| GenBank top hits | e value | %identity | Alignment |
|---|
| GAU37351.1 hypothetical protein TSUD_395330 [Trifolium subterraneum] | 2.8e-97 | 42.99 | Show/hide |
Query: HKGYKCPDSTGRTYISRHVLFYETCFP-----------------------FPNSSSKSVTNAPSIVSQQLSIVPSYVNDHAFVSLPTNSPLLSPLSNSQP
HKG+KC D++GR YIS+ V+F+E+ +P FP + ++ + P+ VSQQ + PS + ++P+ P S+S P
Subjt: HKGYKCPDSTGRTYISRHVLFYETCFP-----------------------FPNSSSKSVTNAPSIVSQQLSIVPSYVNDHAFVSLPTNSPLLSPLSNSQP
Query: ISRTSDTTSPSHLSPVPSATISSHETCPTQEAEPDTQPTHVDSISNHPMITRSKSGIFKPKVFLTTYVDFEPPNAKEALKCSHWKKAMQVEYDAQIQNKM
+ S ++ + S +SS P P + + +NH MITR K+G KPK+FL + EP + AL W KAMQ EY A + NK
Subjt: ISRTSDTTSPSHLSPVPSATISSHETCPTQEAEPDTQPTHVDSISNHPMITRSKSGIFKPKVFLTTYVDFEPPNAKEALKCSHWKKAMQVEYDAQIQNKM
Query: WELVPVPSNHKIVGCKWVFKIKRNSDRSISHYKARLVAKVFHQSADIDYFETFSPVVKPITIRVLLSLDISYDWPIRQIDINNAFLHGVLSETIYMEQPT
W LVP+P + K +GCKW+F++K N D +++ YKARLV K F Q+A D+ ETFSPV+KP+TIR++L+L +++ W I+QID+NNAFL+GVL E +YM QP+
Subjt: WELVPVPSNHKIVGCKWVFKIKRNSDRSISHYKARLVAKVFHQSADIDYFETFSPVVKPITIRVLLSLDISYDWPIRQIDINNAFLHGVLSETIYMEQPT
Query: GFQVHGSYPLVCKLHKALYGLKQAPRAWFDRLNMFLQSLGFVNSRADTSLLFQKSGNICCNILVYMNDIIISGNSMAVVTSLIAKLNGRFSLKDLGPLSY
GF+ LVCKLHK+LYGLKQAPRAW+D+L L +GFV SR D SLL C +L+YM+DI+I+G++ ++ LI KLN +F+LK LG + Y
Subjt: GFQVHGSYPLVCKLHKALYGLKQAPRAWFDRLNMFLQSLGFVNSRADTSLLFQKSGNICCNILVYMNDIIISGNSMAVVTSLIAKLNGRFSLKDLGPLSY
Query: FLEIEVSYPPSGDLFLSQAKYIMDLLQRTHMAEAKAISTPMI
FL +EV + PSG L L+Q KYI DLL + HM ++K + +PM+
Subjt: FLEIEVSYPPSGDLFLSQAKYIMDLLQRTHMAEAKAISTPMI
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| PNX92906.1 retrovirus-related Pol polyprotein from transposon TNT 1-94 [Trifolium pratense] | 6.3e-97 | 46.14 | Show/hide |
Query: HKGYKCPDSTGRTYISRHVLFYETCFPFPN---SSSKSVTNAPSIVSQQLSIVPSYVNDHAFVSLPTNSPL-----LSPLSNSQPISRTSDTTSPSHLSP
HKG+KC D+ GR Y+S+ V+F+ET FP+ + +SS S +N+ + + + +D T+ PL SPL+ +Q S S +PSH
Subjt: HKGYKCPDSTGRTYISRHVLFYETCFPFPN---SSSKSVTNAPSIVSQQLSIVPSYVNDHAFVSLPTNSPL-----LSPLSNSQPISRTSDTTSPSHLSP
Query: VPSATISSHETCPTQEAEPDTQPTHVDSISNHPMITRSKSGIFKPKVFLTTYVDFEPPNAKEALKCSHWKKAMQVEYDAQIQNKMWELVPVPSNHKIVGC
T S H+T + +P QP H S +NHPM+TR K+G KPKV + EP + + AL W KAMQ EY A + N W LV +P + K +GC
Subjt: VPSATISSHETCPTQEAEPDTQPTHVDSISNHPMITRSKSGIFKPKVFLTTYVDFEPPNAKEALKCSHWKKAMQVEYDAQIQNKMWELVPVPSNHKIVGC
Query: KWVFKIKRNSDRSISHYKARLVAKVFHQSADIDYFETFSPVVKPITIRVLLSLDISYDWPIRQIDINNAFLHGVLSETIYMEQPTGFQVHGSYPLVCKLH
KW+F++K N D +++ YKARLVAK F Q+ D+ ETFSPV+KP TIR++L+L ++Y W ++QID+NNAFL+G+L E +YM QP+GF+V LVCKLH
Subjt: KWVFKIKRNSDRSISHYKARLVAKVFHQSADIDYFETFSPVVKPITIRVLLSLDISYDWPIRQIDINNAFLHGVLSETIYMEQPTGFQVHGSYPLVCKLH
Query: KALYGLKQAPRAWFDRLNMFLQSLGFVNSRADTSLLFQKSGNICCNILVYMNDIIISGNSMAVVTSLIAKLNGRFSLKDLGPLSYFLEIEVSYPPSGDLF
K+LYGLKQAPRAW++RL L +GFV S+ D SLL C +L+Y++DI+I+G++ ++ LI KLN +FSLK LG + YFL IEV + PSG L
