; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0008374 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0008374
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotransposon gag protein
Genome locationchr9:19364955..19365686
RNA-Seq ExpressionLag0008374
SyntenyLag0008374
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022947838.1 uncharacterized protein LOC111451598 [Cucurbita moschata]1.2e-3741.63Show/hide
Query:  METFYNGLNGATQGMVDASAGGALLVKTFNEAHEILGRISTNSCQWSDVKGT-NKKVKSVLEVDGVSIIRANHAMIANDLKNVTW-IGHQQPPTVESAAL
        +ETFYNGLN AT+ +VDASA G +L KT+NEA+EIL RI++N+CQW DV+    KK + VLEVD +S I A  A + N L+N+ +  G        +A +
Subjt:  METFYNGLNGATQGMVDASAGGALLVKTFNEAHEILGRISTNSCQWSDVKGT-NKKVKSVLEVDGVSIIRANHAMIANDLKNVTW-IGHQQPPTVESAAL

Query:  VNQVAEEACVYCGEDHNYGFFPSNPASVFF---------QKVNQS----------------------------------GFAKAQVLPQQNKEALPQQN-
        + Q A E+CVYCGE H +   PSNPAS+F+          K N S                                  GF     L   +++A  Q   
Subjt:  VNQVAEEACVYCGEDHNYGFFPSNPASVFF---------QKVNQS----------------------------------GFAKAQVLPQQNKEALPQQN-

Query:  -------SGSSLEAMMKEYMARTDTAIQSNQASMRALELKVGQLANELKARPQGKLP
               SG+ LE+++KEYMAR D  IQS Q S+R LE++VGQLANEL+ RP GKLP
Subjt:  -------SGSSLEAMMKEYMARTDTAIQSNQASMRALELKVGQLANELKARPQGKLP

XP_023521781.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111785639, partial [Cucurbita pepo subsp. pepo]5.5e-3539.92Show/hide
Query:  METFYNGLNGATQGMVDASAGGALLVKTFNEAHEILGRISTNSCQWSDVKGT-NKKVKSVLEVDGVSIIRANHAMIANDLKNVTWIGHQQ--PPTVESAA
        METFYNGLN AT+ +VDASA GA+L KT+NEA+EIL RI++N+CQW+DV+    +K + VLEVD +S I A  A + N L+N+  +G        V +AA
Subjt:  METFYNGLNGATQGMVDASAGGALLVKTFNEAHEILGRISTNSCQWSDVKGT-NKKVKSVLEVDGVSIIRANHAMIANDLKNVTWIGHQQ--PPTVESAA

Query:  LVNQVAEEACVYCGEDHNYGFFPSNPASVF---------------------------------------------------FQKVNQSGFAKAQVLPQQN
        ++NQ A E+CV CGE+H +    SN  S+F                                                   F   NQ  +   Q   Q  
Subjt:  LVNQVAEEACVYCGEDHNYGFFPSNPASVF---------------------------------------------------FQKVNQSGFAKAQVLPQQN

Query:  KEALPQQNSGSSLEAMMKEYMARTDTAIQSNQASMRALELKVGQLANELKARP
          +  Q   G+SLE+++KEYMA+ D  IQS QAS+R LE++VGQLANEL+ RP
Subjt:  KEALPQQNSGSSLEAMMKEYMARTDTAIQSNQASMRALELKVGQLANELKARP

XP_023532393.1 uncharacterized protein LOC111794553 [Cucurbita pepo subsp. pepo]1.3e-3639.92Show/hide
Query:  METFYNGLNGATQGMVDASAGGALLVKTFNEAHEILGRISTNSCQWSDVKGT-NKKVKSVLEVDGVSIIRANHAMIANDLKNVTWIGHQQ--PPTVESAA
        METFY+GLN AT+ +VDASA GA+L KT+NEA+EIL RI++N+ QW+DV+     K + VLEVD +S I+A  A + N L+N+  +G        V +AA
Subjt:  METFYNGLNGATQGMVDASAGGALLVKTFNEAHEILGRISTNSCQWSDVKGT-NKKVKSVLEVDGVSIIRANHAMIANDLKNVTWIGHQQ--PPTVESAA

Query:  LVNQVAEEACVYCGEDHNYGFFPSNPASVF---------------------------------------------------FQKVNQSGFAKAQVLPQQN
        ++NQ   E+CVYCGE++ +   PSN AS+F                                                   F   NQ  +   QV  Q  
Subjt:  LVNQVAEEACVYCGEDHNYGFFPSNPASVF---------------------------------------------------FQKVNQSGFAKAQVLPQQN

