; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0008414 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0008414
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr9:20893418..20895357
RNA-Seq ExpressionLag0008414
SyntenyLag0008414
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022142767.1 uncharacterized protein LOC111012805 [Momordica charantia]2.0e-3136.07Show/hide
Query:  SKPEELDRGK---------TQNDQDYEGQDLEVLIDQVDPPFNDKVIESQGAPEV---------QEALQVEGYNDGAALVAIIVGLEDERLLNSIGKNQP
        S+P  LD+GK          +++Q  +G DLE L+DQ D PF ++++  +   E          +E LQVEG  D  +L+A I G+ DE L  S GK  P
Subjt:  SKPEELDRGK---------TQNDQDYEGQDLEVLIDQVDPPFNDKVIESQGAPEV---------QEALQVEGYNDGAALVAIIVGLEDERLLNSIGKNQP

Query:  RTYAEFVSRVQ----------NKKD--------KRQQTDDGGRG----------QAHIFGKFEKYTPTTIPQEQVLMEIRNTGLLKFPGKMKSKPDRIDK
         T++E +SR Q          +K++        KR+++ D  +G          Q     KFEKYT TT+P EQVLMEI+N  LLK+P +M +   +  K
Subjt:  RTYAEFVSRVQ----------NKKD--------KRQQTDDGGRG----------QAHIFGKFEKYTPTTIPQEQVLMEIRNTGLLKFPGKMKSKPDRIDK

Query:  NQYCLFHWDHEHSTRNCIQLKDEIGTLIQNRYLKEFFVGIGTEVEADQRWSRQRRTPSRDQNHFCEG-LEFRNSVKRKRD
         +YCLFHWDH H+T++C  LK+E+  LI   YLKE+      E +A Q      ++P+R+      G +E  +  KRK D
Subjt:  NQYCLFHWDHEHSTRNCIQLKDEIGTLIQNRYLKEFFVGIGTEVEADQRWSRQRRTPSRDQNHFCEG-LEFRNSVKRKRD

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]2.9e-2537.96Show/hide
Query:  QEALQVEGYNDGAALVAIIVGLEDERLLNSIGKNQPRTYAEFVSRVQ----------NKKD--------KRQQTDDGGRG----------QAHIFGKFEK
        +E LQVEG  D  +L+A + G+ DE L  S GK  P T++E +SR Q          +K++        KR+++ D  +G          Q     KFEK
Subjt:  QEALQVEGYNDGAALVAIIVGLEDERLLNSIGKNQPRTYAEFVSRVQ----------NKKD--------KRQQTDDGGRG----------QAHIFGKFEK

Query:  YTPTTIPQEQVLMEIRNTGLLKFPGKMKSKPDRIDKNQYCLFHWDHEHSTRNCIQLKDEIGTLIQNRYLKEFFVGIGTEVEADQRWSRQRRTPSRDQNHF
        YTPTT+P EQVLMEI++  LLK+P +MK+   +  K +YCLFH DH H+T++C  LK+E+  LI+  YLKE+      E +A Q      ++P+R+    
Subjt:  YTPTTIPQEQVLMEIRNTGLLKFPGKMKSKPDRIDKNQYCLFHWDHEHSTRNCIQLKDEIGTLIQNRYLKEFFVGIGTEVEADQRWSRQRRTPSRDQNHF

Query:  CEG-LEFRNSVKRKRD
          G +E  +  KRK D
Subjt:  CEG-LEFRNSVKRKRD

XP_022159192.1 uncharacterized protein LOC111025612 [Momordica charantia]2.5e-2135.9Show/hide
Query:  GLEDERLLNSIGKNQPRTYAEFVSRVQN----------KKD--------KRQQT-----------DDGGRGQAHIFGKFEKYTPTTIPQEQVLMEIRNTG
        G++DE L  S GK  P T+AE +SR Q           KK+        KR+++            D   GQ  +  KFEKYTPTT+P EQVLMEI++  
Subjt:  GLEDERLLNSIGKNQPRTYAEFVSRVQN----------KKD--------KRQQT-----------DDGGRGQAHIFGKFEKYTPTTIPQEQVLMEIRNTG