Subjt: KALYGLKQAPRAWFDRLNMFLQSLGFVNSRADTSLLFQKSGNICCNILVYMNDIIISGNSMAVVTSLIAKLNGRFSLKDLGPLSYFLEIEVSYPPSGDLF
Query: LSQAKYIMDLLQRTHMAEAKAISTPMI
L+Q+KYI DLL RT M KAI +PM+
Subjt: LSQAKYIMDLLQRTHMAEAKAISTPMI
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| PNX94499.1 retrovirus-related Pol polyprotein from transposon TNT 1-94, partial [Trifolium pratense] | 8.2e-97 | 46.12 | Show/hide |
Query: HKGYKCPDSTGRTYISRHVLFYETCFPFPNSSSKSVTNAPSIVSQQLSIVPSYVNDHAFVSLPTNSPLLS---PLSNSQPISRTSDTTSPSHLS-PVPSA
HKG+KC D GR Y+S+ V+F+E+ FP+ + S TN ++ ++L TNSP S P + SQ S + T S +S P+ S+
Subjt: HKGYKCPDSTGRTYISRHVLFYETCFPFPNSSSKSVTNAPSIVSQQLSIVPSYVNDHAFVSLPTNSPLLS---PLSNSQPISRTSDTTSPSHLS-PVPSA
Query: TISSH-ETCPTQEAEPDTQPTHVDSISN-HPMITRSKSGIFKPKVFLTTYVDFEPPNAKEALKCSHWKKAMQVEYDAQIQNKMWELVPVPSNHKIVGCKW
+SH P+ E +P PT S N HPM+TR K+G KPK F+ EP + K AL +W +AMQ EY A + N W LVP+P + K +GCKW
Subjt: TISSH-ETCPTQEAEPDTQPTHVDSISN-HPMITRSKSGIFKPKVFLTTYVDFEPPNAKEALKCSHWKKAMQVEYDAQIQNKMWELVPVPSNHKIVGCKW
Query: VFKIKRNSDRSISHYKARLVAKVFHQSADIDYFETFSPVVKPITIRVLLSLDISYDWPIRQIDINNAFLHGVLSETIYMEQPTGFQVHGSYPLVCKLHKA
+F+IK N D +++ YKARLVAK F Q+ D+ ETFSPV+KP+TIR++L+L ++Y W ++QID+NNAFL+GVL E +YM QP GF+ LVCKLHK+
Subjt: VFKIKRNSDRSISHYKARLVAKVFHQSADIDYFETFSPVVKPITIRVLLSLDISYDWPIRQIDINNAFLHGVLSETIYMEQPTGFQVHGSYPLVCKLHKA
Query: LYGLKQAPRAWFDRLNMFLQSLGFVNSRADTSLLFQKSGNICCNILVYMNDIIISGNSMAVVTSLIAKLNGRFSLKDLGPLSYFLEIEVSYPPSGDLFLS
LYGLKQAPRAW++RL L LGFV S+ D SLL C +L+Y++DI+I+G++ ++ +I KLN +F+LK LG + YFL IEV + PSG L L+
Subjt: LYGLKQAPRAWFDRLNMFLQSLGFVNSRADTSLLFQKSGNICCNILVYMNDIIISGNSMAVVTSLIAKLNGRFSLKDLGPLSYFLEIEVSYPPSGDLFLS
Query: QAKYIMDLLQRTHMAEAKAISTPMI
Q+KYI DLL RT+M K I +PM+
Subjt: QAKYIMDLLQRTHMAEAKAISTPMI
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| PNY02741.1 retrovirus-related Pol polyprotein from transposon TNT 1-94, partial [Trifolium pratense] | 1.3e-97 | 46.85 | Show/hide |
Query: MHKGYKCPDSTGRTYISRHVLFYETCFPFPNSSSKSVTNAPSIVSQQLSIVPS--YVNDHAFVSLPTN-----SPLLSPLSNSQPISRTS--DTTSPSHL
+HKG+KC S GR YIS+ V+F ET FPF + +S S T + S S S++P+ + N VS+ + SP+ S + QP+ TS T +P +
Subjt: MHKGYKCPDSTGRTYISRHVLFYETCFPFPNSSSKSVTNAPSIVSQQLSIVPS--YVNDHAFVSLPTN-----SPLLSPLSNSQPISRTS--DTTSPSHL
Query: SPVPSATISSHETCPTQEAEPDTQPTHVDSISNHPMITRSKSGIFKPKVFLTTYVDFEPPNAKEALKCSHWKKAMQVEYDAQIQNKMWELVPVPSNHKIV
P I S T P ++P ++++HPM+TR K+G KPKVFL EP N K+AL W AM+ EY A + N+ W LVP+P++ + +
Subjt: SPVPSATISSHETCPTQEAEPDTQPTHVDSISNHPMITRSKSGIFKPKVFLTTYVDFEPPNAKEALKCSHWKKAMQVEYDAQIQNKMWELVPVPSNHKIV
Query: GCKWVFKIKRNSDRSISHYKARLVAKVFHQSADIDYFETFSPVVKPITIRVLLSLDISYDWPIRQIDINNAFLHGVLSETIYMEQPTGFQVHGSYPLVCK
GCKWVF+IK N D S++ YKARLVAK + Q DY ETFSPVVKP+TIR++L+L IS+ W I+QIDINNAFL+G+L E +YM QP GF + LVC+
Subjt: GCKWVFKIKRNSDRSISHYKARLVAKVFHQSADIDYFETFSPVVKPITIRVLLSLDISYDWPIRQIDINNAFLHGVLSETIYMEQPTGFQVHGSYPLVCK
Query: LHKALYGLKQAPRAWFDRLNMFLQSLGFVNSRADTSLLFQKSGNICCNILVYMNDIIISGNSMAVVTSLIAKLNGRFSLKDLGPLSYFLEIEVSYPPSGD
