVYPKETRGGL
PR+R+CQFV YPKETRGGL
Subjt: PRTRICQFVVYPKETRGGL
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| KAA0060534.1 gag/pol protein [Cucumis melo var. makuwa] | 8.6e-204 | 63.56 | Show/hide |
Query: ILVVEDLRFVLTEECPPVPPRTAAQAVKDAYERWTKANEKEMFGLPSYQLHHDALKNVFNAK---MLEGQSVREHVLDMINQ--FNIAEANGGVVCERSQ
ILV+ DLRFVL EECPP P + A+Q+V+DAY+RWTKANEK + + ++ ++ + K M+ + + + + +M Q I + +R
Subjt: ILVVEDLRFVLTEECPPVPPRTAAQAVKDAYERWTKANEKEMFGLPSYQLHHDALKNVFNAK---MLEGQSVREHVLDMINQ--FNIAEANGGVVCERSQ
Query: ASS--SKQIQKRKGDKGKAPAQAVQGKGKAKVVADKGRCFHCNADGHWKRNCPRYLAEKRRGKEGKFDLLVLETCLVEHDEFAWILDSGATNHVCSSFQ-
SS S++IQKRK KGK P A++GKGK KVV K + FHCN + HWK NCP+YL +K+ KEGK+DLLVLETCLVE+D+ AWILDSGATNHVCSS Q
Subjt: ASS--SKQIQKRKGDKGKAPAQAVQGKGKAKVVADKGRCFHCNADGHWKRNCPRYLAEKRRGKEGKFDLLVLETCLVEHDEFAWILDSGATNHVCSSFQ-
Query: GNDFQQLADGEMTLKVGTGDVVSARAVGAAKLFFRN-----------------------------------------------------------KPTDA
+ F+QL + EM LKVGTGDV+SARAVG AKLFF N KP +
Subjt: GNDFQQLADGEMTLKVGTGDVVSARAVGAAKLFFRN-----------------------------------------------------------KPTDA
Query: KAILSHEMFKTAETQNKRQKVSPLSNNTYLWHLRLGHINIDRIDRLVKNGLLTGIEDTSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNV
KA+L+HEMF+TA TQNKRQ++S +NNTYLWHLRLGHIN+DRI RLVKNGLL +ED SLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNV
Subjt: KAILSHEMFKTAETQNKRQKVSPLSNNTYLWHLRLGHINIDRIDRLVKNGLLTGIEDTSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNV
Query: KARCGYEYFISFIDDYSRYGYLYLMGHKSEALEKFQEFKAEVENLLGKTIKTLRSDRGGEYLDQRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLD
KA G+EYFISFIDDYS YGYLYL+ HKSEALEKF+E+K EVENLL K IK LRSDRGGEY+D RFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLD
Subjt: KARCGYEYFISFIDDYSRYGYLYLMGHKSEALEKFQEFKAEVENLLGKTIKTLRSDRGGEYLDQRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLD
Query: MVRSMMSYAQLPSSFWGYAVATAVHILNNVPSKSVSETPFELWKGRQPSLRYFRIWGCPAHVLVTNPKKLEPRTRICQFVVYPKETRGGL
MV SMMSY QLPSSFWGYAV TAVHILNNVPSK+V ETPFELW+GR+PSL +FRIW CP HVLVTNPKKLEPR+R+CQFV YPKETRGGL
Subjt: MVRSMMSYAQLPSSFWGYAVATAVHILNNVPSKSVSETPFELWKGRQPSLRYFRIWGCPAHVLVTNPKKLEPRTRICQFVVYPKETRGGL
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| TYK14550.1 gag/pol protein [Cucumis melo var. makuwa] | 2.8e-202 | 53.3 | Show/hide |
Query: MSSSIISLLKNEQLTGENFPQWKSNLNTILVVEDLRFVLTEECPPVPPRTAAQAVKDAYERWTKANEK-------------------------------E
M+S+ +++L ++L G N+ WK+ +NT+L+++DLRFVL EECP VP A + V++ YERW KANEK E
Subjt: MSSSIISLLKNEQLTGENFPQWKSNLNTILVVEDLRFVLTEECPPVPPRTAAQAVKDAYERWTKANEK-------------------------------E
Query: MFGLPSYQLHHDALKNVFNAKMLEGQSVREHVLDMINQFNIAEANGGVVCERSQAS----------------------------------SSKQIQKRKG
MFG SYQ+ HDALK ++NA+M EG SVREHVL+M+ FN+AE NG V+ E SQ S + + + K KG