Query:  LLKFPGKMKSKPDRIDKNQYCLFHWDHEHSTRNCIQLKDEIGTLIQNRYLKEFFVGIGTEVEADQRWSRQRRTPSRDQNHFCEGLEFRNSVKRKR
        LLK+P  MK+ P++  K +YCLFH DH H+T +C  LK+E+  LI+  YLKE+      +++A        ++P+R+      G   + S ++++
Subjt:  LLKFPGKMKSKPDRIDKNQYCLFHWDHEHSTRNCIQLKDEIGTLIQNRYLKEFFVGIGTEVEADQRWSRQRRTPSRDQNHFCEGLEFRNSVKRKR

XP_022159368.1 uncharacterized protein LOC111025785 [Momordica charantia]1.7e-2236.11Show/hide
Query:  QEALQVEGYNDGAALVAIIVGLEDERLLNSIGKNQPRTYAEFVSRVQ----------NKKD--------KRQQTDDGGRG----------QAHIFGKFEK
        +E LQ+E   D  +L+A + G+ DE L  S GK  P T++E +SR Q          +K++        KR+++ D  +G          Q     KFEK
Subjt:  QEALQVEGYNDGAALVAIIVGLEDERLLNSIGKNQPRTYAEFVSRVQ----------NKKD--------KRQQTDDGGRG----------QAHIFGKFEK

Query:  YTPTTIPQEQVLMEIRNTGLLKFPGKMKSKPDRIDKNQYCLFHWDHEHSTRNCIQLKDEIGTLIQNRYLKEFFVGIGTEVEADQRWSRQRRTPSRDQNHF
        YTPTT+P EQVLMEI++  LLK+P +MK    +  K +YCLFH DH H+T++   LK+E+  LI+  YL+E+      E +A Q      ++P+R+    
Subjt:  YTPTTIPQEQVLMEIRNTGLLKFPGKMKSKPDRIDKNQYCLFHWDHEHSTRNCIQLKDEIGTLIQNRYLKEFFVGIGTEVEADQRWSRQRRTPSRDQNHF

Query:  CEG-LEFRNSVKRKRD
          G +E  ++ KRK D
Subjt:  CEG-LEFRNSVKRKRD

XP_024042801.1 uncharacterized protein LOC112099618 [Citrus clementina]1.1e-2136.57Show/hide
Query:  QEALQVEGYNDGAALVAIIVGLEDERLLNSIGKNQPRTYAEFVSRVQNKKD-------KRQQTDDGGR------------------------GQAHIFGK
        +E ++VE Y+D  AL  I+VGL+  +   S+ KN  RT+ E +SR Q   +       KR    D  R                        G   +  +
Subjt:  QEALQVEGYNDGAALVAIIVGLEDERLLNSIGKNQPRTYAEFVSRVQNKKD-------KRQQTDDGGR------------------------GQAHIFGK

Query:  FEKYTPTTIPQEQVLMEIRNTGLLKFPGKMKSKPDRIDKNQYCLFHWDHEHSTRNCIQLKDEIGTLIQNRYLKEF
        F +YTP  +P+EQVLM+IRN  LL+ P  +K  P+R D+++YC +H DH H+  +C  LK+EI +LIQ  YLKEF
Subjt:  FEKYTPTTIPQEQVLMEIRNTGLLKFPGKMKSKPDRIDKNQYCLFHWDHEHSTRNCIQLKDEIGTLIQNRYLKEF

TrEMBL top hitse value%identityAlignment
A0A6J1CNT2 uncharacterized protein LOC1110128059.9e-3236.07Show/hide
Query:  SKPEELDRGK---------TQNDQDYEGQDLEVLIDQVDPPFNDKVIESQGAPEV---------QEALQVEGYNDGAALVAIIVGLEDERLLNSIGKNQP
        S+P  LD+GK          +++Q  +G DLE L+DQ D PF ++++  +   E          +E LQVEG  D  +L+A I G+ DE L  S GK  P
Subjt:  SKPEELDRGK---------TQNDQDYEGQDLEVLIDQVDPPFNDKVIESQGAPEV---------QEALQVEGYNDGAALVAIIVGLEDERLLNSIGKNQP