LH+ALYGLKQAPRAW++RL L GF S+ D SL I +LVY++DI+++G+S +++ LI+KLN +F+LK +G YFL IEV + P+G+
Subjt: LHKALYGLKQAPRAWFDRLNMFLQSLGFVNSRADTSLLFQKSGNICCNILVYMNDIIISGNSMAVVTSLIAKLNGRFSLKDLGPLSYFLEIEVSYPPSGD
Query: LFLSQAKYIMDLLQRTHMAEAKAISTPMI
+ L+Q+KYI DLL R +MAEAK I+TPM+
Subjt: LFLSQAKYIMDLLQRTHMAEAKAISTPMI
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| PNY10806.1 histone deacetylase [Trifolium pratense] | 9.4e-101 | 48.39 | Show/hide |
Query: HKGYKCPDSTGRTYISRHVLFYETCFP----FPNSSSKSVTNAPSIVSQQLSIVPSYVNDHAFVSLPTNSPL------LSPLSNS-----QPISRTSDTT
HKGYKC GR YIS+ V+F E FP FPN+S + TN S + +PS V+ SPL +SP+ N+ PIS S +
Subjt: HKGYKCPDSTGRTYISRHVLFYETCFP----FPNSSSKSVTNAPSIVSQQLSIVPSYVNDHAFVSLPTNSPL------LSPLSNS-----QPISRTSDTT
Query: SPSHLSPVPSATISSHETCPTQEAEPDTQPTHVDSISNHPMITRSKSGIFKPKVFLTTYVDFEPPNAKEALKCSHWKKAMQVEYDAQIQNKMWELVPVPS
+PS SPV S + + P ++ +P PT + HPM+TR K+G KPKVFL EP + K AL +W KAM+ EY A + NK W LVP+P+
Subjt: SPSHLSPVPSATISSHETCPTQEAEPDTQPTHVDSISNHPMITRSKSGIFKPKVFLTTYVDFEPPNAKEALKCSHWKKAMQVEYDAQIQNKMWELVPVPS
Query: NHKIVGCKWVFKIKRNSDRSISHYKARLVAKVFHQSADIDYFETFSPVVKPITIRVLLSLDISYDWPIRQIDINNAFLHGVLSETIYMEQPTGFQVHGSY
+ + +GCKWVF+IK N D SI+ YKARLVAK F Q D+ ETFSPVVKP+TIR++L+L +S+ W I+QIDINNAFL+G+L E +YM QP GF +G
Subjt: NHKIVGCKWVFKIKRNSDRSISHYKARLVAKVFHQSADIDYFETFSPVVKPITIRVLLSLDISYDWPIRQIDINNAFLHGVLSETIYMEQPTGFQVHGSY
Query: PLVCKLHKALYGLKQAPRAWFDRLNMFLQSLGFVNSRADTSLLFQKSGNICCNILVYMNDIIISGNSMAVVTSLIAKLNGRFSLKDLGPLSYFLEIEVSY
LVCKLHKALYGLKQAPRAW+DRL L S GF S+ D SL + +LVY++DI+++G+S ++ LIAKL+ +F+LK +G YFL IEV Y
Subjt: PLVCKLHKALYGLKQAPRAWFDRLNMFLQSLGFVNSRADTSLLFQKSGNICCNILVYMNDIIISGNSMAVVTSLIAKLNGRFSLKDLGPLSYFLEIEVSY
Query: PPSGDLFLSQAKYIMDLLQRTHMAEAKAISTPMI
PSG++ L+Q+KYI DLL R +MA+AK I+TPM+
Subjt: PPSGDLFLSQAKYIMDLLQRTHMAEAKAISTPMI
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A2K3MQ67 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.0e-97 | 46.14 | Show/hide |
Query: HKGYKCPDSTGRTYISRHVLFYETCFPFPN---SSSKSVTNAPSIVSQQLSIVPSYVNDHAFVSLPTNSPL-----LSPLSNSQPISRTSDTTSPSHLSP
HKG+KC D+ GR Y+S+ V+F+ET FP+ + +SS S +N+ + + + +D T+ PL SPL+ +Q S S +PSH
Subjt: HKGYKCPDSTGRTYISRHVLFYETCFPFPN---SSSKSVTNAPSIVSQQLSIVPSYVNDHAFVSLPTNSPL-----LSPLSNSQPISRTSDTTSPSHLSP
Query: VPSATISSHETCPTQEAEPDTQPTHVDSISNHPMITRSKSGIFKPKVFLTTYVDFEPPNAKEALKCSHWKKAMQVEYDAQIQNKMWELVPVPSNHKIVGC
T S H+T + +P QP H S +NHPM+TR K+G KPKV + EP + + AL W KAMQ EY A + N W LV +P + K +GC
Subjt: VPSATISSHETCPTQEAEPDTQPTHVDSISNHPMITRSKSGIFKPKVFLTTYVDFEPPNAKEALKCSHWKKAMQVEYDAQIQNKMWELVPVPSNHKIVGC
Query: KWVFKIKRNSDRSISHYKARLVAKVFHQSADIDYFETFSPVVKPITIRVLLSLDISYDWPIRQIDINNAFLHGVLSETIYMEQPTGFQVHGSYPLVCKLH
KW+F++K N D +++ YKARLVAK F Q+ D+ ETFSPV+KP TIR++L+L ++Y W ++QID+NNAFL+G+L E +YM QP+GF+V LVCKLH
Subjt: KWVFKIKRNSDRSISHYKARLVAKVFHQSADIDYFETFSPVVKPITIRVLLSLDISYDWPIRQIDINNAFLHGVLSETIYMEQPTGFQVHGSYPLVCKLH