Subjt: MFGLPSYQLHHDALKNVFNAKMLEGQSVREHVLDMINQFNIAEANGGVVCERSQAS----------------------------------SSKQIQKRKG
Query: DKGKA--------------------------------------PAQAVQGKGKAKVVADKGRCFHCNADGHWKRNCPRYLAEKRRGKEGKFDLLVLETCL
KG+A A K K A KG CFHCN +GHWKRNCP+YLAEK++ K+GK+DLLVLETCL
Subjt: DKGKA--------------------------------------PAQAVQGKGKAKVVADKGRCFHCNADGHWKRNCPRYLAEKRRGKEGKFDLLVLETCL
Query: VEHDEFAWILDSGATNHVCSSFQG-NDFQQLADGEMTLKVGTGDVVSARAVGAAKL-------------------------------------------F
VE+D+ AWI+DSGATNHVCSSFQG + ++QL GEMT++VGTG VVSA AVG +L
Subjt: VEHDEFAWILDSGATNHVCSSFQG-NDFQQLADGEMTLKVGTGDVVSARAVGAAKL-------------------------------------------F
Query: FRN----------------KPTDAKAILSHEMFKTAETQNKRQKVSPLSNNTYLWHLRLGHINIDRIDRLVKNGLLTGIEDTSLPPCESCLEGKMTKRPF
++N + +KA+L+ EMFKTA TQNKR K+SP N +LWHLRLGHIN++RI+RLVKNGLL+ +E+ SLP CESCLEGKMTKRPF
Subjt: FRN----------------KPTDAKAILSHEMFKTAETQNKRQKVSPLSNNTYLWHLRLGHINIDRIDRLVKNGLLTGIEDTSLPPCESCLEGKMTKRPF
Query: TGKGYRAKEPLELIHSDLCGPMNVKARCGYEYFISFIDDYSRYGYLYLMGHKSEALEKFQEFKAEVENLLGKTIKTLRSDRGGEYLDQRFQDYMIEHGIQ
TGKG+RAKEPLEL+HSDLCGPMNVKAR G+EYFI+F DDYSRYGY+YLM HKSEALEKF+E+KAEVEN L KTIKT RSDRGGEY+D +FQ+Y++E GI
Subjt: TGKGYRAKEPLELIHSDLCGPMNVKARCGYEYFISFIDDYSRYGYLYLMGHKSEALEKFQEFKAEVENLLGKTIKTLRSDRGGEYLDQRFQDYMIEHGIQ
Query: SQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVATAVHILNNVPSKSVSETPFELWKGRQPSLRYFRIWGCPAHVLVTNPKKLEPRTRI
SQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYA LP+SFWGYAV TAV+ILN VPSKSVSETP +LW GR+ SLR+FRIWGCPAHVL NPKKLEPR+++
Subjt: SQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVATAVHILNNVPSKSVSETPFELWKGRQPSLRYFRIWGCPAHVLVTNPKKLEPRTRI
Query: CQFVVYPKETRGG
C FV YPK TRGG
Subjt: CQFVVYPKETRGG
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SMH8 Gag/pol protein | 1.3e-202 | 53.3 | Show/hide |
Query: MSSSIISLLKNEQLTGENFPQWKSNLNTILVVEDLRFVLTEECPPVPPRTAAQAVKDAYERWTKANEK-------------------------------E
M+S+ +++L ++L G N+ WK+ +NT+L+++DLRFVL EECP VP A + V++ YERW KANEK E
Subjt: MSSSIISLLKNEQLTGENFPQWKSNLNTILVVEDLRFVLTEECPPVPPRTAAQAVKDAYERWTKANEK-------------------------------E
Query: MFGLPSYQLHHDALKNVFNAKMLEGQSVREHVLDMINQFNIAEANGGVVCERSQAS----------------------------------SSKQIQKRKG
MFG SYQ+ HDALK ++NA+M EG SVREHVL+M+ FN+AE NG V+ E SQ S + + + K KG
Subjt: MFGLPSYQLHHDALKNVFNAKMLEGQSVREHVLDMINQFNIAEANGGVVCERSQAS----------------------------------SSKQIQKRKG
Query: DKGKA--------------------------------------PAQAVQGKGKAKVVADKGRCFHCNADGHWKRNCPRYLAEKRRGKEGKFDLLVLETCL
KG+A A K K A KG CFHCN +GHWKRNCP+YLAEK++ K+GK+DLLVLETCL
Subjt: DKGKA--------------------------------------PAQAVQGKGKAKVVADKGRCFHCNADGHWKRNCPRYLAEKRRGKEGKFDLLVLETCL
Query: VEHDEFAWILDSGATNHVCSSFQG-NDFQQLADGEMTLKVGTGDVVSARAVGAAKL-------------------------------------------F
VE+D+ AWI+DSGATNHVCSSFQG + ++QL GEMT++VGTG VVSA AVG +L
