; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0008380 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0008380
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotransposon gag protein
Genome locationchr9:19653476..19657254
RNA-Seq ExpressionLag0008380
SyntenyLag0008380
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025725.1 retrotransposon gag protein [Cucumis melo var. makuwa]9.6e-3165.6Show/hide
Query:  EEVDNSKKSEQRTSVFDCIKPPTTRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSDQPKRKMDNFEVKLYDEVNSG
        EEVDNS + +QRTSVFD IKP TTR S FQR+SMA  EEENQC  ST  R SAF+RLS+STSKK RPSTS FDRLK+T+DQ +R+M + + K + E N  
Subjt:  EEVDNSKKSEQRTSVFDCIKPPTTRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSDQPKRKMDNFEVKLYDEVNSG

Query:  KKLQSSISSRMKRKFSVLINTEGSL
         K++S +SSRMKRK SV INTEGSL
Subjt:  KKLQSSISSRMKRKFSVLINTEGSL

KAA0036008.1 Retrotransposon gag protein [Cucumis melo var. makuwa]4.3e-3163.04Show/hide
Query:  EKENLATSYCIDVEEVDNSKKSEQRTSVFDCIKPPTTRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSDQPKRKMD
        E +N   SY    EEVDNS + +QRTSVFD IKP TTR  VFQR+SMA  EEENQC MST  R SAF+RLS+STSKK RPSTS FDRLK+T+DQ +R+M 
Subjt:  EKENLATSYCIDVEEVDNSKKSEQRTSVFDCIKPPTTRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSDQPKRKMD

Query:  NFEVKLYDEVNSGKKLQSSISSRMKRKFSVLINTEGSL
        +F+ K + E N   K+ S + SRMKRK SV INTEGSL
Subjt:  NFEVKLYDEVNSGKKLQSSISSRMKRKFSVLINTEGSL

KAA0044978.1 retrotransposon gag protein [Cucumis melo var. makuwa]1.6e-3065.6Show/hide
Query:  EEVDNSKKSEQRTSVFDCIKPPTTRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSDQPKRKMDNFEVKLYDEVNSG
        EEVDNS + +QRTSVFD IKP TTR SVFQR+SMA  EEENQC  ST  R SAF+RLS+STSKK RPSTS FDRLK+T+DQ +R+M + + K + E N  
Subjt:  EEVDNSKKSEQRTSVFDCIKPPTTRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSDQPKRKMDNFEVKLYDEVNSG

Query:  KKLQSSISSRMKRKFSVLINTEGSL
         K+ S + SRMKRK SV INTEGSL
Subjt:  KKLQSSISSRMKRKFSVLINTEGSL

KAA0050736.1 retrotransposon gag protein [Cucumis melo var. makuwa]2.8e-3061.59Show/hide
Query:  EKENLATSYCIDVEEVDNSKKSEQRTSVFDCIKPPTTRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSDQPKRKMD
        E +N   SY    EEVDNS + +QRTSVFD IKP TTR SVFQR+SMA  EEENQC MST TR SAF+RLS+S SKK RPSTS FDRLK+T+DQ +R+M 
Subjt:  EKENLATSYCIDVEEVDNSKKSEQRTSVFDCIKPPTTRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSDQPKRKMD

Query:  NFEVKLYDEVNSGKKLQSSISSRMKRKFSVLINTEGSL
        + + K + E N   K+ S + SR+KRK S+ INTEGSL
Subjt:  NFEVKLYDEVNSGKKLQSSISSRMKRKFSVLINTEGSL

TYK16519.1 retrotransposon gag protein [Cucumis melo var. makuwa]2.1e-3062.32Show/hide
Query:  EKENLATSYCIDVEEVDNSKKSEQRTSVFDCIKPPTTRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSDQPKRKMD
        E +N   SY    EEVDNS + +QRTSVFD IKP TTR  VFQR+SMA  EEENQC  ST  R SAF+RLS+STSKK RPSTS FDRLK+T++Q KR+M 
Subjt:  EKENLATSYCIDVEEVDNSKKSEQRTSVFDCIKPPTTRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSDQPKRKMD

Query:  NFEVKLYDEVNSGKKLQSSISSRMKRKFSVLINTEGSL
        +F+ K + E N   K+ S + SRMKRK SV INTEGSL
Subjt:  NFEVKLYDEVNSGKKLQSSISSRMKRKFSVLINTEGSL

TrEMBL top hitse value%identityAlignment
A0A5A7SMQ5 Retrotransposon gag protein4.6e-3165.6Show/hide
Query:  EEVDNSKKSEQRTSVFDCIKPPTTRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSDQPKRKMDNFEVKLYDEVNSG
        EEVDNS + +QRTSVFD IKP TTR S FQR+SMA  EEENQC  ST  R SAF+RLS+STSKK RPSTS FDRLK+T+DQ +R+M + + K + E N  
Subjt:  EEVDNSKKSEQRTSVFDCIKPPTTRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSDQPKRKMDNFEVKLYDEVNSG

Query:  KKLQSSISSRMKRKFSVLINTEGSL
         K++S +SSRMKRK SV INTEGSL
Subjt:  KKLQSSISSRMKRKFSVLINTEGSL

A0A5A7SZJ7 Retrotransposon gag protein2.1e-3163.04Show/hide
Query:  EKENLATSYCIDVEEVDNSKKSEQRTSVFDCIKPPTTRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSDQPKRKMD
        E +N   SY    EEVDNS + +QRTSVFD IKP TTR  VFQR+SMA  EEENQC MST  R SAF+RLS+STSKK RPSTS FDRLK+T+DQ +R+M 
Subjt:  EKENLATSYCIDVEEVDNSKKSEQRTSVFDCIKPPTTRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSDQPKRKMD

Query:  NFEVKLYDEVNSGKKLQSSISSRMKRKFSVLINTEGSL
        +F+ K + E N   K+ S + SRMKRK SV INTEGSL
Subjt:  NFEVKLYDEVNSGKKLQSSISSRMKRKFSVLINTEGSL

A0A5A7TQ06 Retrotransposon gag protein7.9e-3165.6Show/hide
Query:  EEVDNSKKSEQRTSVFDCIKPPTTRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSDQPKRKMDNFEVKLYDEVNSG
        EEVDNS + +QRTSVFD IKP TTR SVFQR+SMA  EEENQC  ST  R SAF+RLS+STSKK RPSTS FDRLK+T+DQ +R+M + + K + E N  
Subjt:  EEVDNSKKSEQRTSVFDCIKPPTTRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSDQPKRKMDNFEVKLYDEVNSG

Query:  KKLQSSISSRMKRKFSVLINTEGSL
         K+ S + SRMKRK SV INTEGSL
Subjt:  KKLQSSISSRMKRKFSVLINTEGSL

A0A5A7U974 Retrotransposon gag protein1.4e-3061.59Show/hide
Query:  EKENLATSYCIDVEEVDNSKKSEQRTSVFDCIKPPTTRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSDQPKRKMD
        E +N   SY    EEVDNS + +QRTSVFD IKP TTR SVFQR+SMA  EEENQC MST TR SAF+RLS+S SKK RPSTS FDRLK+T+DQ +R+M 
Subjt:  EKENLATSYCIDVEEVDNSKKSEQRTSVFDCIKPPTTRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSDQPKRKMD

Query:  NFEVKLYDEVNSGKKLQSSISSRMKRKFSVLINTEGSL
        + + K + E N   K+ S + SR+KRK S+ INTEGSL
Subjt:  NFEVKLYDEVNSGKKLQSSISSRMKRKFSVLINTEGSL