Query: KALYGLKQAPRAWFDRLNMFLQSLGFVNSRADTSLLFQKSGNICCNILVYMNDIIISGNSMAVVTSLIAKLNGRFSLKDLGPLSYFLEIEVSYPPSGDLF
K+LYGLKQAPRAW++RL L +GFV S+ D SLL C +L+Y++DI+I+G++ ++ LI KLN +FSLK LG + YFL IEV + PSG L
Subjt: KALYGLKQAPRAWFDRLNMFLQSLGFVNSRADTSLLFQKSGNICCNILVYMNDIIISGNSMAVVTSLIAKLNGRFSLKDLGPLSYFLEIEVSYPPSGDLF
Query: LSQAKYIMDLLQRTHMAEAKAISTPMI
L+Q+KYI DLL RT M KAI +PM+
Subjt: LSQAKYIMDLLQRTHMAEAKAISTPMI
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| A0A2K3MUX8 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) | 4.0e-97 | 46.12 | Show/hide |
Query: HKGYKCPDSTGRTYISRHVLFYETCFPFPNSSSKSVTNAPSIVSQQLSIVPSYVNDHAFVSLPTNSPLLS---PLSNSQPISRTSDTTSPSHLS-PVPSA
HKG+KC D GR Y+S+ V+F+E+ FP+ + S TN ++ ++L TNSP S P + SQ S + T S +S P+ S+
Subjt: HKGYKCPDSTGRTYISRHVLFYETCFPFPNSSSKSVTNAPSIVSQQLSIVPSYVNDHAFVSLPTNSPLLS---PLSNSQPISRTSDTTSPSHLS-PVPSA
Query: TISSH-ETCPTQEAEPDTQPTHVDSISN-HPMITRSKSGIFKPKVFLTTYVDFEPPNAKEALKCSHWKKAMQVEYDAQIQNKMWELVPVPSNHKIVGCKW
+SH P+ E +P PT S N HPM+TR K+G KPK F+ EP + K AL +W +AMQ EY A + N W LVP+P + K +GCKW
Subjt: TISSH-ETCPTQEAEPDTQPTHVDSISN-HPMITRSKSGIFKPKVFLTTYVDFEPPNAKEALKCSHWKKAMQVEYDAQIQNKMWELVPVPSNHKIVGCKW
Query: VFKIKRNSDRSISHYKARLVAKVFHQSADIDYFETFSPVVKPITIRVLLSLDISYDWPIRQIDINNAFLHGVLSETIYMEQPTGFQVHGSYPLVCKLHKA
+F+IK N D +++ YKARLVAK F Q+ D+ ETFSPV+KP+TIR++L+L ++Y W ++QID+NNAFL+GVL E +YM QP GF+ LVCKLHK+
Subjt: VFKIKRNSDRSISHYKARLVAKVFHQSADIDYFETFSPVVKPITIRVLLSLDISYDWPIRQIDINNAFLHGVLSETIYMEQPTGFQVHGSYPLVCKLHKA
Query: LYGLKQAPRAWFDRLNMFLQSLGFVNSRADTSLLFQKSGNICCNILVYMNDIIISGNSMAVVTSLIAKLNGRFSLKDLGPLSYFLEIEVSYPPSGDLFLS
LYGLKQAPRAW++RL L LGFV S+ D SLL C +L+Y++DI+I+G++ ++ +I KLN +F+LK LG + YFL IEV + PSG L L+
Subjt: LYGLKQAPRAWFDRLNMFLQSLGFVNSRADTSLLFQKSGNICCNILVYMNDIIISGNSMAVVTSLIAKLNGRFSLKDLGPLSYFLEIEVSYPPSGDLFLS
Query: QAKYIMDLLQRTHMAEAKAISTPMI
Q+KYI DLL RT+M K I +PM+
Subjt: QAKYIMDLLQRTHMAEAKAISTPMI
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| A0A2K3NI85 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) | 6.1e-98 | 46.85 | Show/hide |
Query: MHKGYKCPDSTGRTYISRHVLFYETCFPFPNSSSKSVTNAPSIVSQQLSIVPS--YVNDHAFVSLPTN-----SPLLSPLSNSQPISRTS--DTTSPSHL
+HKG+KC S GR YIS+ V+F ET FPF + +S S T + S S S++P+ + N VS+ + SP+ S + QP+ TS T +P +
Subjt: MHKGYKCPDSTGRTYISRHVLFYETCFPFPNSSSKSVTNAPSIVSQQLSIVPS--YVNDHAFVSLPTN-----SPLLSPLSNSQPISRTS--DTTSPSHL
Query: SPVPSATISSHETCPTQEAEPDTQPTHVDSISNHPMITRSKSGIFKPKVFLTTYVDFEPPNAKEALKCSHWKKAMQVEYDAQIQNKMWELVPVPSNHKIV
P I S T P ++P ++++HPM+TR K+G KPKVFL EP N K+AL W AM+ EY A + N+ W LVP+P++ + +
Subjt: SPVPSATISSHETCPTQEAEPDTQPTHVDSISNHPMITRSKSGIFKPKVFLTTYVDFEPPNAKEALKCSHWKKAMQVEYDAQIQNKMWELVPVPSNHKIV
Query: GCKWVFKIKRNSDRSISHYKARLVAKVFHQSADIDYFETFSPVVKPITIRVLLSLDISYDWPIRQIDINNAFLHGVLSETIYMEQPTGFQVHGSYPLVCK
GCKWVF+IK N D S++ YKARLVAK + Q DY ETFSPVVKP+TIR++L+L IS+ W I+QIDINNAFL+G+L E +YM QP GF + LVC+