Subjt: VEHDEFAWILDSGATNHVCSSFQG-NDFQQLADGEMTLKVGTGDVVSARAVGAAKL-------------------------------------------F
Query: FRN----------------KPTDAKAILSHEMFKTAETQNKRQKVSPLSNNTYLWHLRLGHINIDRIDRLVKNGLLTGIEDTSLPPCESCLEGKMTKRPF
++N + +KA+L+ EMFKTA TQNKR K+SP N +LWHLRLGHIN++RI+RLVKNGLL+ +E+ SLP CESCLEGKMTKRPF
Subjt: FRN----------------KPTDAKAILSHEMFKTAETQNKRQKVSPLSNNTYLWHLRLGHINIDRIDRLVKNGLLTGIEDTSLPPCESCLEGKMTKRPF
Query: TGKGYRAKEPLELIHSDLCGPMNVKARCGYEYFISFIDDYSRYGYLYLMGHKSEALEKFQEFKAEVENLLGKTIKTLRSDRGGEYLDQRFQDYMIEHGIQ
TGKG+RAKEPLEL+HSDLCGPMNVKAR G+EYFI+F DDYSRYGY+YLM HKSEALEKF+E+KAEVEN L KTIKT RSDRGGEY+D +FQ+Y++E GI
Subjt: TGKGYRAKEPLELIHSDLCGPMNVKARCGYEYFISFIDDYSRYGYLYLMGHKSEALEKFQEFKAEVENLLGKTIKTLRSDRGGEYLDQRFQDYMIEHGIQ
Query: SQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVATAVHILNNVPSKSVSETPFELWKGRQPSLRYFRIWGCPAHVLVTNPKKLEPRTRI
SQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYA LP+SFWGYAV TAV+ILN VPSKSVSETP +LW GR+ SLR+FRIWGCPAHVL NPKKLEPR+++
Subjt: SQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVATAVHILNNVPSKSVSETPFELWKGRQPSLRYFRIWGCPAHVLVTNPKKLEPRTRI
Query: CQFVVYPKETRGG
C FV YPK TRGG
Subjt: CQFVVYPKETRGG
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| A0A5A7T2V9 Gag/pol protein | 1.9e-220 | 65.43 | Show/hide |
Query: MSSSIISLLKNEQLTGENFPQWKSNLNTILVVEDLRFVLTEECPPVPPRTAAQAVKDAYERWTKANEKEMFGLPSYQLHHDALKNVFNAK---MLEGQSV
MSSSII+LLK +QLTGEN+ WKS LNTILV+ DL FVL EECP P + A+Q+V+DAY+RWTKAN+K + + ++ ++ + K M+ + +
Subjt: MSSSIISLLKNEQLTGENFPQWKSNLNTILVVEDLRFVLTEECPPVPPRTAAQAVKDAYERWTKANEKEMFGLPSYQLHHDALKNVFNAK---MLEGQSV
Query: REHVLDMINQFNI---AEANGGVVCER--SQASSSKQIQKRKGDKGKAPAQAVQGKGKAKVVADKGRCFHCNADGHWKRNCPRYLAEKRRGKEGKFDLLV
+ + +M Q +I EAN R S S++IQKRK KGK P AV+ KGKAK VA K +CFHCN D HWK NCP+YL +K KE K+DLLV
Subjt: REHVLDMINQFNI---AEANGGVVCER--SQASSSKQIQKRKGDKGKAPAQAVQGKGKAKVVADKGRCFHCNADGHWKRNCPRYLAEKRRGKEGKFDLLV
Query: LETCLVEHDEFAWILDSGATNHVCSSFQ-GNDFQQLADGEMTLKVGTGDVVSARAVGAAKLFFRNK----------------------------------
LETCLVE+D+ AWILDSGATNHVCSS Q + F+QL D EMTLKVGTGDV+SARAVG AKLFF NK
Subjt: LETCLVEHDEFAWILDSGATNHVCSSFQ-GNDFQQLADGEMTLKVGTGDVVSARAVGAAKLFFRNK----------------------------------
Query: -------------------------PTDAKAILSHEMFKTAETQNKRQKVSPLSNNTYLWHLRLGHINIDRIDRLVKNGLLTGIEDTSLPPCESCLEGKM
P +AKA+L+HEMF+TA TQNKRQ++SP +NNTYLWHLRLGHIN+DRI RLVK+GLL ++D SLPPCESCLEGKM
Subjt: -------------------------PTDAKAILSHEMFKTAETQNKRQKVSPLSNNTYLWHLRLGHINIDRIDRLVKNGLLTGIEDTSLPPCESCLEGKM
Query: TKRPFTGKGYRAKEPLELIHSDLCGPMNVKARCGYEYFISFIDDYSRYGYLYLMGHKSEALEKFQEFKAEVENLLGKTIKTLRSDRGGEYLDQRFQDYMI
TKRPFTGKGYRAKEPLELIHSDLCGPMNVKAR +EYFISFIDDYSRYGYLYLM HKSEALEKF+E+K EVENLL K IK RSDRGGEY+D FQDYMI
Subjt: TKRPFTGKGYRAKEPLELIHSDLCGPMNVKARCGYEYFISFIDDYSRYGYLYLMGHKSEALEKFQEFKAEVENLLGKTIKTLRSDRGGEYLDQRFQDYMI