Query:  KEALPQQNSGSSLEAMMKEYMARTDTAIQSNQASMRALELKVGQLANELKARPQGKLP
          +  Q  SG+S+E++++EYMA+ D  IQS QAS+R LE++VGQLA EL+ RP GKLP
Subjt:  KEALPQQNSGSSLEAMMKEYMARTDTAIQSNQASMRALELKVGQLANELKARPQGKLP

XP_030494802.1 uncharacterized protein LOC115710583 [Cannabis sativa]1.4e-3846.05Show/hide
Query:  METFYNGLNGATQGMVDASAGGALLVKTFNEAHEILGRISTNSCQWSDVKG-TNKKVKSVLEVDGVSIIRANHAMIANDLKNVTWIGHQQPPTVESAALV
        +ETFYNGLN A++ ++DASA GA+L K++NEA EIL RI++N+ QWS  +  T++KV  VLEVD ++ + A  A + N LKN+   G  QP      A  
Subjt:  METFYNGLNGATQGMVDASAGGALLVKTFNEAHEILGRISTNSCQWSDVKG-TNKKVKSVLEVDGVSIIRANHAMIANDLKNVTWIGHQQPPTVESAALV

Query:  NQVAEEACVYCGEDHNYGFFPSNPASVFFQKVNQSGFAKAQ----------VLPQQNKEALPQQNSGSSLEAMMKEYMARTDTAIQSNQASMRALELKVG
         Q AE +CVYCG+ H +   PSNPASV +   + SG  +AQ            P+  +   PQ +  SSLE++M++YMA+ D  IQS  AS++ LE+++G
Subjt:  NQVAEEACVYCGEDHNYGFFPSNPASVFFQKVNQSGFAKAQ----------VLPQQNKEALPQQNSGSSLEAMMKEYMARTDTAIQSNQASMRALELKVG

Query:  QLANELKARPQGKLP
        QLAN+LK RPQG LP
Subjt:  QLANELKARPQGKLP

XP_030509259.1 uncharacterized protein LOC115723937 [Cannabis sativa]7.2e-3541.06Show/hide
Query:  METFYNGLNGATQGMVDASAGGALLVKTFNEAHEILGRISTNSCQWSDVKG-TNKKVKSVLEVDGVSIIRANHAMIANDLKNVTWIGHQQPPTVESAALV
        +ETFYNGLN A++ ++DASA GA+L K++NEA EIL RI++N+ QWS  +  T++KV  VLEVD ++ + A  A + N LKN+   G  QP      A  
Subjt:  METFYNGLNGATQGMVDASAGGALLVKTFNEAHEILGRISTNSCQWSDVKG-TNKKVKSVLEVDGVSIIRANHAMIANDLKNVTWIGHQQPPTVESAALV

Query:  NQVAEEACVYCGEDHNYGFFPSNPASVFF-------------------------------QKVNQSGFAKAQ----------VLPQQNKEALPQQNSGSS
         Q AE +CVYCG+ H +   PSNPASV +                               Q  + SG  +AQ            P+  +   PQ +  SS
Subjt:  NQVAEEACVYCGEDHNYGFFPSNPASVFF-------------------------------QKVNQSGFAKAQ----------VLPQQNKEALPQQNSGSS

Query:  LEAMMKEYMARTDTAIQSNQASMRALELKVGQLANELKARPQGKLP
        LE++M++YMA+ D  IQS  AS+R LE+++GQLAN+LK RPQG LP
Subjt:  LEAMMKEYMARTDTAIQSNQASMRALELKVGQLANELKARPQGKLP

TrEMBL top hitse value%identityAlignment
A0A5B6VWJ0 Retroelement pol polyprotein-like2.5e-2536.99Show/hide
Query:  METFYNGLNGATQGMVDASAGGALLVKTFNEAHEILGRISTNSCQWSDVK-GTNKKVKSVLEVDGVSIIRANHAMIANDLKNVTWIGHQ----QPPTVES
        +ETFYNGL   T+ +VDASA GALL K++NEA+EI+ RI++N+ QW   +  + ++V  + EVD ++ + +  + I++  KN+T  G      QPP    
Subjt:  METFYNGLNGATQGMVDASAGGALLVKTFNEAHEILGRISTNSCQWSDVK-GTNKKVKSVLEVDGVSIIRANHAMIANDLKNVTWIGHQ----QPPTVES

Query:  AALVNQVAEEACVYCGEDHNYGFFPSNPASVFF---QKVN------QSGF--------------------------AKAQVLPQ--QNKEALPQQNSGSS
            NQ    A VYCGE H     PSNP SV++   Q  N      QS F                           +   LP   Q  + L Q  + +S
Subjt:  AALVNQVAEEACVYCGEDHNYGFFPSNPASVFF---QKVN------QSGF--------------------------AKAQVLPQ--QNKEALPQQNSGSS