Subjt: GCKWVFKIKRNSDRSISHYKARLVAKVFHQSADIDYFETFSPVVKPITIRVLLSLDISYDWPIRQIDINNAFLHGVLSETIYMEQPTGFQVHGSYPLVCK
Query: LHKALYGLKQAPRAWFDRLNMFLQSLGFVNSRADTSLLFQKSGNICCNILVYMNDIIISGNSMAVVTSLIAKLNGRFSLKDLGPLSYFLEIEVSYPPSGD
LH+ALYGLKQAPRAW++RL L GF S+ D SL I +LVY++DI+++G+S +++ LI+KLN +F+LK +G YFL IEV + P+G+
Subjt: LHKALYGLKQAPRAWFDRLNMFLQSLGFVNSRADTSLLFQKSGNICCNILVYMNDIIISGNSMAVVTSLIAKLNGRFSLKDLGPLSYFLEIEVSYPPSGD
Query: LFLSQAKYIMDLLQRTHMAEAKAISTPMI
+ L+Q+KYI DLL R +MAEAK I+TPM+
Subjt: LFLSQAKYIMDLLQRTHMAEAKAISTPMI
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| A0A2K3P695 Histone deacetylase | 4.5e-101 | 48.39 | Show/hide |
Query: HKGYKCPDSTGRTYISRHVLFYETCFP----FPNSSSKSVTNAPSIVSQQLSIVPSYVNDHAFVSLPTNSPL------LSPLSNS-----QPISRTSDTT
HKGYKC GR YIS+ V+F E FP FPN+S + TN S + +PS V+ SPL +SP+ N+ PIS S +
Subjt: HKGYKCPDSTGRTYISRHVLFYETCFP----FPNSSSKSVTNAPSIVSQQLSIVPSYVNDHAFVSLPTNSPL------LSPLSNS-----QPISRTSDTT
Query: SPSHLSPVPSATISSHETCPTQEAEPDTQPTHVDSISNHPMITRSKSGIFKPKVFLTTYVDFEPPNAKEALKCSHWKKAMQVEYDAQIQNKMWELVPVPS
+PS SPV S + + P ++ +P PT + HPM+TR K+G KPKVFL EP + K AL +W KAM+ EY A + NK W LVP+P+
Subjt: SPSHLSPVPSATISSHETCPTQEAEPDTQPTHVDSISNHPMITRSKSGIFKPKVFLTTYVDFEPPNAKEALKCSHWKKAMQVEYDAQIQNKMWELVPVPS
Query: NHKIVGCKWVFKIKRNSDRSISHYKARLVAKVFHQSADIDYFETFSPVVKPITIRVLLSLDISYDWPIRQIDINNAFLHGVLSETIYMEQPTGFQVHGSY
+ + +GCKWVF+IK N D SI+ YKARLVAK F Q D+ ETFSPVVKP+TIR++L+L +S+ W I+QIDINNAFL+G+L E +YM QP GF +G
Subjt: NHKIVGCKWVFKIKRNSDRSISHYKARLVAKVFHQSADIDYFETFSPVVKPITIRVLLSLDISYDWPIRQIDINNAFLHGVLSETIYMEQPTGFQVHGSY
Query: PLVCKLHKALYGLKQAPRAWFDRLNMFLQSLGFVNSRADTSLLFQKSGNICCNILVYMNDIIISGNSMAVVTSLIAKLNGRFSLKDLGPLSYFLEIEVSY
LVCKLHKALYGLKQAPRAW+DRL L S GF S+ D SL + +LVY++DI+++G+S ++ LIAKL+ +F+LK +G YFL IEV Y
Subjt: PLVCKLHKALYGLKQAPRAWFDRLNMFLQSLGFVNSRADTSLLFQKSGNICCNILVYMNDIIISGNSMAVVTSLIAKLNGRFSLKDLGPLSYFLEIEVSY
Query: PPSGDLFLSQAKYIMDLLQRTHMAEAKAISTPMI
PSG++ L+Q+KYI DLL R +MA+AK I+TPM+
Subjt: PPSGDLFLSQAKYIMDLLQRTHMAEAKAISTPMI
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| A0A2Z6N0R7 Integrase catalytic domain-containing protein | 1.4e-97 | 42.99 | Show/hide |
Query: HKGYKCPDSTGRTYISRHVLFYETCFP-----------------------FPNSSSKSVTNAPSIVSQQLSIVPSYVNDHAFVSLPTNSPLLSPLSNSQP
HKG+KC D++GR YIS+ V+F+E+ +P FP + ++ + P+ VSQQ + PS + ++P+ P S+S P
Subjt: HKGYKCPDSTGRTYISRHVLFYETCFP-----------------------FPNSSSKSVTNAPSIVSQQLSIVPSYVNDHAFVSLPTNSPLLSPLSNSQP
Query: ISRTSDTTSPSHLSPVPSATISSHETCPTQEAEPDTQPTHVDSISNHPMITRSKSGIFKPKVFLTTYVDFEPPNAKEALKCSHWKKAMQVEYDAQIQNKM
+ S ++ + S +SS P P + + +NH MITR K+G KPK+FL + EP + AL W KAMQ EY A + NK
Subjt: ISRTSDTTSPSHLSPVPSATISSHETCPTQEAEPDTQPTHVDSISNHPMITRSKSGIFKPKVFLTTYVDFEPPNAKEALKCSHWKKAMQVEYDAQIQNKM
Query: WELVPVPSNHKIVGCKWVFKIKRNSDRSISHYKARLVAKVFHQSADIDYFETFSPVVKPITIRVLLSLDISYDWPIRQIDINNAFLHGVLSETIYMEQPT