Query:  RTYAEFVSRVQ----------NKKD--------KRQQTDDGGRG----------QAHIFGKFEKYTPTTIPQEQVLMEIRNTGLLKFPGKMKSKPDRIDK
         T++E +SR Q          +K++        KR+++ D  +G          Q     KFEKYT TT+P EQVLMEI+N  LLK+P +M +   +  K
Subjt:  RTYAEFVSRVQ----------NKKD--------KRQQTDDGGRG----------QAHIFGKFEKYTPTTIPQEQVLMEIRNTGLLKFPGKMKSKPDRIDK

Query:  NQYCLFHWDHEHSTRNCIQLKDEIGTLIQNRYLKEFFVGIGTEVEADQRWSRQRRTPSRDQNHFCEG-LEFRNSVKRKRD
         +YCLFHWDH H+T++C  LK+E+  LI   YLKE+      E +A Q      ++P+R+      G +E  +  KRK D
Subjt:  NQYCLFHWDHEHSTRNCIQLKDEIGTLIQNRYLKEFFVGIGTEVEADQRWSRQRRTPSRDQNHFCEG-LEFRNSVKRKRD

A0A6J1DWY0 uncharacterized protein LOC1110252931.4e-2537.96Show/hide
Query:  QEALQVEGYNDGAALVAIIVGLEDERLLNSIGKNQPRTYAEFVSRVQ----------NKKD--------KRQQTDDGGRG----------QAHIFGKFEK
        +E LQVEG  D  +L+A + G+ DE L  S GK  P T++E +SR Q          +K++        KR+++ D  +G          Q     KFEK
Subjt:  QEALQVEGYNDGAALVAIIVGLEDERLLNSIGKNQPRTYAEFVSRVQ----------NKKD--------KRQQTDDGGRG----------QAHIFGKFEK

Query:  YTPTTIPQEQVLMEIRNTGLLKFPGKMKSKPDRIDKNQYCLFHWDHEHSTRNCIQLKDEIGTLIQNRYLKEFFVGIGTEVEADQRWSRQRRTPSRDQNHF
        YTPTT+P EQVLMEI++  LLK+P +MK+   +  K +YCLFH DH H+T++C  LK+E+  LI+  YLKE+      E +A Q      ++P+R+    
Subjt:  YTPTTIPQEQVLMEIRNTGLLKFPGKMKSKPDRIDKNQYCLFHWDHEHSTRNCIQLKDEIGTLIQNRYLKEFFVGIGTEVEADQRWSRQRRTPSRDQNHF

Query:  CEG-LEFRNSVKRKRD
          G +E  +  KRK D
Subjt:  CEG-LEFRNSVKRKRD

A0A6J1DXW4 uncharacterized protein LOC1110255854.3e-1934.71Show/hide
Query:  QEALQVEGYNDGAALVAIIVGLEDERLLNSIGKNQPRTYAEFVSRVQNKKDKRQQTDDGGRGQAHIFGKFEKYTPTTIPQEQVLMEIRNTG---LLKFPG
        +E L+V   +D +A+   +  L DE L   +G+  P T+AE + + +   D R  +D   R      G +E YTPTTIP  ++L  I   G   LLK P 
Subjt:  QEALQVEGYNDGAALVAIIVGLEDERLLNSIGKNQPRTYAEFVSRVQNKKDKRQQTDDGGRGQAHIFGKFEKYTPTTIPQEQVLMEIRNTG---LLKFPG

Query:  KMKSKPDRIDKNQYCLFHWDHEHSTRNCIQLKDEIGTLIQNRYLKEFFVGIGTEVEADQRWSRQRRTPSR
        K++  P++ +K++YC FH DH + T NC +LK +I  LIQ+ Y K++    G+     +   ++ RTP R
Subjt:  KMKSKPDRIDKNQYCLFHWDHEHSTRNCIQLKDEIGTLIQNRYLKEFFVGIGTEVEADQRWSRQRRTPSR

