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Lag0008384 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0008384
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionGirdin-like
Genome locationchr9:19778905..19781309
RNA-Seq ExpressionLag0008384
SyntenyLag0008384
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036933.1 uncharacterized protein E6C27_scaffold86G00060 [Cucumis melo var. makuwa]7.7e-4469.67Show/hide
Query:  MLSIPKKEEDIIYCFNPKLTTKRTLSEFLTNVHAADIQKHMRTKGEEENISMDYLIKITQAHLDEDKGLTLFALCNHGAVLFPKAKGYVDGKVTKLFFDI
        MLS+P+KE +I+Y FNPK TTKRTLS+FL  VHA +IQK+++ KG EEN+  DYLIK+TQ ++DEDKGLTL ALC +GAV+FPKA+GYVD KV KLFF +
Subjt:  MLSIPKKEEDIIYCFNPKLTTKRTLSEFLTNVHAADIQKHMRTKGEEENISMDYLIKITQAHLDEDKGLTLFALCNHGAVLFPKAKGYVDGKVTKLFFDI

Query:  ERGANPVIPLLGETFRSLNYCR
        ERG NP+IP+L ETFRSLNYCR
Subjt:  ERGANPVIPLLGETFRSLNYCR

KAA0036941.1 girdin-like [Cucumis melo var. makuwa]7.7e-4469.67Show/hide
Query:  MLSIPKKEEDIIYCFNPKLTTKRTLSEFLTNVHAADIQKHMRTKGEEENISMDYLIKITQAHLDEDKGLTLFALCNHGAVLFPKAKGYVDGKVTKLFFDI
        MLS+P+KE +I+Y FNPK TTKRTLS+FL  VHA +IQK+++ KG EEN+  DYLIK+TQ ++DEDKGLTL ALC +GAV+FPKA+GYVD KV KLFF +
Subjt:  MLSIPKKEEDIIYCFNPKLTTKRTLSEFLTNVHAADIQKHMRTKGEEENISMDYLIKITQAHLDEDKGLTLFALCNHGAVLFPKAKGYVDGKVTKLFFDI

Query:  ERGANPVIPLLGETFRSLNYCR
        ERG NP+IP+L ETFRSLNYCR
Subjt:  ERGANPVIPLLGETFRSLNYCR

KAA0036949.1 girdin-like [Cucumis melo var. makuwa]7.7e-4469.67Show/hide
Query:  MLSIPKKEEDIIYCFNPKLTTKRTLSEFLTNVHAADIQKHMRTKGEEENISMDYLIKITQAHLDEDKGLTLFALCNHGAVLFPKAKGYVDGKVTKLFFDI
        MLS+P+KE +I+Y FNPK TTKRTLS+FL  VHA +IQK+++ KG EEN+  DYLIK+TQ ++DEDKGLTL ALC +GAV+FPKA+GYVD KV KLFF +
Subjt:  MLSIPKKEEDIIYCFNPKLTTKRTLSEFLTNVHAADIQKHMRTKGEEENISMDYLIKITQAHLDEDKGLTLFALCNHGAVLFPKAKGYVDGKVTKLFFDI

Query:  ERGANPVIPLLGETFRSLNYCR
        ERG NP+IP+L ETFRSLNYCR
Subjt:  ERGANPVIPLLGETFRSLNYCR

KAA0056623.1 girdin-like [Cucumis melo var. makuwa]1.8e-3763.11Show/hide
Query:  MLSIPKKEEDIIYCFNPKLTTKRTLSEFLTNVHAADIQKHMRTKGEEENISMDYLIKITQAHLDEDKGLTLFALCNHGAVLFPKAKGYVDGKVTKLFFDI
        MLS+P+KE +I+Y FNPK TTK T           +IQK+++ KG EEN+  DYLIK+TQ ++DEDKGLTL ALC +GAV+FPKA+GYVDGKV KLFF++
Subjt:  MLSIPKKEEDIIYCFNPKLTTKRTLSEFLTNVHAADIQKHMRTKGEEENISMDYLIKITQAHLDEDKGLTLFALCNHGAVLFPKAKGYVDGKVTKLFFDI

Query:  ERGANPVIPLLGETFRSLNYCR
        ERG NP+IP+L +TFRSLNYCR
Subjt:  ERGANPVIPLLGETFRSLNYCR

KAA0060423.1 uncharacterized protein E6C27_scaffold22G002420 [Cucumis melo var. makuwa]3.1e-4571.31Show/hide
Query:  MLSIPKKEEDIIYCFNPKLTTKRTLSEFLTNVHAADIQKHMRTKGEEENISMDYLIKITQAHLDEDKGLTLFALCNHGAVLFPKAKGYVDGKVTKLFFDI
        MLS+P+KE +I+Y FNPK TTKRTLS+FL  VHAA+IQK+++ KG EEN+  DYLIK+TQ ++DEDKGLTL ALC +GAV+FPKA+GYVDGKV KLFF++
Subjt:  MLSIPKKEEDIIYCFNPKLTTKRTLSEFLTNVHAADIQKHMRTKGEEENISMDYLIKITQAHLDEDKGLTLFALCNHGAVLFPKAKGYVDGKVTKLFFDI