W LVP+P + K +GCKW+F++K N D +++ YKARLV K F Q+A D+ ETFSPV+KP+TIR++L+L +++ W I+QID+NNAFL+GVL E +YM QP+
Subjt: WELVPVPSNHKIVGCKWVFKIKRNSDRSISHYKARLVAKVFHQSADIDYFETFSPVVKPITIRVLLSLDISYDWPIRQIDINNAFLHGVLSETIYMEQPT
Query: GFQVHGSYPLVCKLHKALYGLKQAPRAWFDRLNMFLQSLGFVNSRADTSLLFQKSGNICCNILVYMNDIIISGNSMAVVTSLIAKLNGRFSLKDLGPLSY
GF+ LVCKLHK+LYGLKQAPRAW+D+L L +GFV SR D SLL C +L+YM+DI+I+G++ ++ LI KLN +F+LK LG + Y
Subjt: GFQVHGSYPLVCKLHKALYGLKQAPRAWFDRLNMFLQSLGFVNSRADTSLLFQKSGNICCNILVYMNDIIISGNSMAVVTSLIAKLNGRFSLKDLGPLSY
Query: FLEIEVSYPPSGDLFLSQAKYIMDLLQRTHMAEAKAISTPMI
FL +EV + PSG L L+Q KYI DLL + HM ++K + +PM+
Subjt: FLEIEVSYPPSGDLFLSQAKYIMDLLQRTHMAEAKAISTPMI
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 5.2e-46 | 34.85 | Show/hide |
Query: DSISNHPMITRSKSGIFKPKVFLTTYVDF-EPPNAKEALKC----SHWKKAMQVEYDAQIQNKMWELVPVPSNHKIVGCKWVFKIKRNSDRSISHYKARL
+ + P I+ ++ KV L + F + PN+ + ++ S W++A+ E +A N W + P N IV +WVF +K N + YKARL
Subjt: DSISNHPMITRSKSGIFKPKVFLTTYVDF-EPPNAKEALKC----SHWKKAMQVEYDAQIQNKMWELVPVPSNHKIVGCKWVFKIKRNSDRSISHYKARL
Query: VAKVFHQSADIDYFETFSPVVKPITIRVLLSLDISYDWPIRQIDINNAFLHGVLSETIYMEQPTGFQVHGSYPLVCKLHKALYGLKQAPRAWFDRLNMFL
VA+ F Q IDY ETF+PV + + R +LSL I Y+ + Q+D+ AFL+G L E IYM P G + VCKL+KA+YGLKQA R WF+ L
Subjt: VAKVFHQSADIDYFETFSPVVKPITIRVLLSLDISYDWPIRQIDINNAFLHGVLSETIYMEQPTGFQVHGSYPLVCKLHKALYGLKQAPRAWFDRLNMFL
Query: QSLGFVNSRADTSLLFQKSGNICCNI--LVYMNDIIISGNSMAVVTSLIAKLNGRFSLKDLGPLSYFLEIEVSYPPSGDLFLSQAKYIMDLLQRTHMAEA
+ FVNS D + GNI NI L+Y++D++I+ M + + L +F + DL + +F+ I + ++LSQ+ Y+ +L + +M
Subjt: QSLGFVNSRADTSLLFQKSGNICCNI--LVYMNDIIISGNSMAVVTSLIAKLNGRFSLKDLGPLSYFLEIEVSYPPSGDLFLSQAKYIMDLLQRTHMAEA
Query: KAISTPM
A+STP+
Subjt: KAISTPM
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.7e-57 | 35.83 | Show/hide |
Query: GYKCPDSTGRTYI-SRHVLFYETCFPFPNSSSKSVTNAPSIVSQQLSIVPSYVNDHAFVSLPTNSPLLSPLSNSQPISRTSDTTSPSHLSPVPSATISSH
GY+ D + I SR V+F E+ S+ V N I+P+ FV++P+ S + P S S T S P I
Subjt: GYKCPDSTGRTYI-SRHVLFYETCFPFPNSSSKSVTNAPSIVSQQLSIVPSYVNDHAFVSLPTNSPLLSPLSNSQPISRTSDTTSPSHLSPVPSATISSH
Query: ETCP--TQEAEPDTQPTHVDSISNHPMITRSKSGIFKPKVFLTTYVDFEPPNAKEAL---KCSHWKKAMQVEYDAQIQNKMWELVPVPSNHKIVGCKWVF
E +E E TQ R +S + ++ D EP + KE L + + KAMQ E ++ +N ++LV +P + + CKWVF
Subjt: ETCP--TQEAEPDTQPTHVDSISNHPMITRSKSGIFKPKVFLTTYVDFEPPNAKEAL---KCSHWKKAMQVEYDAQIQNKMWELVPVPSNHKIVGCKWVF
Query: KIKRNSDRSISHYKARLVAKVFHQSADIDYFETFSPVVKPITIRVLLSLDISYDWPIRQIDINNAFLHGVLSETIYMEQPTGFQVHGSYPLVCKLHKALY
K+K++ D + YKARLV K F Q ID+ E FSPVVK +IR +LSL S D + Q+D+ AFLHG L E IYMEQP GF+V G +VCKL+K+LY
Subjt: KIKRNSDRSISHYKARLVAKVFHQSADIDYFETFSPVVKPITIRVLLSLDISYDWPIRQIDINNAFLHGVLSETIYMEQPTGFQVHGSYPLVCKLHKALY
Query: GLKQAPRAWFDRLNMFLQSLGFVNSRADTSLLFQK-SGNICCNILVYMNDIIISGNSMAVVTSLIAKLNGRFSLKDLGPLSYFLEIE-VSYPPSGDLFLS
GLKQAPR W+ + + F++S ++ + +D + F++ S N +L+Y++D++I G ++ L L+ F +KDLGP L ++ V S L+LS
