; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0008401 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0008401
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr9:20356086..20356923
RNA-Seq ExpressionLag0008401
SyntenyLag0008401
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8695166.1 hypothetical protein F3Y22_tig00110733pilonHSYRG00282 [Hibiscus syriacus]2.6e-1531.75Show/hide
Query:  GVQWKESQTKVKSLVPSDLKLESVVWLHFIKNRLMPTTHDSTISVKRVMLLYSIMKGLEINIGSIIKEEILACGRKKAGKLFFGSLITQLCQRVKIVPGK
        G +W   Q K K++    L     +W HF+K++LMPT+H++T+S +R++LL+SI+ G  I+IG II E    C +++A  L F +LIT LC++ K+    
Subjt:  GVQWKESQTKVKSLVPSDLKLESVVWLHFIKNRLMPTTHDSTISVKRVMLLYSIMKGLEINIGSIIKEEILACGRKKAGKLFFGSLITQLCQRVKIVPGK

Query:  DEERHFFRPTINLSLIGKL--QQNNTQRKDKSSTSQATPSSGLNSASPPQHTPFSGPSPSFEALEIAYQQLDQIRDNLRTYWAYAKERD
         +E       +N + I  L   +    +K +++TS+   S  + ++S              +A++  +Q + Q+ D L  Y+AYAK RD
Subjt:  DEERHFFRPTINLSLIGKL--QQNNTQRKDKSSTSQATPSSGLNSASPPQHTPFSGPSPSFEALEIAYQQLDQIRDNLRTYWAYAKERD

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]2.5e-1830.25Show/hide
Query:  GVQWKESQTKVKSLVPSDLKLESVVWLHFIKNRLMPTTHDSTISVKRVMLLYSIMKGLEINIGSIIKEEILACGRKKAGKLFFGSLITQLCQRVKIVPGK
        G +W  S     + + S L   + VW HF+K+RL+PTTH  T+S  R++LL+S++ G  IN+G +I  EI AC  +K G LFF SLIT+LC+  +     
Subjt:  GVQWKESQTKVKSLVPSDLKLESVVWLHFIKNRLMPTTHDSTISVKRVMLLYSIMKGLEINIGSIIKEEILACGRKKAGKLFFGSLITQLCQRVKIVPGK

Query:  DEERHFFRPTINLSLIGKLQQN--NTQRKDKSSTSQATPSSGLNSASPPQHTPFSGPSPSFEALEIAYQQ--LDQIRDNLRTYWAYAKERDEAIREFYLS
        +EE+      I+   + ++ Q       +  SS+  AT SS   +    Q         S + ++  +    L       + +WAY+KERD A+++   +
Subjt:  DEERHFFRPTINLSLIGKLQQN--NTQRKDKSSTSQATPSSGLNSASPPQHTPFSGPSPSFEALEIAYQQ--LDQIRDNLRTYWAYAKERDEAIREFYLS

Query:  IAPSIAPVLPDFPQSLLPQEEKDFDDEEEDGNEDEERE
              P  P FPQ +L   + +++ E +    +E  E
Subjt:  IAPSIAPVLPDFPQSLLPQEEKDFDDEEEDGNEDEERE

PON59596.1 hypothetical protein PanWU01x14_158080 [Parasponia andersonii]1.5e-1834.11Show/hide
Query:  VWLHFIKNRLMPTTHDSTISVKRVMLLYSIMKGLEINIGSIIKEEILACGRKKAGKLFFGSLITQLCQRVKIVPGKDEERHFFRPTINLSLIGKL-QQNN
        VW HF+K+RL+PTTH  T+S  R++LLYS++ G  IN+G +I  EI AC  +K+G LFF SLITQLC+  +     +EE+      I+   + ++ Q+  
Subjt:  VWLHFIKNRLMPTTHDSTISVKRVMLLYSIMKGLEINIGSIIKEEILACGRKKAGKLFFGSLITQLCQRVKIVPGKDEERHFFRPTINLSLIGKL-QQNN

Query:  TQRKDKSSTSQAT--PSSGLNSASPPQHTPFSGPSPSFEALEIAYQQLDQ-IRDNLRTYWAYAKERDEAIREFYLSIAPSIAPVLPDFPQSLLPQEEKDF
        T+   + STS+ T   SS  N     Q           E  +     L Q      + +WAY+KERD A+++   +      P  P FPQ LL   + ++
Subjt:  TQRKDKSSTSQAT--PSSGLNSASPPQHTPFSGPSPSFEALEIAYQQLDQ-IRDNLRTYWAYAKERDEAIREFYLSIAPSIAPVLPDFPQSLLPQEEKDF