Query: EHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVATAVHILNNVPSKSVSETPFELWKGRQPSLRYFRIWGCPAHVLVTNPKKLE
EHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAV TAVHILNNVPSKSVSETPFELW+GR+PSL +FRIWGCPAHVLVTNPKKLE
Subjt: EHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVATAVHILNNVPSKSVSETPFELWKGRQPSLRYFRIWGCPAHVLVTNPKKLE
Query: PRTRICQFVVYPKETRGGL
PR+R+CQFV YPKETRGGL
Subjt: PRTRICQFVVYPKETRGGL
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| A0A5A7TZD0 Gag/pol protein | 2.8e-224 | 66.24 | Show/hide |
Query: MSSSIISLLKNEQLTGENFPQWKSNLNTILVVEDLRFVLTEECPPVPPRTAAQAVKDAYERWTKANEKEMFGLPSYQLHHDALKNVFNAK---MLEGQSV
MSSSII+LLK +QLTGEN+ WKS LN ILV+ DL FVL EECPP P + A+Q+V+DAY+RWTKAN+K + + ++ ++ + K M+ + +
Subjt: MSSSIISLLKNEQLTGENFPQWKSNLNTILVVEDLRFVLTEECPPVPPRTAAQAVKDAYERWTKANEKEMFGLPSYQLHHDALKNVFNAK---MLEGQSV
Query: REHVLDMINQFNI---AEANGGVVCER--SQASSSKQIQKRKGDKGKAPAQAVQGKGKAKVVADKGRCFHCNADGHWKRNCPRYLAEKRRGKEGKFDLLV
+ + +M Q +I EAN R S S++IQKRK KGK P AV+ KGKAK VA K +CFHCN D HWK NCP+YL +K+ KEGK+DLLV
Subjt: REHVLDMINQFNI---AEANGGVVCER--SQASSSKQIQKRKGDKGKAPAQAVQGKGKAKVVADKGRCFHCNADGHWKRNCPRYLAEKRRGKEGKFDLLV
Query: LETCLVEHDEFAWILDSGATNHVCSSFQ-GNDFQQLADGEMTLKVGTGDVVSARAVGAAKLFFRNK----------------------------------
LETCLVE+D+ AWILDSGATNHVCSS Q + F+QL D EMTLKVGTGDV+SARAVG AKLFF NK
Subjt: LETCLVEHDEFAWILDSGATNHVCSSFQ-GNDFQQLADGEMTLKVGTGDVVSARAVGAAKLFFRNK----------------------------------
Query: -------------------------PTDAKAILSHEMFKTAETQNKRQKVSPLSNNTYLWHLRLGHINIDRIDRLVKNGLLTGIEDTSLPPCESCLEGKM
P +AKA+L+HEMF+TA TQNKRQ++SP +NNTYLWHLRLGHIN+DRI RLVKNGLL ++D SLPPCESCLEGKM
Subjt: -------------------------PTDAKAILSHEMFKTAETQNKRQKVSPLSNNTYLWHLRLGHINIDRIDRLVKNGLLTGIEDTSLPPCESCLEGKM
Query: TKRPFTGKGYRAKEPLELIHSDLCGPMNVKARCGYEYFISFIDDYSRYGYLYLMGHKSEALEKFQEFKAEVENLLGKTIKTLRSDRGGEYLDQRFQDYMI
TKRPFTGKGYRAKEPLELIHSDLCGPMNVKAR G+EYFISFIDDYSRYGYLYLM HKSEALEKF+E+K EVENLL K IK LRSDRGGEY+D RFQDYMI
Subjt: TKRPFTGKGYRAKEPLELIHSDLCGPMNVKARCGYEYFISFIDDYSRYGYLYLMGHKSEALEKFQEFKAEVENLLGKTIKTLRSDRGGEYLDQRFQDYMI
Query: EHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVATAVHILNNVPSKSVSETPFELWKGRQPSLRYFRIWGCPAHVLVTNPKKLE
EHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAV TAVHILNNVPSKSVSETPFELW+GR+PSL +FRIWGCPAHVLVTNPKKLE
Subjt: EHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVATAVHILNNVPSKSVSETPFELWKGRQPSLRYFRIWGCPAHVLVTNPKKLE
Query: PRTRICQFVVYPKETRGGL
PR+R+CQFV YPKETRGGL
Subjt: PRTRICQFVVYPKETRGGL
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| A0A5D3BNE1 Gag/pol protein | 4.2e-204 | 63.56 | Show/hide |
Query: ILVVEDLRFVLTEECPPVPPRTAAQAVKDAYERWTKANEKEMFGLPSYQLHHDALKNVFNAK---MLEGQSVREHVLDMINQ--FNIAEANGGVVCERSQ