A0A5D3D209 Retrotransposon gag protein1.0e-3062.32Show/hide
Query:  EKENLATSYCIDVEEVDNSKKSEQRTSVFDCIKPPTTRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSDQPKRKMD
        E +N   SY    EEVDNS + +QRTSVFD IKP TTR  VFQR+SMA  EEENQC  ST  R SAF+RLS+STSKK RPSTS FDRLK+T++Q KR+M 
Subjt:  EKENLATSYCIDVEEVDNSKKSEQRTSVFDCIKPPTTRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSDQPKRKMD

Query:  NFEVKLYDEVNSGKKLQSSISSRMKRKFSVLINTEGSL
        +F+ K + E N   K+ S + SRMKRK SV INTEGSL
Subjt:  NFEVKLYDEVNSGKKLQSSISSRMKRKFSVLINTEGSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGAATAAATCCTTCTCCAAAACTTTCCACAAAAAGGAAAAAGAGAATCTTGCAACTTCCTACTGCATCGACGTAGAAGAAGTTGACAATTCCAAGAAAAGTGAACA
AAGGACTTCCGTCTTCGATTGCATCAAGCCTCCAACTACTCGTCCTTCGGTATTCCAAAGAATGAGTATGGCCGCGACAGAGGAAGAAAATCAATGTTCGATGTCCACCT
CCACTCGACCTTCAGCTTTCCAAAGGCTAAGTGTCTCCACATCAAAGAAAAGTCGACCTTCAACATCTGTTTTTGATCGCCTCAAAGTAACAAGTGATCAACCTAAAAGA
AAGATGGATAACTTTGAGGTGAAACTTTACGATGAAGTAAACAGCGGCAAGAAGCTTCAAAGTAGCATCTCGTCACGTATGAAGAGGAAGTTCTCTGTTCTCATAAATAC
AGAAGGTTCCTTGAAGTTCGAAGGTTCTTCGTTGTATCCTGTTGCGTTGTTCCTTCTCCAAGTTCGAGGGTTCTCAGTTGTACGACTGCTACGTTGTTCCTCCTCCAAGT
GCGAAGGATCTTATGTGGTGCACTGTTGCATTGTTCCCTCTACTCTCAAGTTTGATAGTTCTCACGCAGCTTCGCTGGAGTTCCTTCTCCCCAAGTTCGAAGGTTCTCAC
ATCCCTTCGGAGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACATCCCTTCGGAGCAGTTCCTTCCTCCAAGTTCGAAGGTCCTCACGCCGCTTCGCTGCAGTTCCTTC
CTCCAAGTTCGAGGGTTCTCACGCGCTTTGCTGCATTCCTTCCTCCAAGTTCGAGGTTCTCACGCGCTTCGCTGCAGTTCCTCCTCCAAGTTCGAGGTTCTCACGCGCTT
CGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTCCTGACGCCGCTTCGCTCCAGTTCCTTCCTCCAAGTTCGAGGGGTTCTCACGCGCTTTTTGCCGCACTTCGTTGCAGTT
CTTTCTCCCCAAGTTCGAAGGTTCTCACATCCCTTCGGAGCAGTTCCTTCCTCAAAGTTCGAAGGTTCTCACATCCCTTCGGAGCAGTTCCTTACTCCAAGTTCGAAGGT
TCTCACGCGCTTTGCTGCAGTTCCTCCAAGTTCGAGGTTCTCACGCGCTTCGCTGCAGTTCCTCCTCCAAGTTCGAGGTTCTCACGCGCTTCGCTGCAGTTCCTCCTCCA
AGTTCGAGGTTCTTACGCGCTTCGCTGCAGTTCCTCCTCCAAGTTCGAGGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCTCCAAGTTCGAGGGTTCTCACGCGCTTCGC