Query:  DDEEEDGNEDEERE
        + E +    +E  E
Subjt:  DDEEEDGNEDEERE

PON70375.1 hypothetical protein PanWU01x14_080440 [Parasponia andersonii]2.0e-1542.31Show/hide
Query:  GVQWKESQTKVKSLVPSDLKLESVVWLHFIKNRLMPTTHDSTISVKRVMLLYSIMKGLEINIGSIIKEEILACGRKKAGKLFFGSLITQLCQRVKIVPGK
        G +W  S     + + S L   + VW HF+K+RL+PTTH  T+S + V LLYS++ G  IN+G +I  EI AC  +K+G LFF SLIT +C+  +     
Subjt:  GVQWKESQTKVKSLVPSDLKLESVVWLHFIKNRLMPTTHDSTISVKRVMLLYSIMKGLEINIGSIIKEEILACGRKKAGKLFFGSLITQLCQRVKIVPGK

Query:  DEER
        +EE+
Subjt:  DEER

PON78020.1 hypothetical protein PanWU01x14_023740 [Parasponia andersonii]1.8e-1932.05Show/hide
Query:  GVQWKESQTKVKSLVPSDLKLESVVWLHFIKNRLMPTTHDSTISVKRVMLLYSIMKGLEINIGSIIKEEILACGRKKAGKLFFGSLITQLCQRVKIVPGK
        G +W  S     + + S L   + VW HF+K+RL+PTTH   +S  R++LL+S++ G  IN+G +I  EI AC  +K G LFF SLIT+LC+    +   
Subjt:  GVQWKESQTKVKSLVPSDLKLESVVWLHFIKNRLMPTTHDSTISVKRVMLLYSIMKGLEINIGSIIKEEILACGRKKAGKLFFGSLITQLCQRVKIVPGK

Query:  DEERHFFRPTINLSLIGKLQQNNTQRKDKSSTSQATPSSGLNSASPPQHTPFSGPSPSFEALEIAYQQLDQIRDNLRTYWAYAKERDEAIREFYLSIAPS
        +EE+      I+   + ++    TQ     ST Q  PSS   +A+    T         +ALE    Q +      + +WAY+KERD A+++   +    
Subjt:  DEERHFFRPTINLSLIGKLQQNNTQRKDKSSTSQATPSSGLNSASPPQHTPFSGPSPSFEALEIAYQQLDQIRDNLRTYWAYAKERDEAIREFYLSIAPS

Query:  IAPVLPDFPQSLLPQEEKDFDDEEEDGNEDEERE
          P  P FPQ +L   + +++ E +    +E  E
Subjt:  IAPVLPDFPQSLLPQEEKDFDDEEEDGNEDEERE

TrEMBL top hitse value%identityAlignment
A0A2P5BCG4 Uncharacterized protein (Fragment)1.2e-1830.25Show/hide
Query:  GVQWKESQTKVKSLVPSDLKLESVVWLHFIKNRLMPTTHDSTISVKRVMLLYSIMKGLEINIGSIIKEEILACGRKKAGKLFFGSLITQLCQRVKIVPGK
        G +W  S     + + S L   + VW HF+K+RL+PTTH  T+S  R++LL+S++ G  IN+G +I  EI AC  +K G LFF SLIT+LC+  +     
Subjt:  GVQWKESQTKVKSLVPSDLKLESVVWLHFIKNRLMPTTHDSTISVKRVMLLYSIMKGLEINIGSIIKEEILACGRKKAGKLFFGSLITQLCQRVKIVPGK

Query:  DEERHFFRPTINLSLIGKLQQN--NTQRKDKSSTSQATPSSGLNSASPPQHTPFSGPSPSFEALEIAYQQ--LDQIRDNLRTYWAYAKERDEAIREFYLS
        +EE+      I+   + ++ Q       +  SS+  AT SS   +    Q         S + ++  +    L       + +WAY+KERD A+++   +
Subjt:  DEERHFFRPTINLSLIGKLQQN--NTQRKDKSSTSQATPSSGLNSASPPQHTPFSGPSPSFEALEIAYQQ--LDQIRDNLRTYWAYAKERDEAIREFYLS

Query:  IAPSIAPVLPDFPQSLLPQEEKDFDDEEEDGNEDEERE
              P  P FPQ +L   + +++ E +    +E  E
Subjt:  IAPSIAPVLPDFPQSLLPQEEKDFDDEEEDGNEDEERE