A0A6J1DYL6 uncharacterized protein LOC1110257858.4e-2336.11Show/hide
Query:  QEALQVEGYNDGAALVAIIVGLEDERLLNSIGKNQPRTYAEFVSRVQ----------NKKD--------KRQQTDDGGRG----------QAHIFGKFEK
        +E LQ+E   D  +L+A + G+ DE L  S GK  P T++E +SR Q          +K++        KR+++ D  +G          Q     KFEK
Subjt:  QEALQVEGYNDGAALVAIIVGLEDERLLNSIGKNQPRTYAEFVSRVQ----------NKKD--------KRQQTDDGGRG----------QAHIFGKFEK

Query:  YTPTTIPQEQVLMEIRNTGLLKFPGKMKSKPDRIDKNQYCLFHWDHEHSTRNCIQLKDEIGTLIQNRYLKEFFVGIGTEVEADQRWSRQRRTPSRDQNHF
        YTPTT+P EQVLMEI++  LLK+P +MK    +  K +YCLFH DH H+T++   LK+E+  LI+  YL+E+      E +A Q      ++P+R+    
Subjt:  YTPTTIPQEQVLMEIRNTGLLKFPGKMKSKPDRIDKNQYCLFHWDHEHSTRNCIQLKDEIGTLIQNRYLKEFFVGIGTEVEADQRWSRQRRTPSRDQNHF

Query:  CEG-LEFRNSVKRKRD
          G +E  ++ KRK D
Subjt:  CEG-LEFRNSVKRKRD

A0A6J1DZ52 uncharacterized protein LOC1110256121.2e-2135.9Show/hide
Query:  GLEDERLLNSIGKNQPRTYAEFVSRVQN----------KKD--------KRQQT-----------DDGGRGQAHIFGKFEKYTPTTIPQEQVLMEIRNTG
        G++DE L  S GK  P T+AE +SR Q           KK+        KR+++            D   GQ  +  KFEKYTPTT+P EQVLMEI++  
Subjt:  GLEDERLLNSIGKNQPRTYAEFVSRVQN----------KKD--------KRQQT-----------DDGGRGQAHIFGKFEKYTPTTIPQEQVLMEIRNTG

