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Lag0008412 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0008412
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionDEAD-box ATP-dependent RNA helicase 21
Genome locationchr9:20886131..20887049
RNA-Seq ExpressionLag0008412
SyntenyLag0008412
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF5191403.1 Dead-box atp-dependent rna helicase [Thalictrum thalictroides]7.5e-0993.94Show/hide
Query:  MLIQSNSPVPPELARHEASKFKPGSIPDRPPRH
        MLIQSNSPVPPELARHEAS+FKPG+IPDRPPRH
Subjt:  MLIQSNSPVPPELARHEASKFKPGSIPDRPPRH
PRQ46880.1 putative RNA helicase [Rosa chinensis]7.5e-0993.94Show/hide
Query:  MLIQSNSPVPPELARHEASKFKPGSIPDRPPRH
        MLIQSNSPVPPELARHEASK+KPG+IPDRPPRH
Subjt:  MLIQSNSPVPPELARHEASKFKPGSIPDRPPRH
XP_029119289.1 DEAD-box ATP-dependent RNA helicase 21-like [Elaeis guineensis]1.3e-08100Show/hide
Query:  MLIQSNSPVPPELARHEASKFKPGSIPDRPPR
        MLIQSNSPVPPELARHEASKFKPGSIPDRPPR
Subjt:  MLIQSNSPVPPELARHEASKFKPGSIPDRPPR
XP_030461821.1 DEAD-box ATP-dependent RNA helicase 21 [Syzygium oleosum]1.3e-08100Show/hide
Query:  MLIQSNSPVPPELARHEASKFKPGSIPDRPPR
        MLIQSNSPVPPELARHEASKFKPGSIPDRPPR
Subjt:  MLIQSNSPVPPELARHEASKFKPGSIPDRPPR
XP_042406266.1 DEAD-box ATP-dependent RNA helicase 21-like [Zingiber officinale]1.3e-08100Show/hide
Query:  MLIQSNSPVPPELARHEASKFKPGSIPDRPPR
        MLIQSNSPVPPELARHEASKFKPGSIPDRPPR
Subjt:  MLIQSNSPVPPELARHEASKFKPGSIPDRPPR
TrEMBL top hitse value%identityAlignment
A0A072UUE3 DEAD-box ATP-dependent RNA helicase6.2e-09100Show/hide
Query:  MLIQSNSPVPPELARHEASKFKPGSIPDRPPR
        MLIQSNSPVPPELARHEASKFKPGSIPDRPPR
Subjt:  MLIQSNSPVPPELARHEASKFKPGSIPDRPPR
A0A1B6QIK6 Uncharacterized protein6.2e-09100Show/hide
Query:  MLIQSNSPVPPELARHEASKFKPGSIPDRPPR
        MLIQSNSPVPPELARHEASKFKPGSIPDRPPR
Subjt:  MLIQSNSPVPPELARHEASKFKPGSIPDRPPR
A0A2P6RKC4 Putative RNA helicase3.6e-0993.94Show/hide
Query:  MLIQSNSPVPPELARHEASKFKPGSIPDRPPRH
        MLIQSNSPVPPELARHEASK+KPG+IPDRPPRH
Subjt:  MLIQSNSPVPPELARHEASKFKPGSIPDRPPRH
A0A7J6W2S7 Dead-box atp-dependent rna helicase3.6e-0993.94Show/hide
Query:  MLIQSNSPVPPELARHEASKFKPGSIPDRPPRH
        MLIQSNSPVPPELARHEAS+FKPG+IPDRPPRH
Subjt:  MLIQSNSPVPPELARHEASKFKPGSIPDRPPRH
K4A698 Uncharacterized protein6.2e-09100Show/hide
Query:  MLIQSNSPVPPELARHEASKFKPGSIPDRPPR
        MLIQSNSPVPPELARHEASKFKPGSIPDRPPR
Subjt:  MLIQSNSPVPPELARHEASKFKPGSIPDRPPR
SwissProt top hitse value%identityAlignment
P93008 DEAD-box ATP-dependent RNA helicase 211.4e-1084.85Show/hide
Query:  MLIQSNSPVPPELARHEASKFKPGSIPDRPPRH
        ML+QSNS VPPELARHEAS+FKPG++PDRPPRH
Subjt:  MLIQSNSPVPPELARHEASKFKPGSIPDRPPRH
Q53RK8 DEAD-box ATP-dependent RNA helicase 212.2e-1196.88Show/hide
Query:  MLIQSNSPVPPELARHEASKFKPGSIPDRPPR
        MLIQSNSPVPPELARHEASKFKPGS+PDRPPR
Subjt:  MLIQSNSPVPPELARHEASKFKPGSIPDRPPR
Q9FZ92 Putative DEAD-box ATP-dependent RNA helicase 444.0e-0578.57Show/hide
Query:  LIQSNSPVPPELARHEASKFKPGSIPDR
        L + NS VPPELARHEASKFKPG+ PDR
Subjt:  LIQSNSPVPPELARHEASKFKPGSIPDR
Arabidopsis top hitse value%identityAlignment
AT1G28180.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein2.9e-0678.57Show/hide
Query:  LIQSNSPVPPELARHEASKFKPGSIPDR
        L + NS VPPELARHEASKFKPG+ PDR
Subjt:  LIQSNSPVPPELARHEASKFKPGSIPDR
AT2G33730.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein1.0e-1184.85Show/hide
Query:  MLIQSNSPVPPELARHEASKFKPGSIPDRPPRH
        ML+QSNS VPPELARHEAS+FKPG++PDRPPRH
Subjt:  MLIQSNSPVPPELARHEASKFKPGSIPDRPPRH

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTATCCAAAGCAATAGTCCCGTGCCTCCTGAATTGGCAAGGCATGAGGCATCTAAGTTCAAGCCTGGGAGTATTCCTGATAGACCTCCCCGACATGTTCTTGGCAT
AACTCATTATGGACTCGCAGATGGTGATGCTGATGGTGCTGACAACAATGATAGGGCCGTTGGTGCTGGCGACTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTTATCCAAAGCAATAGTCCCGTGCCTCCTGAATTGGCAAGGCATGAGGCATCTAAGTTCAAGCCTGGGAGTATTCCTGATAGACCTCCCCGACATGTTCTTGGCAT
AACTCATTATGGACTCGCAGATGGTGATGCTGATGGTGCTGACAACAATGATAGGGCCGTTGGTGCTGGCGACTAG
Protein sequenceShow/hide protein sequence
MLIQSNSPVPPELARHEASKFKPGSIPDRPPRHVLGITHYGLADGDADGADNNDRAVGAGD