Subjt: GLKQAPRAWFDRLNMFLQSLGFVNSRADTSLLFQK-SGNICCNILVYMNDIIISGNSMAVVTSLIAKLNGRFSLKDLGPLSYFLEIE-VSYPPSGDLFLS
Query: QAKYIMDLLQRTHMAEAKAISTPMIGH
Q KYI +L+R +M AK +STP+ GH
Subjt: QAKYIMDLLQRTHMAEAKAISTPMIGH
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| P92520 Uncharacterized mitochondrial protein AtMg00820 | 8.7e-25 | 51.61 | Show/hide |
Query: MITRSKSGIFK--PK--VFLTTYVDFEPPNAKEALKCSHWKKAMQVEYDAQIQNKMWELVPVPSNHKIVGCKWVFKIKRNSDRSISHYKARLVAKVFHQS
M+TRSK+GI K PK + +TT + EP + ALK W +AMQ E DA +NK W LVP P N I+GCKWVFK K +SD ++ KARLVAK FHQ
Subjt: MITRSKSGIFK--PK--VFLTTYVDFEPPNAKEALKCSHWKKAMQVEYDAQIQNKMWELVPVPSNHKIVGCKWVFKIKRNSDRSISHYKARLVAKVFHQS
Query: ADIDYFETFSPVVKPITIRVLLSL
I + ET+SPVV+ TIR +L++
Subjt: ADIDYFETFSPVVKPITIRVLLSL
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 1.5e-77 | 38.59 | Show/hide |
Query: TGRTYISRHVLFYETCFPFPN------------SSSKSVTNAPSIVSQQLSIVPS-YVNDHAFVSLPTNSPLLSPLSNSQPISRTSDTT-----------
T R YISRHV F E CFPF N S V + + + + ++P+ +D + P +SP +P NSQ S D++
Subjt: TGRTYISRHVLFYETCFPFPN------------SSSKSVTNAPSIVSQQLSIVPS-YVNDHAFVSLPTNSPLLSPLSNSQPISRTSDTT-----------
Query: -----------------------------------SPSHL-------------SPVPSATISSHETCPTQEAEPDTQPTHVDSISN---------HPMIT
SPS L SP P+ + SS T PT + P + I N H M T
Subjt: -----------------------------------SPSHL-------------SPVPSATISSHETCPTQEAEPDTQPTHVDSISN---------HPMIT
Query: RSKSGIFKP----KVFLTTYVDFEPPNAKEALKCSHWKKAMQVEYDAQIQNKMWELVPVPSNH-KIVGCKWVFKIKRNSDRSISHYKARLVAKVFHQSAD
R+K+GI KP + ++ + EP A +ALK W+ AM E +AQI N W+LVP P +H IVGC+W+F K NSD S++ YKARLVAK ++Q
Subjt: RSKSGIFKP----KVFLTTYVDFEPPNAKEALKCSHWKKAMQVEYDAQIQNKMWELVPVPSNH-KIVGCKWVFKIKRNSDRSISHYKARLVAKVFHQSAD
Query: IDYFETFSPVVKPITIRVLLSLDISYDWPIRQIDINNAFLHGVLSETIYMEQPTGFQVHGSYPLVCKLHKALYGLKQAPRAWFDRLNMFLQSLGFVNSRA
+DY ETFSPV+K +IR++L + + WPIRQ+D+NNAFL G L++ +YM QP GF VCKL KALYGLKQAPRAW+ L +L ++GFVNS +
Subjt: IDYFETFSPVVKPITIRVLLSLDISYDWPIRQIDINNAFLHGVLSETIYMEQPTGFQVHGSYPLVCKLHKALYGLKQAPRAWFDRLNMFLQSLGFVNSRA
Query: DTSLLFQKSGNICCNILVYMNDIIISGNSMAVVTSLIAKLNGRFSLKDLGPLSYFLEIEVSYPPSGDLFLSQAKYIMDLLQRTHMAEAKAISTPM
DTSL + G +LVY++DI+I+GN ++ + + L+ RFS+KD L YFL IE P+G L LSQ +YI+DLL RT+M AK ++TPM
Subjt: DTSLLFQKSGNICCNILVYMNDIIISGNSMAVVTSLIAKLNGRFSLKDLGPLSYFLEIEVSYPPSGDLFLSQAKYIMDLLQRTHMAEAKAISTPM
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 2.9e-73 | 37.4 | Show/hide |
Query: TGRTYISRHVLFYETCFPFPNSS----------SKSVTNAPSIVSQQLSIV----PSYVNDHAFVS-LPTNSPLLSPLSNSQPIS-----------RTSD
TGR Y SRHV F E CFPF ++ S S N PS + + + P + H S P +SP SPL +Q S +S+
Subjt: TGRTYISRHVLFYETCFPFPNSS----------SKSVTNAPSIVSQQLSIV----PSYVNDHAFVS-LPTNSPLLSPLSNSQPIS-----------RTSD
Query: TTSPSHLSPVPSA----TISSHETCP-----------------------------------TQEAEPDTQPTHVDS---------------------ISN
T+PSH P P+A T +S+ P T +EP++ + S ++
Subjt: TTSPSHLSPVPSA----TISSHETCP-----------------------------------TQEAEPDTQPTHVDS---------------------ISN