TGCAGTTCCTTCCTCCAAGTTCGAAGGTCACGTTTCACACGTCGCTTCGCTGCGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCCGCTTCGCTGCAGTTCCTTCCTCCA
AGTTCGCTTCGCTGTTGCAGTTTCTCCCAAGTCTGAAAGAGGAGGCCACCATTCATTCAGAGGGGAGATTCCGGCAGAGTCCAGAGAATTCTGCCAGAGTCCAGAGTCAT
CAGAAGTCAGAGAGTCTAGAGAATTTAGAAGATCCAAGATTCAAAATTCAACCAACTCAAGACTCAGAAGATCATCAAGCCAATCGACCGATCAAGAAGATCAACAAGTC
AGCAGACCGATCATCCAAGAAGATCAACAAACTAACAGGCCGATCATCCAAGAAGATCAACAAGCCAACAGGTCGATCATCCAAGAAGATCAACAAGTCAGCAGACCGAT
CATCAAACCGATCATCCGAGAAGATCAACAAGTCAGCAGACCGATCATCCAAGAAGATCAACAAGCCAACAGGCCAATCATCCAAGAAGATCAACAAGTCACAACAGGCC
GATCCAAGAGATCATTAAGCCAGCAGGCCGATCATCCAAGAAGATCATCAAGCCAACAGGCCGATCCAAGAGATCATCAACCTAGCAAGCCGATCATCCAAGAAGCTCAA
CAAGCCAACAGGCCGATCATCCAAGAAGATCATCAAGCCAATAGGCCGATCCAAGAGATCATCAACCTAGCAAGCCAATCATCCAAGAAGCTCAACAAACCAGCCCAAGA
AGATCAACAAGCTAGAGACCAAAGTTTATATATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTGAATAAATCCTTCTCCAAAACTTTCCACAAAAAGGAAAAAGAGAATCTTGCAACTTCCTACTGCATCGACGTAGAAGAAGTTGACAATTCCAAGAAAAGTGAACA
AAGGACTTCCGTCTTCGATTGCATCAAGCCTCCAACTACTCGTCCTTCGGTATTCCAAAGAATGAGTATGGCCGCGACAGAGGAAGAAAATCAATGTTCGATGTCCACCT
CCACTCGACCTTCAGCTTTCCAAAGGCTAAGTGTCTCCACATCAAAGAAAAGTCGACCTTCAACATCTGTTTTTGATCGCCTCAAAGTAACAAGTGATCAACCTAAAAGA
AAGATGGATAACTTTGAGGTGAAACTTTACGATGAAGTAAACAGCGGCAAGAAGCTTCAAAGTAGCATCTCGTCACGTATGAAGAGGAAGTTCTCTGTTCTCATAAATAC
AGAAGGTTCCTTGAAGTTCGAAGGTTCTTCGTTGTATCCTGTTGCGTTGTTCCTTCTCCAAGTTCGAGGGTTCTCAGTTGTACGACTGCTACGTTGTTCCTCCTCCAAGT
GCGAAGGATCTTATGTGGTGCACTGTTGCATTGTTCCCTCTACTCTCAAGTTTGATAGTTCTCACGCAGCTTCGCTGGAGTTCCTTCTCCCCAAGTTCGAAGGTTCTCAC
ATCCCTTCGGAGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACATCCCTTCGGAGCAGTTCCTTCCTCCAAGTTCGAAGGTCCTCACGCCGCTTCGCTGCAGTTCCTTC
CTCCAAGTTCGAGGGTTCTCACGCGCTTTGCTGCATTCCTTCCTCCAAGTTCGAGGTTCTCACGCGCTTCGCTGCAGTTCCTCCTCCAAGTTCGAGGTTCTCACGCGCTT
CGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTCCTGACGCCGCTTCGCTCCAGTTCCTTCCTCCAAGTTCGAGGGGTTCTCACGCGCTTTTTGCCGCACTTCGTTGCAGTT