Query:  ERGANPVIPLLGETFRSLNYCR
        ERG NP+IP+L ETFRSLNYCR
Subjt:  ERGANPVIPLLGETFRSLNYCR

TrEMBL top hitse value%identityAlignment
A0A5A7T1W2 Retrotrans_gag domain-containing protein3.7e-4469.67Show/hide
Query:  MLSIPKKEEDIIYCFNPKLTTKRTLSEFLTNVHAADIQKHMRTKGEEENISMDYLIKITQAHLDEDKGLTLFALCNHGAVLFPKAKGYVDGKVTKLFFDI
        MLS+P+KE +I+Y FNPK TTKRTLS+FL  VHA +IQK+++ KG EEN+  DYLIK+TQ ++DEDKGLTL ALC +GAV+FPKA+GYVD KV KLFF +
Subjt:  MLSIPKKEEDIIYCFNPKLTTKRTLSEFLTNVHAADIQKHMRTKGEEENISMDYLIKITQAHLDEDKGLTLFALCNHGAVLFPKAKGYVDGKVTKLFFDI

Query:  ERGANPVIPLLGETFRSLNYCR
        ERG NP+IP+L ETFRSLNYCR
Subjt:  ERGANPVIPLLGETFRSLNYCR

A0A5A7T5S7 Girdin-like3.7e-4469.67Show/hide
Query:  MLSIPKKEEDIIYCFNPKLTTKRTLSEFLTNVHAADIQKHMRTKGEEENISMDYLIKITQAHLDEDKGLTLFALCNHGAVLFPKAKGYVDGKVTKLFFDI
        MLS+P+KE +I+Y FNPK TTKRTLS+FL  VHA +IQK+++ KG EEN+  DYLIK+TQ ++DEDKGLTL ALC +GAV+FPKA+GYVD KV KLFF +
Subjt:  MLSIPKKEEDIIYCFNPKLTTKRTLSEFLTNVHAADIQKHMRTKGEEENISMDYLIKITQAHLDEDKGLTLFALCNHGAVLFPKAKGYVDGKVTKLFFDI

Query:  ERGANPVIPLLGETFRSLNYCR
        ERG NP+IP+L ETFRSLNYCR
Subjt:  ERGANPVIPLLGETFRSLNYCR

A0A5A7T6E2 Girdin-like3.7e-4469.67Show/hide
Query:  MLSIPKKEEDIIYCFNPKLTTKRTLSEFLTNVHAADIQKHMRTKGEEENISMDYLIKITQAHLDEDKGLTLFALCNHGAVLFPKAKGYVDGKVTKLFFDI
        MLS+P+KE +I+Y FNPK TTKRTLS+FL  VHA +IQK+++ KG EEN+  DYLIK+TQ ++DEDKGLTL ALC +GAV+FPKA+GYVD KV KLFF +
Subjt:  MLSIPKKEEDIIYCFNPKLTTKRTLSEFLTNVHAADIQKHMRTKGEEENISMDYLIKITQAHLDEDKGLTLFALCNHGAVLFPKAKGYVDGKVTKLFFDI

Query:  ERGANPVIPLLGETFRSLNYCR
        ERG NP+IP+L ETFRSLNYCR
Subjt:  ERGANPVIPLLGETFRSLNYCR

A0A5A7UL51 Girdin-like8.9e-3863.11Show/hide
Query:  MLSIPKKEEDIIYCFNPKLTTKRTLSEFLTNVHAADIQKHMRTKGEEENISMDYLIKITQAHLDEDKGLTLFALCNHGAVLFPKAKGYVDGKVTKLFFDI
        MLS+P+KE +I+Y FNPK TTK T           +IQK+++ KG EEN+  DYLIK+TQ ++DEDKGLTL ALC +GAV+FPKA+GYVDGKV KLFF++
Subjt:  MLSIPKKEEDIIYCFNPKLTTKRTLSEFLTNVHAADIQKHMRTKGEEENISMDYLIKITQAHLDEDKGLTLFALCNHGAVLFPKAKGYVDGKVTKLFFDI