A0A2P5CEY2 Uncharacterized protein7.2e-1934.11Show/hide
Query:  VWLHFIKNRLMPTTHDSTISVKRVMLLYSIMKGLEINIGSIIKEEILACGRKKAGKLFFGSLITQLCQRVKIVPGKDEERHFFRPTINLSLIGKL-QQNN
        VW HF+K+RL+PTTH  T+S  R++LLYS++ G  IN+G +I  EI AC  +K+G LFF SLITQLC+  +     +EE+      I+   + ++ Q+  
Subjt:  VWLHFIKNRLMPTTHDSTISVKRVMLLYSIMKGLEINIGSIIKEEILACGRKKAGKLFFGSLITQLCQRVKIVPGKDEERHFFRPTINLSLIGKL-QQNN

Query:  TQRKDKSSTSQAT--PSSGLNSASPPQHTPFSGPSPSFEALEIAYQQLDQ-IRDNLRTYWAYAKERDEAIREFYLSIAPSIAPVLPDFPQSLLPQEEKDF
        T+   + STS+ T   SS  N     Q           E  +     L Q      + +WAY+KERD A+++   +      P  P FPQ LL   + ++
Subjt:  TQRKDKSSTSQAT--PSSGLNSASPPQHTPFSGPSPSFEALEIAYQQLDQ-IRDNLRTYWAYAKERDEAIREFYLSIAPSIAPVLPDFPQSLLPQEEKDF

Query:  DDEEEDGNEDEERE
        + E +    +E  E
Subjt:  DDEEEDGNEDEERE

A0A2P5DAQ2 Uncharacterized protein9.7e-1642.31Show/hide
Query:  GVQWKESQTKVKSLVPSDLKLESVVWLHFIKNRLMPTTHDSTISVKRVMLLYSIMKGLEINIGSIIKEEILACGRKKAGKLFFGSLITQLCQRVKIVPGK
        G +W  S     + + S L   + VW HF+K+RL+PTTH  T+S + V LLYS++ G  IN+G +I  EI AC  +K+G LFF SLIT +C+  +     
Subjt:  GVQWKESQTKVKSLVPSDLKLESVVWLHFIKNRLMPTTHDSTISVKRVMLLYSIMKGLEINIGSIIKEEILACGRKKAGKLFFGSLITQLCQRVKIVPGK

Query:  DEER
        +EE+
Subjt:  DEER

A0A2P5DXM3 Uncharacterized protein8.5e-2032.05Show/hide
Query:  GVQWKESQTKVKSLVPSDLKLESVVWLHFIKNRLMPTTHDSTISVKRVMLLYSIMKGLEINIGSIIKEEILACGRKKAGKLFFGSLITQLCQRVKIVPGK
        G +W  S     + + S L   + VW HF+K+RL+PTTH   +S  R++LL+S++ G  IN+G +I  EI AC  +K G LFF SLIT+LC+    +   
Subjt:  GVQWKESQTKVKSLVPSDLKLESVVWLHFIKNRLMPTTHDSTISVKRVMLLYSIMKGLEINIGSIIKEEILACGRKKAGKLFFGSLITQLCQRVKIVPGK

Query:  DEERHFFRPTINLSLIGKLQQNNTQRKDKSSTSQATPSSGLNSASPPQHTPFSGPSPSFEALEIAYQQLDQIRDNLRTYWAYAKERDEAIREFYLSIAPS
        +EE+      I+   + ++    TQ     ST Q  PSS   +A+    T         +ALE    Q +      + +WAY+KERD A+++   +    
Subjt:  DEERHFFRPTINLSLIGKLQQNNTQRKDKSSTSQATPSSGLNSASPPQHTPFSGPSPSFEALEIAYQQLDQIRDNLRTYWAYAKERDEAIREFYLSIAPS

Query:  IAPVLPDFPQSLLPQEEKDFDDEEEDGNEDEERE
          P  P FPQ +L   + +++ E +    +E  E
Subjt:  IAPVLPDFPQSLLPQEEKDFDDEEEDGNEDEERE

A0A6A2ZUE4 Uncharacterized protein1.3e-1531.75Show/hide
Query:  GVQWKESQTKVKSLVPSDLKLESVVWLHFIKNRLMPTTHDSTISVKRVMLLYSIMKGLEINIGSIIKEEILACGRKKAGKLFFGSLITQLCQRVKIVPGK
        G +W   Q K K++    L     +W HF+K++LMPT+H++T+S +R++LL+SI+ G  I+IG II E    C +++A  L F +LIT LC++ K+    
Subjt:  GVQWKESQTKVKSLVPSDLKLESVVWLHFIKNRLMPTTHDSTISVKRVMLLYSIMKGLEINIGSIIKEEILACGRKKAGKLFFGSLITQLCQRVKIVPGK

