; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0008371 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0008371
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionGag/pol protein
Genome locationchr9:19316328..19316693
RNA-Seq ExpressionLag0008371
SyntenyLag0008371
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032937.1 gag/pol protein [Cucumis melo var. makuwa]4.3e-1650.88Show/hide
Query:  EVNGGVVCERNQVAFILHSLLPNFMQFRMNASMSKIQFNLITLLNELQIYESILKRKGKNVVKGEANVPHSKKTFLKGSSSRMKSVPQASSKQIQKRKGD
        EVNGG + E NQV FIL SL  +F+ F+ NAS++KI+FNL TL+NELQ ++++ K KGK V   EANV  +K+ F +GSSS+ K+ P  S+++I+K+  +
Subjt:  EVNGGVVCERNQVAFILHSLLPNFMQFRMNASMSKIQFNLITLLNELQIYESILKRKGKNVVKGEANVPHSKKTFLKGSSSRMKSVPQASSKQIQKRKGD

Query:  KGKAPVQAVQGKGK
        KGK P    Q KGK
Subjt:  KGKAPVQAVQGKGK

KAA0033208.1 gag/pol protein [Cucumis melo var. makuwa]1.5e-1653.27Show/hide
Query:  EVNGGVVCERNQVAFILHSLLPNFMQFRMNASMSKIQFNLITLLNELQIYESILKRKGKNVVKGEANVPHSKKTFLKGSSSRMKSVPQASSKQIQKRKGD
        EVNGG + E NQV+FIL SLL +F+ F+MNAS++KI+FNL  LLNELQ ++++ K KGK V   EANV  +K+ F +GSSS+ K  P  S+++I+K+   
Subjt:  EVNGGVVCERNQVAFILHSLLPNFMQFRMNASMSKIQFNLITLLNELQIYESILKRKGKNVVKGEANVPHSKKTFLKGSSSRMKSVPQASSKQIQKRKGD

Query:  KGKAPVQ
        KGK P Q
Subjt:  KGKAPVQ

KAA0035676.1 gag/pol protein [Cucumis melo var. makuwa]3.5e-1853.1Show/hide
Query:  EVNGGVVCERNQVAFILHSLLPNFMQFRMNASMSKIQFNLITLLNELQIYESILKRKGKNVVKGEANVPHSKKTFLKGSSSRMKSVPQASSKQIQKRKGD
        EVNGG + E NQV+FIL SLL +F+ F+ NAS++KI+FNL TLLNELQ ++++ K KGK V   EANV  +K  F +GS S+ K+ P  S++ I+K++  
Subjt:  EVNGGVVCERNQVAFILHSLLPNFMQFRMNASMSKIQFNLITLLNELQIYESILKRKGKNVVKGEANVPHSKKTFLKGSSSRMKSVPQASSKQIQKRKGD

Query:  KGKAPVQAVQGKG
        KGK P +AV GKG
Subjt:  KGKAPVQAVQGKG

KAA0046844.1 gag/pol protein [Cucumis melo var. makuwa]7.4e-1651.26Show/hide
Query:  EVNGGVVCERNQVAFILHSLLPNFMQFRMNASMSKIQFNLITLLNELQIYESILKRKGKNVVKGEANVPHSKKTFLKGSSSRMKSVPQAS-SKQIQKRKG
        E+NG V+ E NQV+FIL SLL +F+QFR N  M+KI + L TLLNELQ +ES++K KG+   KGEANV  S + F +GS+S  K +P +S +K+ +K+KG
Subjt:  EVNGGVVCERNQVAFILHSLLPNFMQFRMNASMSKIQFNLITLLNELQIYESILKRKGKNVVKGEANVPHSKKTFLKGSSSRMKSVPQAS-SKQIQKRKG

Query:  DKG-KAPVQAVQGKGKAKV
         +G KA + A +   KAKV
Subjt:  DKG-KAPVQAVQGKGKAKV

XP_038874988.1 uncharacterized protein LOC120067510 [Benincasa hispida]1.0e-1755.08Show/hide
Query:  EVNGGVVCERNQVAFILHSLLPNFMQFRMNASMSKIQFNLITLLNELQIYESILKRKGKNVVKGEANVPHSKKTFLKGSSSRMKSVPQAS-SKQIQKRKG
        E NG V+ ER+QVAFIL SL   F+QFR+NA M K QFNL           S+LK KGK  ++ EA+V HSK+ F KG SS  K+V Q+S SK+IQK KG
Subjt:  EVNGGVVCERNQVAFILHSLLPNFMQFRMNASMSKIQFNLITLLNELQIYESILKRKGKNVVKGEANVPHSKKTFLKGSSSRMKSVPQAS-SKQIQKRKG

Query:  DKGKAPVQAVQGKGKAKV
        +KGKAP  A +GKGK K+
Subjt:  DKGKAPVQAVQGKGKAKV

TrEMBL top hitse value%identityAlignment
A0A5A7SRP3 Gag/pol protein7.2e-1753.27Show/hide
Query:  EVNGGVVCERNQVAFILHSLLPNFMQFRMNASMSKIQFNLITLLNELQIYESILKRKGKNVVKGEANVPHSKKTFLKGSSSRMKSVPQASSKQIQKRKGD
        EVNGG + E NQV+FIL SLL +F+ F+MNAS++KI+FNL  LLNELQ ++++ K KGK V   EANV  +K+ F +GSSS+ K  P  S+++I+K+   
Subjt:  EVNGGVVCERNQVAFILHSLLPNFMQFRMNASMSKIQFNLITLLNELQIYESILKRKGKNVVKGEANVPHSKKTFLKGSSSRMKSVPQASSKQIQKRKGD

