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Lag0008390 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0008390
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr9:20082352..20083219
RNA-Seq ExpressionLag0008390
SyntenyLag0008390
Gene Ontology termsGO:0016740 - transferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037445.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]3.6e-1248.68Show/hide
Query:  MKGYIIKPDFKKAYNKVDRAFLDAVMEQKVFNNRWRKWIQGRLTNTIFSTMINRRPRGKSFASRGLRQGDCYPLFP
        +KG+I+K D +KA++ ++  F+D V+E+K F N WRKWI+G ++N  +S ++N RP+G+  A+RGLRQGD  PL P
Subjt:  MKGYIIKPDFKKAYNKVDRAFLDAVMEQKVFNNRWRKWIQGRLTNTIFSTMINRRPRGKSFASRGLRQGDCYPLFP

PRQ36601.1 putative RNA-directed DNA polymerase [Rosa chinensis]1.6e-1259.42Show/hide
Query:  KGYIIKPDFKKAYNKVDRAFLDAVMEQKVFNNRWRKWIQGRLTNTIFSTMINRRPRGKSFASRGLRQGD
        +G + K DF+KAY+ V+  FLD  ME K F +RWRKWI G L +  FS  IN RPRGK  ASRGLRQGD
Subjt:  KGYIIKPDFKKAYNKVDRAFLDAVMEQKVFNNRWRKWIQGRLTNTIFSTMINRRPRGKSFASRGLRQGD

TYJ99315.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]2.1e-1250Show/hide
Query:  MKGYIIKPDFKKAYNKVDRAFLDAVMEQKVFNNRWRKWIQGRLTNTIFSTMINRRPRGKSFASRGLRQGDCYPLFP
        +KG+I+K D +KA++ ++  F+D V+E+K F N WRKWI+G ++N  +S +IN RP+G+  A+RGLRQGD  PL P
Subjt:  MKGYIIKPDFKKAYNKVDRAFLDAVMEQKVFNNRWRKWIQGRLTNTIFSTMINRRPRGKSFASRGLRQGDCYPLFP

XP_009335445.1 PREDICTED: uncharacterized protein LOC103928158 [Pyrus x bretschneideri]1.2e-1253.33Show/hide
Query:  KGYIIKPDFKKAYNKVDRAFLDAVMEQKVFNNRWRKWIQGRLTNTIFSTMINRRPRGKSFASRGLRQGDCYPLFP
        +G + K DF+KAY+ V+  FLD ++++K F NRWRKW+QG   +  FS +IN RP+GK  ASR LRQGD  PL P
Subjt:  KGYIIKPDFKKAYNKVDRAFLDAVMEQKVFNNRWRKWIQGRLTNTIFSTMINRRPRGKSFASRGLRQGDCYPLFP

XP_022132189.1 uncharacterized protein LOC111005109 [Momordica charantia]2.8e-1258.82Show/hide
Query:  KGYIIKPDFKKAYNKVDRAFLDAVMEQKVFNNRWRKWIQGRLTNTIFSTMINRRPRGKSFASRGLRQG
        KG +IK D +KA++KVD  FLD V+  K F + WRKWI G ++ T FS +IN RPRGK  ASRGLRQG
Subjt:  KGYIIKPDFKKAYNKVDRAFLDAVMEQKVFNNRWRKWIQGRLTNTIFSTMINRRPRGKSFASRGLRQG

TrEMBL top hitse value%identityAlignment
A0A2P6QQZ3 Putative RNA-directed DNA polymerase7.9e-1359.42Show/hide
Query:  KGYIIKPDFKKAYNKVDRAFLDAVMEQKVFNNRWRKWIQGRLTNTIFSTMINRRPRGKSFASRGLRQGD
        +G + K DF+KAY+ V+  FLD  ME K F +RWRKWI G L +  FS  IN RPRGK  ASRGLRQGD
Subjt:  KGYIIKPDFKKAYNKVDRAFLDAVMEQKVFNNRWRKWIQGRLTNTIFSTMINRRPRGKSFASRGLRQGD

A0A803P8A0 Uncharacterized protein1.1e-1456Show/hide
Query:  KGYIIKPDFKKAYNKVDRAFLDAVMEQKVFNNRWRKWIQGRLTNTIFSTMINRRPRGKSFASRGLRQGDCYPLFP
        KG+++K DF+KAY++VD  FLD V+ +K F  RWRKWI+G +++T FS  +N R RGK   SRGLRQGD  PL P
Subjt:  KGYIIKPDFKKAYNKVDRAFLDAVMEQKVFNNRWRKWIQGRLTNTIFSTMINRRPRGKSFASRGLRQGDCYPLFP