ILV+ DLRFVL EECPP P + A+Q+V+DAY+RWTKANEK + + ++ ++ + K M+ + + + + +M Q I + +R
Subjt: ILVVEDLRFVLTEECPPVPPRTAAQAVKDAYERWTKANEKEMFGLPSYQLHHDALKNVFNAK---MLEGQSVREHVLDMINQ--FNIAEANGGVVCERSQ
Query: ASS--SKQIQKRKGDKGKAPAQAVQGKGKAKVVADKGRCFHCNADGHWKRNCPRYLAEKRRGKEGKFDLLVLETCLVEHDEFAWILDSGATNHVCSSFQ-
SS S++IQKRK KGK P A++GKGK KVV K + FHCN + HWK NCP+YL +K+ KEGK+DLLVLETCLVE+D+ AWILDSGATNHVCSS Q
Subjt: ASS--SKQIQKRKGDKGKAPAQAVQGKGKAKVVADKGRCFHCNADGHWKRNCPRYLAEKRRGKEGKFDLLVLETCLVEHDEFAWILDSGATNHVCSSFQ-
Query: GNDFQQLADGEMTLKVGTGDVVSARAVGAAKLFFRN-----------------------------------------------------------KPTDA
+ F+QL + EM LKVGTGDV+SARAVG AKLFF N KP +
Subjt: GNDFQQLADGEMTLKVGTGDVVSARAVGAAKLFFRN-----------------------------------------------------------KPTDA
Query: KAILSHEMFKTAETQNKRQKVSPLSNNTYLWHLRLGHINIDRIDRLVKNGLLTGIEDTSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNV
KA+L+HEMF+TA TQNKRQ++S +NNTYLWHLRLGHIN+DRI RLVKNGLL +ED SLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNV
Subjt: KAILSHEMFKTAETQNKRQKVSPLSNNTYLWHLRLGHINIDRIDRLVKNGLLTGIEDTSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNV
Query: KARCGYEYFISFIDDYSRYGYLYLMGHKSEALEKFQEFKAEVENLLGKTIKTLRSDRGGEYLDQRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLD
KA G+EYFISFIDDYS YGYLYL+ HKSEALEKF+E+K EVENLL K IK LRSDRGGEY+D RFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLD
Subjt: KARCGYEYFISFIDDYSRYGYLYLMGHKSEALEKFQEFKAEVENLLGKTIKTLRSDRGGEYLDQRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLD
Query: MVRSMMSYAQLPSSFWGYAVATAVHILNNVPSKSVSETPFELWKGRQPSLRYFRIWGCPAHVLVTNPKKLEPRTRICQFVVYPKETRGGL
MV SMMSY QLPSSFWGYAV TAVHILNNVPSK+V ETPFELW+GR+PSL +FRIW CP HVLVTNPKKLEPR+R+CQFV YPKETRGGL
Subjt: MVRSMMSYAQLPSSFWGYAVATAVHILNNVPSKSVSETPFELWKGRQPSLRYFRIWGCPAHVLVTNPKKLEPRTRICQFVVYPKETRGGL
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| E2GK51 Gag/pol protein (Fragment) | 1.1e-209 | 55.3 | Show/hide |
Query: MSSSIISLLKNEQLTGENFPQWKSNLNTILVVEDLRFVLTEECPPVPPRTAAQAVKDAYERWTKANEK-------------------------------E
M++SI+ LL +E+L G+N+ WKSNLNTILVV+DLRFVLTEECP P A + V++AY+RW KAN+K E
Subjt: MSSSIISLLKNEQLTGENFPQWKSNLNTILVVEDLRFVLTEECPPVPPRTAAQAVKDAYERWTKANEK-------------------------------E
Query: MFGLPSYQLHHDALKNVFNAKMLEGQSVREHVLDMINQFNIAEANGGVVCERSQAS--------------------------------------------
MFG PS+ L H+A+K+++ +M EG SVREHVLDM+ FNIAE NGG + E +Q S
Subjt: MFGLPSYQLHHDALKNVFNAKMLEGQSVREHVLDMINQFNIAEANGGVVCERSQAS--------------------------------------------
Query: ----SSKQIQKRKGDKGKAPAQAV---------QGKGKA------KVVADKGRCFHCNADGHWKRNCPRYLAEKRRGK--EGKFDLLVLETCLVEHDEFA
++ + KRK +G + V +GKGKA K ADKG+CFHCN DGHWKRNCP+YLAEK+ K +GK+DLLV+ETCLVE D
Subjt: ----SSKQIQKRKGDKGKAPAQAV---------QGKGKA------KVVADKGRCFHCNADGHWKRNCPRYLAEKRRGK--EGKFDLLVLETCLVEHDEFA