Query:  DEERHFFRPTINLSLIGKL--QQNNTQRKDKSSTSQATPSSGLNSASPPQHTPFSGPSPSFEALEIAYQQLDQIRDNLRTYWAYAKERD
         +E       +N + I  L   +    +K +++TS+   S  + ++S              +A++  +Q + Q+ D L  Y+AYAK RD
Subjt:  DEERHFFRPTINLSLIGKL--QQNNTQRKDKSSTSQATPSSGLNSASPPQHTPFSGPSPSFEALEIAYQQLDQIRDNLRTYWAYAKERD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCAGCTTCTCTTCTGTTGACATCAATCAGGGAGTTCAATGGAAAGAGTCCCAGACTAAGGTGAAGTCATTAGTGCCAAGCGACCTCAAGCTAGAATCGGTAGTGTG
GCTTCACTTTATCAAGAACAGGTTGATGCCAACAACCCATGATAGTACTATTTCAGTAAAGAGAGTTATGCTCCTCTACAGTATTATGAAGGGTTTAGAAATCAACATAG
GGAGCATCATCAAGGAGGAAATCCTGGCCTGTGGAAGGAAGAAAGCAGGGAAACTCTTCTTCGGGTCACTAATCACCCAACTTTGTCAGAGGGTGAAGATAGTTCCTGGT
AAGGATGAGGAGCGTCACTTCTTCAGGCCTACCATCAACCTATCCTTGATCGGGAAGCTTCAACAGAATAACACCCAAAGAAAAGACAAATCTTCCACATCTCAAGCCAC
TCCATCATCAGGGCTGAATTCGGCTTCTCCACCTCAACACACTCCTTTTTCAGGACCCTCACCATCATTTGAAGCCCTAGAAATTGCCTACCAACAACTAGATCAAATCA
GGGACAACCTGAGAACTTATTGGGCATATGCCAAGGAGAGAGATGAAGCCATTAGAGAGTTCTACCTATCTATCGCCCCGAGTATTGCTCCTGTCCTTCCTGATTTCCCT
CAATCGTTGCTACCTCAAGAAGAAAAGGATTTTGATGATGAAGAAGAAGATGGAAATGAAGATGAAGAAAGAGAGAGTTCCTCGGATGAGGACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTCAGCTTCTCTTCTGTTGACATCAATCAGGGAGTTCAATGGAAAGAGTCCCAGACTAAGGTGAAGTCATTAGTGCCAAGCGACCTCAAGCTAGAATCGGTAGTGTG
GCTTCACTTTATCAAGAACAGGTTGATGCCAACAACCCATGATAGTACTATTTCAGTAAAGAGAGTTATGCTCCTCTACAGTATTATGAAGGGTTTAGAAATCAACATAG
GGAGCATCATCAAGGAGGAAATCCTGGCCTGTGGAAGGAAGAAAGCAGGGAAACTCTTCTTCGGGTCACTAATCACCCAACTTTGTCAGAGGGTGAAGATAGTTCCTGGT
AAGGATGAGGAGCGTCACTTCTTCAGGCCTACCATCAACCTATCCTTGATCGGGAAGCTTCAACAGAATAACACCCAAAGAAAAGACAAATCTTCCACATCTCAAGCCAC
TCCATCATCAGGGCTGAATTCGGCTTCTCCACCTCAACACACTCCTTTTTCAGGACCCTCACCATCATTTGAAGCCCTAGAAATTGCCTACCAACAACTAGATCAAATCA
GGGACAACCTGAGAACTTATTGGGCATATGCCAAGGAGAGAGATGAAGCCATTAGAGAGTTCTACCTATCTATCGCCCCGAGTATTGCTCCTGTCCTTCCTGATTTCCCT
CAATCGTTGCTACCTCAAGAAGAAAAGGATTTTGATGATGAAGAAGAAGATGGAAATGAAGATGAAGAAAGAGAGAGTTCCTCGGATGAGGACTAG
Protein sequenceShow/hide protein sequence
MVSFSSVDINQGVQWKESQTKVKSLVPSDLKLESVVWLHFIKNRLMPTTHDSTISVKRVMLLYSIMKGLEINIGSIIKEEILACGRKKAGKLFFGSLITQLCQRVKIVPG
KDEERHFFRPTINLSLIGKLQQNNTQRKDKSSTSQATPSSGLNSASPPQHTPFSGPSPSFEALEIAYQQLDQIRDNLRTYWAYAKERDEAIREFYLSIAPSIAPVLPDFP
QSLLPQEEKDFDDEEEDGNEDEERESSSDED