Query:  LLKFPGKMKSKPDRIDKNQYCLFHWDHEHSTRNCIQLKDEIGTLIQNRYLKEFFVGIGTEVEADQRWSRQRRTPSRDQNHFCEGLEFRNSVKRKR
        LLK+P  MK+ P++  K +YCLFH DH H+T +C  LK+E+  LI+  YLKE+      +++A        ++P+R+      G   + S ++++
Subjt:  LLKFPGKMKSKPDRIDKNQYCLFHWDHEHSTRNCIQLKDEIGTLIQNRYLKEFFVGIGTEVEADQRWSRQRRTPSRDQNHFCEGLEFRNSVKRKR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGAACGTTCGGACGGTGACCACCACCTACGGAGGCCGCGAGAAGAAAGTCGAGGTCGACCTCGAACCCAATCTCCTCGGCCTCCTTCATGAGAGAGGTAGACTGAT
GTCAAAATTTCTGCCCTTGAGGATTAGAAGGACACGACCTCATCGTTTTGACTCCAAGTATCAGTCGCACCACATGAGCAAACCTGAGGAACTTGATCGAGGAAAAACGC
AGAATGACCAAGATTATGAAGGACAAGACTTGGAAGTCCTGATTGACCAGGTTGATCCACCATTCAATGATAAAGTCATTGAAAGTCAAGGTGCCCCAGAAGTTCAAGAA
GCACTTCAGGTTGAAGGATACAACGATGGAGCAGCCCTGGTAGCCATAATTGTCGGGTTGGAGGACGAGAGGTTGCTTAATTCGATAGGAAAAAATCAACCTCGTACCTA
TGCTGAGTTTGTCTCTAGAGTCCAAAATAAGAAGGACAAAAGGCAGCAGACAGACGATGGTGGCCGAGGCCAAGCACATATCTTTGGTAAGTTTGAGAAATATACACCAA
CTACTATTCCACAGGAGCAAGTTCTGATGGAGATTCGAAACACAGGTCTTCTTAAATTCCCGGGGAAGATGAAGTCAAAACCTGATAGAATAGACAAGAACCAATACTGT
CTTTTCCATTGGGACCACGAGCATTCAACTAGAAACTGTATTCAGTTGAAGGATGAAATTGGGACACTGATCCAAAATAGATATCTGAAGGAGTTTTTCGTTGGAATCGG
GACCGAGGTCGAGGCTGACCAGAGATGGTCGAGACAAAGAAGAACCCCCTCGAGAGATCAGAACCATTTTTGTGAAGGATTGGAATTCCGTAATTCCGTAAAGCGGAAGC
GTGATTGGGACCGATTCTGTGAACACCACCACTATGGCTACACCGATATGACTCTGAGACTTCTAGAGGCAAGGGACTGGTGGGAGTCTAGAGGAAGCCTTGAGGGGAAT
TCTCTGAGAGAAGGAGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGCAGAACGTTCGGACGGTGACCACCACCTACGGAGGCCGCGAGAAGAAAGTCGAGGTCGACCTCGAACCCAATCTCCTCGGCCTCCTTCATGAGAGAGGTAGACTGAT
GTCAAAATTTCTGCCCTTGAGGATTAGAAGGACACGACCTCATCGTTTTGACTCCAAGTATCAGTCGCACCACATGAGCAAACCTGAGGAACTTGATCGAGGAAAAACGC
AGAATGACCAAGATTATGAAGGACAAGACTTGGAAGTCCTGATTGACCAGGTTGATCCACCATTCAATGATAAAGTCATTGAAAGTCAAGGTGCCCCAGAAGTTCAAGAA
GCACTTCAGGTTGAAGGATACAACGATGGAGCAGCCCTGGTAGCCATAATTGTCGGGTTGGAGGACGAGAGGTTGCTTAATTCGATAGGAAAAAATCAACCTCGTACCTA
TGCTGAGTTTGTCTCTAGAGTCCAAAATAAGAAGGACAAAAGGCAGCAGACAGACGATGGTGGCCGAGGCCAAGCACATATCTTTGGTAAGTTTGAGAAATATACACCAA
CTACTATTCCACAGGAGCAAGTTCTGATGGAGATTCGAAACACAGGTCTTCTTAAATTCCCGGGGAAGATGAAGTCAAAACCTGATAGAATAGACAAGAACCAATACTGT
CTTTTCCATTGGGACCACGAGCATTCAACTAGAAACTGTATTCAGTTGAAGGATGAAATTGGGACACTGATCCAAAATAGATATCTGAAGGAGTTTTTCGTTGGAATCGG
GACCGAGGTCGAGGCTGACCAGAGATGGTCGAGACAAAGAAGAACCCCCTCGAGAGATCAGAACCATTTTTGTGAAGGATTGGAATTCCGTAATTCCGTAAAGCGGAAGC
GTGATTGGGACCGATTCTGTGAACACCACCACTATGGCTACACCGATATGACTCTGAGACTTCTAGAGGCAAGGGACTGGTGGGAGTCTAGAGGAAGCCTTGAGGGGAAT
TCTCTGAGAGAAGGAGAATGA
Protein sequenceShow/hide protein sequence
MQNVRTVTTTYGGREKKVEVDLEPNLLGLLHERGRLMSKFLPLRIRRTRPHRFDSKYQSHHMSKPEELDRGKTQNDQDYEGQDLEVLIDQVDPPFNDKVIESQGAPEVQE
ALQVEGYNDGAALVAIIVGLEDERLLNSIGKNQPRTYAEFVSRVQNKKDKRQQTDDGGRGQAHIFGKFEKYTPTTIPQEQVLMEIRNTGLLKFPGKMKSKPDRIDKNQYC
LFHWDHEHSTRNCIQLKDEIGTLIQNRYLKEFFVGIGTEVEADQRWSRQRRTPSRDQNHFCEGLEFRNSVKRKRDWDRFCEHHHYGYTDMTLRLLEARDWWESRGSLEGN
SLREGE