Query: WILDSGATNHVCSSFQ-GNDFQQLADGEMTLKVGTGDVVSARAVGAAKLFFRN-----------------------------------------------
WILDSGATNH+C SFQ + +++L +GE+TLKVGTG+VVSA AVG LFF++
Subjt: WILDSGATNHVCSSFQ-GNDFQQLADGEMTLKVGTGDVVSARAVGAAKLFFRN-----------------------------------------------
Query: ------------KPTDAKAILSHEMFKTAETQNKRQKVSPLSNNTYLWHLRLGHINIDRIDRLVKNGLLTGIEDTSLPPCESCLEGKMTKRPFTGKGYRA
+PT A +L+ EMF+T ETQNK+QKV S+N YLWHLRLGHIN++RI+RLVK+G+L +ED SLPPCESCLEGKMTKR FTGKG RA
Subjt: ------------KPTDAKAILSHEMFKTAETQNKRQKVSPLSNNTYLWHLRLGHINIDRIDRLVKNGLLTGIEDTSLPPCESCLEGKMTKRPFTGKGYRA
Query: KEPLELIHSDLCGPMNVKARCGYEYFISFIDDYSRYGYLYLMGHKSEALEKFQEFKAEVENLLGKTIKTLRSDRGGEYLDQRFQDYMIEHGIQSQLSAPG
K PLEL+HSDLCGPMNVKAR GYEYFISFIDD+SRYG++YL+ HKSE+ EKF+E+KAEVEN +GKTIKTLRSDRGGEY+D +FQDY+IE GIQSQLSAP
Subjt: KEPLELIHSDLCGPMNVKARCGYEYFISFIDDYSRYGYLYLMGHKSEALEKFQEFKAEVENLLGKTIKTLRSDRGGEYLDQRFQDYMIEHGIQSQLSAPG
Query: TPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVATAVHILNNVPSKSVSETPFELWKGRQPSLRYFRIWGCPAHVLVTNPKKLEPRTRICQFVVYP
TPQQNGVSERRNRTLLDMVRSMMSYAQLP SFWGYA+ TA+HILNNVPSKSV ETP+ELWKGR+ SLRYFRIWGCPAHVLV NPKKLEPR+++C FV YP
Subjt: TPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVATAVHILNNVPSKSVSETPFELWKGRQPSLRYFRIWGCPAHVLVTNPKKLEPRTRICQFVVYP
Query: KETRGGL
KE+RGGL
Subjt: KETRGGL
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| SwissProt top hits | e value | %identity | Alignment |
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| P04146 Copia protein | 2.6e-46 | 29 | Show/hide |
Query: PAQAVQGKGKAKVVADKGRCFHCNADGHWKRNC---PRYLAEKRRGKEGKFD--------LLVLETCLVE-HDEFAWILDSGATNH--------------
P + +G K KV +C HC +GH K++C R L K + E + +V E D ++LDSGA++H
Subjt: PAQAVQGKGKAKVVADKGRCFHCNADGHWKRNC---PRYLAEKRRGKEGKFD--------LLVLETCLVE-HDEFAWILDSGATNH--------------
Query: -----VCSSFQG--------------NDFQQLADGEMTLKVGTGDVVSARAVGAAKL---FFRNKPTDAK----AILSHEMFKTAETQNKRQKV--SPLS
+ + QG ND + + + K G+++S + + A + F ++ T +K + + M N + +
Subjt: -----VCSSFQG--------------NDFQQLADGEMTLKVGTGDVVSARAVGAAKL---FFRNKPTDAK----AILSHEMFKTAETQNKRQKV--SPLS
Query: NNTYLWHLRLGHIN------IDRIDRLVKNGLLTGIEDTSLPPCESCLEGKMTKRPFTGKGYRA--KEPLELIHSDLCGPMNVKARCGYEYFISFIDDYS
NN LWH R GHI+ I R + LL +E S CE CL GK + PF + K PL ++HSD+CGP+ YF+ F+D ++
Subjt: NNTYLWHLRLGHIN------IDRIDRLVKNGLLTGIEDTSLPPCESCLEGKMTKRPFTGKGYRA--KEPLELIHSDLCGPMNVKARCGYEYFISFIDDYS
Query: RYGYLYLMGHKSEALEKFQEFKAEVENLLGKTIKTLRSDRGGEYLDQRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWG
Y YL+ +KS+ FQ+F A+ E + L D G EYL + + ++ GI L+ P TPQ NGVSER RT+ + R+M+S A+L SFWG
Subjt: RYGYLYLMGHKSEALEKFQEFKAEVENLLGKTIKTLRSDRGGEYLDQRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWG
Query: YAVATAVHILNNVPSKSV---SETPFELWKGRQPSLRYFRIWGCPAHVLVTNPK-KLEPRTRICQFVVY