Query:  KGKAPVQ
        KGK P Q
Subjt:  KGKAPVQ

A0A5A7SUC7 Gag/pol protein2.1e-1650.88Show/hide
Query:  EVNGGVVCERNQVAFILHSLLPNFMQFRMNASMSKIQFNLITLLNELQIYESILKRKGKNVVKGEANVPHSKKTFLKGSSSRMKSVPQASSKQIQKRKGD
        EVNGG + E NQV FIL SL  +F+ F+ NAS++KI+FNL TL+NELQ ++++ K KGK V   EANV  +K+ F +GSSS+ K+ P  S+++I+K+  +
Subjt:  EVNGGVVCERNQVAFILHSLLPNFMQFRMNASMSKIQFNLITLLNELQIYESILKRKGKNVVKGEANVPHSKKTFLKGSSSRMKSVPQASSKQIQKRKGD

Query:  KGKAPVQAVQGKGK
        KGK P    Q KGK
Subjt:  KGKAPVQAVQGKGK

A0A5A7T0E9 Gag/pol protein1.7e-1853.1Show/hide
Query:  EVNGGVVCERNQVAFILHSLLPNFMQFRMNASMSKIQFNLITLLNELQIYESILKRKGKNVVKGEANVPHSKKTFLKGSSSRMKSVPQASSKQIQKRKGD
        EVNGG + E NQV+FIL SLL +F+ F+ NAS++KI+FNL TLLNELQ ++++ K KGK V   EANV  +K  F +GS S+ K+ P  S++ I+K++  
Subjt:  EVNGGVVCERNQVAFILHSLLPNFMQFRMNASMSKIQFNLITLLNELQIYESILKRKGKNVVKGEANVPHSKKTFLKGSSSRMKSVPQASSKQIQKRKGD

Query:  KGKAPVQAVQGKG
        KGK P +AV GKG
Subjt:  KGKAPVQAVQGKG

A0A5A7UA90 Gag/pol protein3.6e-1650Show/hide
Query:  EVNGGVVCERNQVAFILHSLLPNFMQFRMNASMSKIQFNLITLLNELQIYESILKRKGKNVVKGEANVPHSKKTFLKGSSSRMKSVPQASSKQIQKRKGD
        EVNGG + E NQV+FIL SL  +F+ F+MNAS++KI+FNL TLLNELQ ++++ K KGK V   EANV  +K+ F +GSSS+ K+ P   + +I+K+   
Subjt:  EVNGGVVCERNQVAFILHSLLPNFMQFRMNASMSKIQFNLITLLNELQIYESILKRKGKNVVKGEANVPHSKKTFLKGSSSRMKSVPQASSKQIQKRKGD

Query:  KGKAPVQAVQGKGKAK
        KGK P Q  + K   K
Subjt:  KGKAPVQAVQGKGKAK

A0A5D3C269 Gag/pol protein3.6e-1651.26Show/hide
Query:  EVNGGVVCERNQVAFILHSLLPNFMQFRMNASMSKIQFNLITLLNELQIYESILKRKGKNVVKGEANVPHSKKTFLKGSSSRMKSVPQAS-SKQIQKRKG
        E+NG V+ E NQV+FIL SLL +F+QFR N  M+KI + L TLLNELQ +ES++K KG+   KGEANV  S + F +GS+S  K +P +S +K+ +K+KG
Subjt:  EVNGGVVCERNQVAFILHSLLPNFMQFRMNASMSKIQFNLITLLNELQIYESILKRKGKNVVKGEANVPHSKKTFLKGSSSRMKSVPQAS-SKQIQKRKG

Query:  DKG-KAPVQAVQGKGKAKV
         +G KA + A +   KAKV
Subjt:  DKG-KAPVQAVQGKGKAKV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAGAGGTGAACGGCGGGGTTGTCTGCGAGCGCAACCAGGTTGCGTTCATCCTGCATTCTCTTCTTCCTAACTTCATGCAGTTCAGGATGAATGCTAGCATGAGCAA
AATACAGTTCAACCTGATCACCCTCCTCAACGAGCTACAGATTTATGAGTCCATCCTGAAACGCAAGGGCAAGAATGTGGTGAAAGGAGAGGCCAATGTGCCCCATTCCA
AGAAAACGTTCCTAAAGGGTTCATCCTCAAGAATGAAATCTGTACCTCAGGCTTCTTCGAAGCAAATTCAAAAGAGGAAGGGTGATAAGGGGAAGGCTCCTGTGCAGGCT
GTTCAGGGTAAAGGGAAGGCCAAGGTCATTTTATGA
mRNA sequenceShow/hide mRNA sequence
ATGCAAGAGGTGAACGGCGGGGTTGTCTGCGAGCGCAACCAGGTTGCGTTCATCCTGCATTCTCTTCTTCCTAACTTCATGCAGTTCAGGATGAATGCTAGCATGAGCAA
AATACAGTTCAACCTGATCACCCTCCTCAACGAGCTACAGATTTATGAGTCCATCCTGAAACGCAAGGGCAAGAATGTGGTGAAAGGAGAGGCCAATGTGCCCCATTCCA
AGAAAACGTTCCTAAAGGGTTCATCCTCAAGAATGAAATCTGTACCTCAGGCTTCTTCGAAGCAAATTCAAAAGAGGAAGGGTGATAAGGGGAAGGCTCCTGTGCAGGCT
GTTCAGGGTAAAGGGAAGGCCAAGGTCATTTTATGA
Protein sequenceShow/hide protein sequence
MQEVNGGVVCERNQVAFILHSLLPNFMQFRMNASMSKIQFNLITLLNELQIYESILKRKGKNVVKGEANVPHSKKTFLKGSSSRMKSVPQASSKQIQKRKGDKGKAPVQA
VQGKGKAKVIL