CTTTCTCCCCAAGTTCGAAGGTTCTCACATCCCTTCGGAGCAGTTCCTTCCTCAAAGTTCGAAGGTTCTCACATCCCTTCGGAGCAGTTCCTTACTCCAAGTTCGAAGGT
TCTCACGCGCTTTGCTGCAGTTCCTCCAAGTTCGAGGTTCTCACGCGCTTCGCTGCAGTTCCTCCTCCAAGTTCGAGGTTCTCACGCGCTTCGCTGCAGTTCCTCCTCCA
AGTTCGAGGTTCTTACGCGCTTCGCTGCAGTTCCTCCTCCAAGTTCGAGGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCTCCAAGTTCGAGGGTTCTCACGCGCTTCGC
TGCAGTTCCTTCCTCCAAGTTCGAAGGTCACGTTTCACACGTCGCTTCGCTGCGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCCGCTTCGCTGCAGTTCCTTCCTCCA
AGTTCGCTTCGCTGTTGCAGTTTCTCCCAAGTCTGAAAGAGGAGGCCACCATTCATTCAGAGGGGAGATTCCGGCAGAGTCCAGAGAATTCTGCCAGAGTCCAGAGTCAT
CAGAAGTCAGAGAGTCTAGAGAATTTAGAAGATCCAAGATTCAAAATTCAACCAACTCAAGACTCAGAAGATCATCAAGCCAATCGACCGATCAAGAAGATCAACAAGTC
AGCAGACCGATCATCCAAGAAGATCAACAAACTAACAGGCCGATCATCCAAGAAGATCAACAAGCCAACAGGTCGATCATCCAAGAAGATCAACAAGTCAGCAGACCGAT
CATCAAACCGATCATCCGAGAAGATCAACAAGTCAGCAGACCGATCATCCAAGAAGATCAACAAGCCAACAGGCCAATCATCCAAGAAGATCAACAAGTCACAACAGGCC
GATCCAAGAGATCATTAAGCCAGCAGGCCGATCATCCAAGAAGATCATCAAGCCAACAGGCCGATCCAAGAGATCATCAACCTAGCAAGCCGATCATCCAAGAAGCTCAA
CAAGCCAACAGGCCGATCATCCAAGAAGATCATCAAGCCAATAGGCCGATCCAAGAGATCATCAACCTAGCAAGCCAATCATCCAAGAAGCTCAACAAACCAGCCCAAGA
AGATCAACAAGCTAGAGACCAAAGTTTATATATTTAA
Protein sequenceShow/hide protein sequence
MLNKSFSKTFHKKEKENLATSYCIDVEEVDNSKKSEQRTSVFDCIKPPTTRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRPSTSVFDRLKVTSDQPKR
KMDNFEVKLYDEVNSGKKLQSSISSRMKRKFSVLINTEGSLKFEGSSLYPVALFLLQVRGFSVVRLLRCSSSKCEGSYVVHCCIVPSTLKFDSSHAASLEFLLPKFEGSH
IPSEQFLPPSSKVLTSLRSSSFLQVRRSSRRFAAVPSSKFEGSHALCCIPSSKFEVLTRFAAVPPPSSRFSRASLQFLPPSSKVLTPLRSSSFLQVRGVLTRFLPHFVAV
LSPQVRRFSHPFGAVPSSKFEGSHIPSEQFLTPSSKVLTRFAAVPPSSRFSRASLQFLLQVRGSHALRCSSSSKFEVLTRFAAVPPPSSRVLTRFAAVPSSKFEGSHALR
CSSFLQVRRSRFTRRFAAFLPPSSKVLTPLRCSSFLQVRFAVAVSPKSERGGHHSFRGEIPAESREFCQSPESSEVRESREFRRSKIQNSTNSRLRRSSSQSTDQEDQQV
SRPIIQEDQQTNRPIIQEDQQANRSIIQEDQQVSRPIIKPIIREDQQVSRPIIQEDQQANRPIIQEDQQVTTGRSKRSLSQQADHPRRSSSQQADPRDHQPSKPIIQEAQ
QANRPIIQEDHQANRPIQEIINLASQSSKKLNKPAQEDQQARDQSLYI