AV TA +++N +PS+++ S+TP+E+W ++P L++ R++G +V + N + K + ++ FV Y
Subjt: YAVATAVHILNNVPSKSV---SETPFELWKGRQPSLRYFRIWGCPAHVLVTNPK-KLEPRTRICQFVVY
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.0e-58 | 30.12 | Show/hide |
Query: KQIQKRKGDKGKAPAQAVQGKGKAKVVADKGRCFHCNADGHWKRNCPRYLAEKRRGKEG-------------KFDLLVL-----ETCL-VEHDEFAWILD
+ Q+ + G++ A +GK K + + C++CN GH+KR+CP K +G+ D +VL E C+ + E W++D
Subjt: KQIQKRKGDKGKAPAQAVQGKGKAKVVADKGRCFHCNADGHWKRNCPRYLAEKRRGKEG-------------KFDLLVL-----ETCL-VEHDEFAWILD
Query: SGATNH------VCSSFQGNDFQQLADGEMTLK--VGTGDVVSARAVGAA---------------------------KLFFRNKP--------TDAKAIL
+ A++H + + DF + G + G GD+ VG + +F N+ AK +
Subjt: SGATNH------VCSSFQGNDFQQLADGEMTLK--VGTGDVVSARAVGAA---------------------------KLFFRNKP--------TDAKAIL
Query: SHEMFKT-AETQNKRQKVSPLSNNTYLWHLRLGHINIDRIDRLVKNGLLTGIEDTSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKAR
+++T AE + + LWH R+GH++ + L K L++ + T++ PC+ CL GK + F R L+L++SD+CGPM +++
Subjt: SHEMFKT-AETQNKRQKVSPLSNNTYLWHLRLGHINIDRIDRLVKNGLLTGIEDTSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKAR
Query: CGYEYFISFIDDYSRYGYLYLMGHKSEALEKFQEFKAEVENLLGKTIKTLRSDRGGEYLDQRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVR
G +YF++FIDD SR ++Y++ K + + FQ+F A VE G+ +K LRSD GGEY + F++Y HGI+ + + PGTPQ NGV+ER NRT+++ VR
Subjt: CGYEYFISFIDDYSRYGYLYLMGHKSEALEKFQEFKAEVENLLGKTIKTLRSDRGGEYLDQRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVR
Query: SMMSYAQLPSSFWGYAVATAVHILNNVPSKSVS-ETPFELWKGRQPSLRYFRIWGCP--AHVLVTNPKKLEPRTRICQFVVYPKETRG
SM+ A+LP SFWG AV TA +++N PS ++ E P +W ++ S + +++GC AHV KL+ ++ C F+ Y E G
Subjt: SMMSYAQLPSSFWGYAVATAVHILNNVPSKSVS-ETPFELWKGRQPSLRYFRIWGCP--AHVLVTNPKKLEPRTRICQFVVYPKETRG
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| Q12491 Transposon Ty2-B Gag-Pol polyprotein | 2.9e-21 | 29.55 | Show/hide |
Query: ILSHEMFKTAETQNKRQKVSPLSNNTY---LWHLRLGHINIDRIDRLVKNGLLTGIEDTSLP-------PCESCLEGKMTKRPFTGKGYRAK-----EPL
I SH T NK + V N Y L H LGH N I + +K +T ++++ + C CL GK TK KG R K EP
Subjt: ILSHEMFKTAETQNKRQKVSPLSNNTY---LWHLRLGHINIDRIDRLVKNGLLTGIEDTSLP-------PCESCLEGKMTKRPFTGKGYRAK-----EPL
Query: ELIHSDLCGPMNVKARCGYEYFISFIDDYSRYGYLYLMGHKSE--ALEKFQEFKAEVENLLGKTIKTLRSDRGGEYLDQRFQDYMIEHGIQSQLSAPGTP
+ +H+D+ GP++ + YFISF D+ +R+ ++Y + + E L F A ++N + ++ DRG EY ++ + GI + +
Subjt: ELIHSDLCGPMNVKARCGYEYFISFIDDYSRYGYLYLMGHKSE--ALEKFQEFKAEVENLLGKTIKTLRSDRGGEYLDQRFQDYMIEHGIQSQLSAPGTP
Query: QQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVATAVHILNNVPS
+ +GV+ER NRTLL+ R+++ + LP+ W AV + I N++ S
Subjt: QQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVATAVHILNNVPS
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 3.3e-41 | 29.08 | Show/hide |
Query: WILDSGATNHVCSSFQGNDFQQLADGEMTLKVGTGDVVSARAVGAAKLFFRNKPTDAKAIL---------------------SHEMF-------------