Query:  ERGANPVIPLLGETFRSLNYCR
        ERG NP+IP+L +TFRSLNYCR
Subjt:  ERGANPVIPLLGETFRSLNYCR

A0A5A7UWQ6 Uncharacterized protein1.5e-4571.31Show/hide
Query:  MLSIPKKEEDIIYCFNPKLTTKRTLSEFLTNVHAADIQKHMRTKGEEENISMDYLIKITQAHLDEDKGLTLFALCNHGAVLFPKAKGYVDGKVTKLFFDI
        MLS+P+KE +I+Y FNPK TTKRTLS+FL  VHAA+IQK+++ KG EEN+  DYLIK+TQ ++DEDKGLTL ALC +GAV+FPKA+GYVDGKV KLFF++
Subjt:  MLSIPKKEEDIIYCFNPKLTTKRTLSEFLTNVHAADIQKHMRTKGEEENISMDYLIKITQAHLDEDKGLTLFALCNHGAVLFPKAKGYVDGKVTKLFFDI

Query:  ERGANPVIPLLGETFRSLNYCR
        ERG NP+IP+L ETFRSLNYCR
Subjt:  ERGANPVIPLLGETFRSLNYCR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTAAGCATCCCTAAGAAGGAGGAAGACATAATTTATTGTTTCAACCCCAAGTTAACAACAAAAAGGACTTTATCAGAGTTTTTGACAAACGTCCACGCTGCTGATAT
TCAAAAGCACATGAGGACTAAAGGGGAAGAAGAAAACATATCGATGGATTATTTAATAAAGATCACTCAAGCCCACCTGGACGAGGATAAGGGCTTGACCTTATTTGCAT
TATGCAATCATGGAGCAGTGTTATTCCCTAAAGCAAAAGGATATGTCGATGGGAAAGTGACAAAACTGTTCTTTGACATAGAACGAGGAGCCAATCCGGTTATACCATTA
TTAGGAGAAACTTTTCGATCTCTCAACTACTGCAGAATAAGAGAAAAATGTCAGGCGGTCAATGAATGGAAATCTGTGAGGAAGGAGAAAAGTAAAGGGCATCATGAAGG
GGTTACTGGGGTTGTAGAAGCAGCACAGACAAGCAATCCAATCCAAGAAATCGATGATCCTGCTTATCTACTAGGATTTACTCCTCAACATGTACGACAACGCCTGCATT
TTCCACAACCACAAACCCCCCAACAATATGTTGCTTCGAATCCACTCTACACTCCTGTTCCAGATATGGAACAATTGGAAGTTCAAGCTGGAACTCAAATCAATAATATG
ACAATGTCTGGTCAACAATCGGAGATGAGACAACATGAGAGCGTTCAAGCTAAGGAAAAGTTGGAGGTTCTAGAAGAAAGGTTATGA
mRNA sequenceShow/hide mRNA sequence
ATGCTAAGCATCCCTAAGAAGGAGGAAGACATAATTTATTGTTTCAACCCCAAGTTAACAACAAAAAGGACTTTATCAGAGTTTTTGACAAACGTCCACGCTGCTGATAT
TCAAAAGCACATGAGGACTAAAGGGGAAGAAGAAAACATATCGATGGATTATTTAATAAAGATCACTCAAGCCCACCTGGACGAGGATAAGGGCTTGACCTTATTTGCAT
TATGCAATCATGGAGCAGTGTTATTCCCTAAAGCAAAAGGATATGTCGATGGGAAAGTGACAAAACTGTTCTTTGACATAGAACGAGGAGCCAATCCGGTTATACCATTA
TTAGGAGAAACTTTTCGATCTCTCAACTACTGCAGAATAAGAGAAAAATGTCAGGCGGTCAATGAATGGAAATCTGTGAGGAAGGAGAAAAGTAAAGGGCATCATGAAGG
GGTTACTGGGGTTGTAGAAGCAGCACAGACAAGCAATCCAATCCAAGAAATCGATGATCCTGCTTATCTACTAGGATTTACTCCTCAACATGTACGACAACGCCTGCATT
TTCCACAACCACAAACCCCCCAACAATATGTTGCTTCGAATCCACTCTACACTCCTGTTCCAGATATGGAACAATTGGAAGTTCAAGCTGGAACTCAAATCAATAATATG
ACAATGTCTGGTCAACAATCGGAGATGAGACAACATGAGAGCGTTCAAGCTAAGGAAAAGTTGGAGGTTCTAGAAGAAAGGTTATGA
Protein sequenceShow/hide protein sequence
MLSIPKKEEDIIYCFNPKLTTKRTLSEFLTNVHAADIQKHMRTKGEEENISMDYLIKITQAHLDEDKGLTLFALCNHGAVLFPKAKGYVDGKVTKLFFDIERGANPVIPL
LGETFRSLNYCRIREKCQAVNEWKSVRKEKSKGHHEGVTGVVEAAQTSNPIQEIDDPAYLLGFTPQHVRQRLHFPQPQTPQQYVASNPLYTPVPDMEQLEVQAGTQINNM
TMSGQQSEMRQHESVQAKEKLEVLEERL