Query:  LEAMMKEYMARTDTAIQSNQASMRALELKVGQLANELKARPQGKLP
        LE+++K YMA+ D  IQS  A+++ LE +VGQLA EL+ R QG LP
Subjt:  LEAMMKEYMARTDTAIQSNQASMRALELKVGQLANELKARPQGKLP

A0A6J1EEI2 uncharacterized protein LOC1114333941.6e-3238.59Show/hide
Query:  METFYNGLNGATQGMVDASAGGALLVKTFNEAHEILGRISTNSCQWSDVKGT-NKKVKSVLEVDGVSIIRANHAMIANDLKNVTWIGHQQ--PPTVESAA
        METFYNGLN AT+ +VDASA GA+L KT+NEA+EIL RI++N+CQW+DV+    +K + VLEVD +S I A  A + N L+N+  +G        V + A
Subjt:  METFYNGLNGATQGMVDASAGGALLVKTFNEAHEILGRISTNSCQWSDVKGT-NKKVKSVLEVDGVSIIRANHAMIANDLKNVTWIGHQQ--PPTVESAA

Query:  LVNQVAEEACVYCGEDHNYGFFPSNPASVF---------------------------------------------------FQKVNQSGFAKAQVLPQQN
        ++NQ A E+CVYCGE+H +   PSNPAS+F                                                   F   NQ  ++  QV  Q  
Subjt:  LVNQVAEEACVYCGEDHNYGFFPSNPASVF---------------------------------------------------FQKVNQSGFAKAQVLPQQN

Query:  KEALPQQNSGSSLEAMMKEYMARTDTAIQSNQASMRALELK
             Q   G+S+E+++KEYMA+ D  IQ+ QAS+R LE++
Subjt:  KEALPQQNSGSSLEAMMKEYMARTDTAIQSNQASMRALELK

A0A6J1EQ90 uncharacterized protein LOC1114364113.8e-3439.09Show/hide
Query:  METFYNGLNGATQGMVDASAGGALLVKTFNEAHEILGRISTNSCQWSDVKGT-NKKVKSVLEVDGVSIIRANHAMIANDLKNVTWIGHQQ--PPTVESAA
        METFYNGLN  T+ +VDASA GA+L KT+NEA+EIL RI++N+CQW+DV+    +K + VLEVD +S I A  A + N L+N+  +G        V +AA
Subjt:  METFYNGLNGATQGMVDASAGGALLVKTFNEAHEILGRISTNSCQWSDVKGT-NKKVKSVLEVDGVSIIRANHAMIANDLKNVTWIGHQQ--PPTVESAA

Query:  LVNQVAEEACVYCGEDHNYGFFPSNPASVF---------------------------------------------------FQKVNQSGFAKAQVLPQQN
         +NQ A E+CVYCGE+H +   PSNPAS+F                                                   F+  NQ  ++  QV  Q  
Subjt:  LVNQVAEEACVYCGEDHNYGFFPSNPASVF---------------------------------------------------FQKVNQSGFAKAQVLPQQN

Query:  KEALPQQNSGSSLEAMMKEYMARTDTAIQSNQASMRALELKVG
             Q  S +S+E+++KEYMA+ D  IQS QAS+R LE+++G
Subjt:  KEALPQQNSGSSLEAMMKEYMARTDTAIQSNQASMRALELKVG

A0A6J1G7Q6 uncharacterized protein LOC1114515985.7e-3841.63Show/hide
Query:  METFYNGLNGATQGMVDASAGGALLVKTFNEAHEILGRISTNSCQWSDVKGT-NKKVKSVLEVDGVSIIRANHAMIANDLKNVTW-IGHQQPPTVESAAL
        +ETFYNGLN AT+ +VDASA G +L KT+NEA+EIL RI++N+CQW DV+    KK + VLEVD +S I A  A + N L+N+ +  G        +A +
Subjt:  METFYNGLNGATQGMVDASAGGALLVKTFNEAHEILGRISTNSCQWSDVKGT-NKKVKSVLEVDGVSIIRANHAMIANDLKNVTW-IGHQQPPTVESAAL

Query:  VNQVAEEACVYCGEDHNYGFFPSNPASVFF---------QKVNQS----------------------------------GFAKAQVLPQQNKEALPQQN-
        + Q A E+CVYCGE H +   PSNPAS+F+          K N S                                  GF     L   +++A  Q   
Subjt:  VNQVAEEACVYCGEDHNYGFFPSNPASVFF---------QKVNQS----------------------------------GFAKAQVLPQQNKEALPQQN-