A0A803PZR9 Uncharacterized protein5.5e-1458.11Show/hide
Query:  GYIIKPDFKKAYNKVDRAFLDAVMEQKVFNNRWRKWIQGRLTNTIFSTMINRRPRGKSFASRGLRQGDCYPLFP
        G + K DF+KAY++V+  FLD VM +K F + WRKWI+G L+ T FS  +N RPRGK  ASRGLRQGD  PL P
Subjt:  GYIIKPDFKKAYNKVDRAFLDAVMEQKVFNNRWRKWIQGRLTNTIFSTMINRRPRGKSFASRGLRQGDCYPLFP

A0A803QEA6 Uncharacterized protein1.4e-1457.33Show/hide
Query:  KGYIIKPDFKKAYNKVDRAFLDAVMEQKVFNNRWRKWIQGRLTNTIFSTMINRRPRGKSFASRGLRQGDCYPLFP
        KG+++K DF+KAY++VD  FLD V+ +K F  RWRKWI+G +++T FS  IN R RGK   SRGLRQGD  PL P
Subjt:  KGYIIKPDFKKAYNKVDRAFLDAVMEQKVFNNRWRKWIQGRLTNTIFSTMINRRPRGKSFASRGLRQGDCYPLFP

A0A803QI00 Uncharacterized protein6.0e-1354.67Show/hide
Query:  KGYIIKPDFKKAYNKVDRAFLDAVMEQKVFNNRWRKWIQGRLTNTIFSTMINRRPRGKSFASRGLRQGDCYPLFP
        KG++ K D +KAY++VD  FLD V+++K F   WRKWI+G +++T FS +IN R RGK   SRGLRQGD  PL P
Subjt:  KGYIIKPDFKKAYNKVDRAFLDAVMEQKVFNNRWRKWIQGRLTNTIFSTMINRRPRGKSFASRGLRQGDCYPLFP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGCGGAAGCTTCTTCTCAACAGAACTTTGACAGTTGCTTGCAGACGGTTGAGGCGTCAGTAGAAGAAATTCGCAAGGAAAGAGTGGCAGTGAATGCAAGAAACCT
TCAAGAAAACCAAGAAGCTATTGTTGTACCACCTACGAGACTTGGTCCTGTCAAAATTTGTAGGCCTCATGAGATTTGTATGCCCGGTTATATGAAAGGGTACATCATAA
AACCTGACTTCAAGAAAGCATACAACAAAGTTGATAGGGCTTTCTTAGATGCGGTAATGGAGCAAAAGGTGTTCAACAATAGATGGAGGAAATGGATTCAAGGCCGTCTT
ACTAATACAATCTTCTCCACTATGATAAACAGAAGACCTAGAGGGAAGTCTTTTGCTTCGAGAGGGTTGAGACAAGGGGACTGCTATCCCCTTTTTCCTTCGGGCTACAG
GGAGACCGTTTTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGCGGAAGCTTCTTCTCAACAGAACTTTGACAGTTGCTTGCAGACGGTTGAGGCGTCAGTAGAAGAAATTCGCAAGGAAAGAGTGGCAGTGAATGCAAGAAACCT
TCAAGAAAACCAAGAAGCTATTGTTGTACCACCTACGAGACTTGGTCCTGTCAAAATTTGTAGGCCTCATGAGATTTGTATGCCCGGTTATATGAAAGGGTACATCATAA
AACCTGACTTCAAGAAAGCATACAACAAAGTTGATAGGGCTTTCTTAGATGCGGTAATGGAGCAAAAGGTGTTCAACAATAGATGGAGGAAATGGATTCAAGGCCGTCTT
ACTAATACAATCTTCTCCACTATGATAAACAGAAGACCTAGAGGGAAGTCTTTTGCTTCGAGAGGGTTGAGACAAGGGGACTGCTATCCCCTTTTTCCTTCGGGCTACAG
GGAGACCGTTTTGTGA
Protein sequenceShow/hide protein sequence
MEAEASSQQNFDSCLQTVEASVEEIRKERVAVNARNLQENQEAIVVPPTRLGPVKICRPHEICMPGYMKGYIIKPDFKKAYNKVDRAFLDAVMEQKVFNNRWRKWIQGRL
TNTIFSTMINRRPRGKSFASRGLRQGDCYPLFPSGYRETVL