; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0008446 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0008446
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr9:21983981..21986958
RNA-Seq ExpressionLag0008446
SyntenyLag0008446
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_023813558.1 soluble scavenger receptor cysteine-rich domain-containing protein SSC5D isoform X1 [Oryzias latipes]1.3e-0444.76Show/hide
Query:  FSHALLQVLPPSSKVPSRASLAPSPSSKALLSTAPSPSSKALLSVATFLQVRRFSHALLQFLPPSSKVPSRASLAPSPSSKALLSTTPSPSSKALLSVAT
        +S   LQ   PS    +  S  PSPS     STAPSPS+K  LS A                P  S+ PS  S+APSPS+K  LS TPSP      SVA 
Subjt:  FSHALLQVLPPSSKVPSRASLAPSPSSKALLSTAPSPSSKALLSVATFLQVRRFSHALLQFLPPSSKVPSRASLAPSPSSKALLSTTPSPSSKALLSVAT

Query:  SPSSKVLLSTAPSPSSKALLSTAPSPSSKVLLS-TPLFEGSPL
        S S+K  LST PSPS+   LST PSPS+   LS TP     PL
Subjt:  SPSSKVLLSTAPSPSSKALLSTAPSPSSKVLLS-TPLFEGSPL

XP_023813559.1 soluble scavenger receptor cysteine-rich domain-containing protein SSC5D isoform X2 [Oryzias latipes]1.3e-0444.76Show/hide
Query:  FSHALLQVLPPSSKVPSRASLAPSPSSKALLSTAPSPSSKALLSVATFLQVRRFSHALLQFLPPSSKVPSRASLAPSPSSKALLSTTPSPSSKALLSVAT
        +S   LQ   PS    +  S  PSPS     STAPSPS+K  LS A                P  S+ PS  S+APSPS+K  LS TPSP      SVA 
Subjt:  FSHALLQVLPPSSKVPSRASLAPSPSSKALLSTAPSPSSKALLSVATFLQVRRFSHALLQFLPPSSKVPSRASLAPSPSSKALLSTTPSPSSKALLSVAT

Query:  SPSSKVLLSTAPSPSSKALLSTAPSPSSKVLLS-TPLFEGSPL
        S S+K  LST PSPS+   LST PSPS+   LS TP     PL
Subjt:  SPSSKVLLSTAPSPSSKALLSTAPSPSSKVLLS-TPLFEGSPL

XP_023813560.1 early nodulin-like protein 2 isoform X3 [Oryzias latipes]1.3e-0444.76Show/hide
Query:  FSHALLQVLPPSSKVPSRASLAPSPSSKALLSTAPSPSSKALLSVATFLQVRRFSHALLQFLPPSSKVPSRASLAPSPSSKALLSTTPSPSSKALLSVAT
        +S   LQ   PS    +  S  PSPS     STAPSPS+K  LS A                P  S+ PS  S+APSPS+K  LS TPSP      SVA 
Subjt:  FSHALLQVLPPSSKVPSRASLAPSPSSKALLSTAPSPSSKALLSVATFLQVRRFSHALLQFLPPSSKVPSRASLAPSPSSKALLSTTPSPSSKALLSVAT

Query:  SPSSKVLLSTAPSPSSKALLSTAPSPSSKVLLS-TPLFEGSPL
        S S+K  LST PSPS+   LST PSPS+   LS TP     PL
Subjt:  SPSSKVLLSTAPSPSSKALLSTAPSPSSKVLLS-TPLFEGSPL

XP_035452609.1 zinc finger MYM-type protein 3-like isoform X1 [Spodoptera frugiperda]6.9e-0631.96Show/hide
Query:  PPNSKASKVLTRCDSLQFLPPSSKVLMHFAAQFLPPSSKVLMRFVATFLQVRRFSHALLQVLPPSSKVPSRASLAPSPSSKALLSTAPSPSSKALL----
        PP S ++ +  R        PS+K    F A   PPS+K       TF  +R  S       PP     +  +++P PS+K L + +P PS+K L     
Subjt:  PPNSKASKVLTRCDSLQFLPPSSKVLMHFAAQFLPPSSKVLMRFVATFLQVRRFSHALLQVLPPSSKVPSRASLAPSPSSKALLSTAPSPSSKALL----

Query:  SVATF-LQVRRFSHALLQFLPPSSKVPSRASLAPSPSSKALLSTTPSPSSKALLSVATSPSSKVLLSTAPSPSSKALLSTAPSPSSKVLLSTPL
        S  TF  ++ R S   L  + P     +  +++P PS+K L + +P PS+K L ++++ PS+K L +  P PS+K L +  P PS+K L  TP+
Subjt:  SVATF-LQVRRFSHALLQFLPPSSKVPSRASLAPSPSSKALLSTTPSPSSKALLSVATSPSSKVLLSTAPSPSSKALLSTAPSPSSKVLLSTPL

XP_035452614.1 zinc finger MYM-type protein 3-like isoform X6 [Spodoptera frugiperda]6.9e-0631.96Show/hide
Query:  PPNSKASKVLTRCDSLQFLPPSSKVLMHFAAQFLPPSSKVLMRFVATFLQVRRFSHALLQVLPPSSKVPSRASLAPSPSSKALLSTAPSPSSKALL----
        PP S ++ +  R        PS+K    F A   PPS+K       TF  +R  S       PP     +  +++P PS+K L + +P PS+K L     
Subjt:  PPNSKASKVLTRCDSLQFLPPSSKVLMHFAAQFLPPSSKVLMRFVATFLQVRRFSHALLQVLPPSSKVPSRASLAPSPSSKALLSTAPSPSSKALL----