Query:  -------SGSSLEAMMKEYMARTDTAIQSNQASMRALELKVGQLANELKARPQGKLP
               SG+ LE+++KEYMAR D  IQS Q S+R LE++VGQLANEL+ RP GKLP
Subjt:  -------SGSSLEAMMKEYMARTDTAIQSNQASMRALELKVGQLANELKARPQGKLP

A0A6J1H7E4 uncharacterized protein LOC1114611681.6e-2747.97Show/hide
Query:  METFYNGLNGATQGMVDASAGGALLVKTFNEAHEILGRISTNSCQWSDVKGT-NKKVKSVLEVDGVSIIRANHAMIANDLKNVTW-IGHQQPPTVESAAL
        METFYNGLN AT+ +VDASA GA+L KT+NEA+EIL RI++N+CQW+DV+    KK + VLEVD +S I A  A + N L+N+ +  G        +AA+
Subjt:  METFYNGLNGATQGMVDASAGGALLVKTFNEAHEILGRISTNSCQWSDVKGT-NKKVKSVLEVDGVSIIRANHAMIANDLKNVTW-IGHQQPPTVESAAL

Query:  VNQVAEEACVYCGEDHNYGFFPSNPASVFFQKVNQSGFAKAQVLPQQN
        + Q A E+CVYCGE+H +   P NPAS+ + + NQ+     +  P  N
Subjt:  VNQVAEEACVYCGEDHNYGFFPSNPASVFFQKVNQSGFAKAQVLPQQN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAACATTTTATAATGGGCTAAACGGAGCAACCCAGGGTATGGTTGATGCTTCGGCTGGAGGGGCTCTTTTGGTAAAAACTTTTAATGAAGCCCATGAAATT
TTAGGAAGAATATCTACTAATAGTTGTCAGTGGTCGGATGTTAAAGGCACAAATAAAAAGGTTAAAAGTGTATTAGAGGTTGATGGTGTGTCCATCATTAGGGCT
AATCATGCAATGATTGCTAACGATCTTAAGAATGTGACATGGATTGGTCATCAGCAGCCACCAACTGTGGAGTCTGCTGCTTTGGTGAACCAAGTCGCAGAGGAA
GCATGTGTCTATTGTGGTGAAGATCACAACTACGGGTTTTTCCCCAGTAATCCAGCTTCTGTGTTTTTTCAAAAGGTGAACCAGTCGGGATTTGCTAAAGCGCAG
GTATTGCCCCAACAAAATAAGGAGGCGCTGCCCCAGCAAAATTCGGGGAGTTCTCTTGAGGCGATGATGAAAGAATATATGGCTCGTACAGATACCGCAATTCAA
AGTAATCAAGCATCAATGAGAGCCCTGGAATTGAAAGTGGGTCAGCTAGCTAATGAGCTGAAGGCAAGGCCTCAAGGGAAACTTCCTTTTATAGAAGAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAACATTTTATAATGGGCTAAACGGAGCAACCCAGGGTATGGTTGATGCTTCGGCTGGAGGGGCTCTTTTGGTAAAAACTTTTAATGAAGCCCATGAAATT
TTAGGAAGAATATCTACTAATAGTTGTCAGTGGTCGGATGTTAAAGGCACAAATAAAAAGGTTAAAAGTGTATTAGAGGTTGATGGTGTGTCCATCATTAGGGCT
AATCATGCAATGATTGCTAACGATCTTAAGAATGTGACATGGATTGGTCATCAGCAGCCACCAACTGTGGAGTCTGCTGCTTTGGTGAACCAAGTCGCAGAGGAA
GCATGTGTCTATTGTGGTGAAGATCACAACTACGGGTTTTTCCCCAGTAATCCAGCTTCTGTGTTTTTTCAAAAGGTGAACCAGTCGGGATTTGCTAAAGCGCAG
GTATTGCCCCAACAAAATAAGGAGGCGCTGCCCCAGCAAAATTCGGGGAGTTCTCTTGAGGCGATGATGAAAGAATATATGGCTCGTACAGATACCGCAATTCAA
AGTAATCAAGCATCAATGAGAGCCCTGGAATTGAAAGTGGGTCAGCTAGCTAATGAGCTGAAGGCAAGGCCTCAAGGGAAACTTCCTTTTATAGAAGAATAG
Protein sequenceShow/hide protein sequence
METFYNGLNGATQGMVDASAGGALLVKTFNEAHEILGRISTNSCQWSDVKGTNKKVKSVLEVDGVSIIRANHAMIANDLKNVTWIGHQQPPTVESAALVNQVAEE
ACVYCGEDHNYGFFPSNPASVFFQKVNQSGFAKAQVLPQQNKEALPQQNSGSSLEAMMKEYMARTDTAIQSNQASMRALELKVGQLANELKARPQGKLPFIEE