Query: HPMITRSKSGIFKP----KVFLTTYVDFEPPNAKEALKCSHWKKAMQVEYDAQIQNKMWELV-PVPSNHKIVGCKWVFKIKRNSDRSISHYKARLVAKVF
H M TR+K GI KP + + EP A +A+K W++AM E +AQI N W+LV P P + IVGC+W+F K NSD S++ YKARLVAK +
Subjt: HPMITRSKSGIFKP----KVFLTTYVDFEPPNAKEALKCSHWKKAMQVEYDAQIQNKMWELV-PVPSNHKIVGCKWVFKIKRNSDRSISHYKARLVAKVF
Query: HQSADIDYFETFSPVVKPITIRVLLSLDISYDWPIRQIDINNAFLHGVLSETIYMEQPTGFQVHGSYPLVCKLHKALYGLKQAPRAWFDRLNMFLQSLGF
+Q +DY ETFSPV+K +IR++L + + WPIRQ+D+NNAFL G L++ +YM QP GF VC+L KA+YGLKQAPRAW+ L +L ++GF
Subjt: HQSADIDYFETFSPVVKPITIRVLLSLDISYDWPIRQIDINNAFLHGVLSETIYMEQPTGFQVHGSYPLVCKLHKALYGLKQAPRAWFDRLNMFLQSLGF
Query: VNSRADTSLLFQKSGNICCNILVYMNDIIISGNSMAVVTSLIAKLNGRFSLKDLGPLSYFLEIEVSYPPSGDLFLSQAKYIMDLLQRTHMAEAKAISTPM
VNS +DTSL + G +LVY++DI+I+GN ++ + L+ RFS+K+ L YFL IE P G L LSQ +Y +DLL RT+M AK ++TPM
Subjt: VNSRADTSLLFQKSGNICCNILVYMNDIIISGNSMAVVTSLIAKLNGRFSLKDLGPLSYFLEIEVSYPPSGDLFLSQAKYIMDLLQRTHMAEAKAISTPM
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | 5.7e-56 | 42.18 | Show/hide |
Query: EPPNAKEALKCSHWKKAMQVEYDAQIQNKMWELVPVPSNHKIVGCKWVFKIKRNSDRSISHYKARLVAKVFHQSADIDYFETFSPVVKPITIRVLLSLDI
EP EA + W AM E A WE+ +P N K +GCKWV+KIK NSD +I YKARLVAK + Q ID+ ETFSPV K +++++L++
Subjt: EPPNAKEALKCSHWKKAMQVEYDAQIQNKMWELVPVPSNHKIVGCKWVFKIKRNSDRSISHYKARLVAKVFHQSADIDYFETFSPVVKPITIRVLLSLDI
Query: SYDWPIRQIDINNAFLHGVLSETIYMEQPTGFQVHGSYPL----VCKLHKALYGLKQAPRAWFDRLNMFLQSLGFVNSRADTSLLFQKSGNICCNILVYM
Y++ + Q+DI+NAFL+G L E IYM+ P G+ L VC L K++YGLKQA R WF + ++ L GFV S +D + + + + +LVY+
Subjt: SYDWPIRQIDINNAFLHGVLSETIYMEQPTGFQVHGSYPL----VCKLHKALYGLKQAPRAWFDRLNMFLQSLGFVNSRADTSLLFQKSGNICCNILVYM
Query: NDIIISGNSMAVVTSLIAKLNGRFSLKDLGPLSYFLEIEVSYPPSGDLFLSQAKYIMDLLQRTHMAEAKAISTPM
+DIII N+ A V L ++L F L+DLGPL YFL +E++ +G + + Q KY +DLL T + K S PM
Subjt: NDIIISGNSMAVVTSLIAKLNGRFSLKDLGPLSYFLEIEVSYPPSGDLFLSQAKYIMDLLQRTHMAEAKAISTPM
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| ATMG00810.1 DNA/RNA polymerases superfamily protein | 4.6e-13 | 45 | Show/hide |
Query: ILVYMNDIIISGNSMAVVTSLIAKLNGRFSLKDLGPLSYFLEIEVSYPPSGDLFLSQAKYIMDLLQRTHMAEAKAISTPM
+L+Y++DI+++G+S ++ LI +L+ FS+KDLGP+ YFL I++ PSG LFLSQ KY +L M + K +STP+
Subjt: ILVYMNDIIISGNSMAVVTSLIAKLNGRFSLKDLGPLSYFLEIEVSYPPSGDLFLSQAKYIMDLLQRTHMAEAKAISTPM
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| ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase) | 6.2e-26 | 51.61 | Show/hide |
Query: MITRSKSGIFK--PK--VFLTTYVDFEPPNAKEALKCSHWKKAMQVEYDAQIQNKMWELVPVPSNHKIVGCKWVFKIKRNSDRSISHYKARLVAKVFHQS
M+TRSK+GI K PK + +TT + EP + ALK W +AMQ E DA +NK W LVP P N I+GCKWVFK K +SD ++ KARLVAK FHQ
Subjt: MITRSKSGIFK--PK--VFLTTYVDFEPPNAKEALKCSHWKKAMQVEYDAQIQNKMWELVPVPSNHKIVGCKWVFKIKRNSDRSISHYKARLVAKVFHQS
Query: ADIDYFETFSPVVKPITIRVLLSL
I + ET+SPVV+ TIR +L++
Subjt: ADIDYFETFSPVVKPITIRVLLSL
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