W+LDSGAT+H+ S F Q G + V G + G+ L +++P + IL S E F
Subjt: WILDSGATNHVCSSFQGNDFQQLADGEMTLKVGTGDVVSARAVGAAKLFFRNKPTDAKAIL---------------------SHEMF-------------
Query: -----KT---------AETQNKRQKVSPLSNNTY-LWHLRLGHINIDRIDRLVKNGLLTGIEDT-SLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSD
KT A +Q SP S T+ WH RLGH ++ ++ N L+ + + C CL K K PF+ + PLE I+SD
Subjt: -----KT---------AETQNKRQKVSPLSNNTY-LWHLRLGHINIDRIDRLVKNGLLTGIEDT-SLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSD
Query: LCGPMNVKARCGYEYFISFIDDYSRYGYLYLMGHKSEALEKFQEFKAEVENLLGKTIKTLRSDRGGEYLDQRFQDYMIEHGIQSQLSAPGTPQQNGVSER
+ + + Y Y++ F+D ++RY +LY + KS+ E F FK +EN I T SD GGE++ +Y +HGI S P TP+ NG+SER
Subjt: LCGPMNVKARCGYEYFISFIDDYSRYGYLYLMGHKSEALEKFQEFKAEVENLLGKTIKTLRSDRGGEYLDQRFQDYMIEHGIQSQLSAPGTPQQNGVSER
Query: RNRTLLDMVRSMMSYAQLPSSFWGYAVATAVHILNNVPSKSVS-ETPFELWKGRQPSLRYFRIWGCPAHVLVT--NPKKLEPRTRICQFVVY
++R +++ +++S+A +P ++W YA A AV+++N +P+ + E+PF+ G P+ R++GC + + N KL+ ++R C F+ Y
Subjt: RNRTLLDMVRSMMSYAQLPSSFWGYAVATAVHILNNVPSKSVS-ETPFELWKGRQPSLRYFRIWGCPAHVLVT--NPKKLEPRTRICQFVVY
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 9.4e-44 | 26.31 | Show/hide |
Query: REHVLDMINQFNIAEANGGVVCERSQASSSKQIQKRKGDKGK-----------APAQAVQGKGKAKVVADKGRCFHCNADGHWKRNCPR----YLAEKRR
RE L +N + VV R+ +++ + Q +GD P+ + + GRC C+ GH + CP+ ++
Subjt: REHVLDMINQFNIAEANGGVVCERSQASSSKQIQKRKGDKGK-----------APAQAVQGKGKAKVVADKGRCFHCNADGHWKRNCPR----YLAEKRR
Query: GKEGKFDLLVLETCLVEHDEF---AWILDSGATNHVCSSFQGNDFQQLADGEMTLKVGTGDVVSARAVGAAKLFFRNKPTDAKAIL--------------
F L + + W+LDSGAT+H+ S F F Q G + + G + G+A L ++ D +L
Subjt: GKEGKFDLLVLETCLVEHDEF---AWILDSGATNHVCSSFQGNDFQQLADGEMTLKVGTGDVVSARAVGAAKLFFRNKPTDAKAIL--------------
Query: -------SHEMF------------------KT---------AETQNKRQKVSPLSNNTY-LWHLRLGHINIDRIDRLVKNGLLTGIEDT-SLPPCESCLE
S E F KT A +Q SP S T+ WH RLGH ++ ++ ++ N L + + L C C
Subjt: -------SHEMF------------------KT---------AETQNKRQKVSPLSNNTY-LWHLRLGHINIDRIDRLVKNGLLTGIEDT-SLPPCESCLE
Query: GKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARCGYEYFISFIDDYSRYGYLYLMGHKSEALEKFQEFKAEVENLLGKTIKTLRSDRGGEYLDQRFQD
K K PF+ + +PLE I+SD+ + + Y Y++ F+D ++RY +LY + KS+ + F FK+ VEN I TL SD GGE++ R D
Subjt: GKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARCGYEYFISFIDDYSRYGYLYLMGHKSEALEKFQEFKAEVENLLGKTIKTLRSDRGGEYLDQRFQD
Query: YMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVATAVHILNNVPSKSVS-ETPFELWKGRQPSLRYFRIWGCPAHVLVT--
Y+ +HGI S P TP+ NG+SER++R +++M +++S+A +P ++W YA + AV+++N +P+ + ++PF+ G+ P+ +++GC + +
Subjt: YMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVATAVHILNNVPSKSVS-ETPFELWKGRQPSLRYFRIWGCPAHVLVT--
Query: NPKKLEPRTRICQFVVY
N KLE +++ C F+ Y
Subjt: NPKKLEPRTRICQFVVY
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