Query:  SVATF-LQVRRFSHALLQFLPPSSKVPSRASLAPSPSSKALLSTTPSPSSKALLSVATSPSSKVLLSTAPSPSSKALLSTAPSPSSKVLLSTPL
        S  TF  ++ R S   L  + P     +  +++P PS+K L + +P PS+K L ++++ PS+K L +  P PS+K L +  P PS+K L  TP+
Subjt:  SVATF-LQVRRFSHALLQFLPPSSKVPSRASLAPSPSSKALLSTTPSPSSKALLSVATSPSSKVLLSTAPSPSSKALLSTAPSPSSKVLLSTPL

TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAGGAAGTTCTTTGTTCTCATAAATACAGAAGGTTCCTTGAAGGTGAAACCAAATCTCATTATCTTGACCAATCCTACAAGGCAAGGACTGATCAAGACCATGAT
GAAGATAAGAGCTTTTAAAATGTTCTTCGTTGTATCTACTGTGTTGTTCCTTCTCCAAGTTCGAGGTTCTCAGTTGTACGACTGCTACGTTGTTCCTCCTCCAAGTGCGA
AGGATCTTATGTGGTGCGTTGTTGCATTGTTCCTTCTTCTCTCAATTCGATGGTTCTCACGCAGCTTTGCTGGAGTTCTTCTCCCCAAGTTTGAAGGTTCTCACGCGCTC
CGTTGCAGTTCCTTCTTTCCAAGGTCGAAGGTTCTCACTCGCTGCGTTGCAGTTCTTTCTCCCAAGTTCGAAGGTTCACGCACTTCGCTACAGTTCCTTCTCCCAAATTC
GAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTGCACTGCTGCAGTTCATTCTTCCAAGTTCGAAGGTTCTCACGTCGCTTCACTGCAGTT
CCTTCCTCCAAGTTCGAAGGTTCTCACGTGCTTCGCTGCAGTTCCTTCTCTCCAAGGTCGAAGGTTCTCACGCGCTGCGTTGCAGTTCTTTGTCCCCAAGTTCGAAGGTT
CACGCACTTCGCTGCAGTTCCTTCTCCCAAATTCAAGGTTCTTCGCTGCAGTTCCTTCCTCCAAATTCGAAGGCTTCGAAGGTTCTCACGCGCTGTGATTCGTTGCAGTT
CCTTCCTCCAAGTTCGAAGGTTCTCATGCACTTCGCTGCACAGTTCCTTCCTCCAAGTTCGAAGGTTCTCATGCGCTTCGTTGCTACCTTCCTCCAAGTTCGAAGGTTCT
CTCACGCACTGCTGCAGGTCCTTCCTCCAAGTTCGAAGGTTCCCTCACGCGCTTCGCTCGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCACTGCTCCTTCTCCAAGT
TCGAAGGCGCTTCTCTCCGTTGCTACCTTCCTCCAAGTTCGAAGGTTCTCTCACGCGCTGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCCCTCACGTGCTTCGCTCGC
TCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCACTACTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCGTTGCTACTTCTCCAAGTTCGAAGGTGCTTCTCTCCACTGCTC
CTTCTCCAAGTTCGAAGGCGCTTCTCTCCACTGCTCCTTCTCCAAGTTCGAAGGTGCTTCTCTCCACCCCTCTTTTTGAAGGTTCGCCACTGAGGTTCTCCTTCTCCAAG
TTCGAAGGTTCACCGTTGCTCCTTTTCAAATGTTTGGCGGCGGTTGACGTCCTCGTTCCGCTTCATCTTCAAATGTTGGTAGTTGACGGCGTCCGTTGCGCTTCATCTTC
AAATGTTGGCCGAAACTACAGTCATCAAAGTGACAGGTCTAGACAGGTGGTGAAGTCACTGCAATTGAATCTGATGACGACCGATGTAGGCGAGTCGGGTCTGGTGACCA
CCCCTGCAGGTTACTCAATCACCAATAAAATGGGGACTGGTCTAGCAGGAGTGCATCACTGTAGGCAAATCTGGAGTGCATCACTGAAGGCGAATCTGGTGACTACCCCT
GCAGGTTACTCAGATCACCCAATAAAATGGGACTGGTCTAGCAAGAGTGCATCACTGAAAATCTGGAGTGCATCACTGAAGGCGAATCTGGTGACTACCCCTGCAGGTTA
CTCAGATCACCCAATAAAATGGGGACTGGTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGAGGAAGTTCTTTGTTCTCATAAATACAGAAGGTTCCTTGAAGGTGAAACCAAATCTCATTATCTTGACCAATCCTACAAGGCAAGGACTGATCAAGACCATGAT
GAAGATAAGAGCTTTTAAAATGTTCTTCGTTGTATCTACTGTGTTGTTCCTTCTCCAAGTTCGAGGTTCTCAGTTGTACGACTGCTACGTTGTTCCTCCTCCAAGTGCGA
AGGATCTTATGTGGTGCGTTGTTGCATTGTTCCTTCTTCTCTCAATTCGATGGTTCTCACGCAGCTTTGCTGGAGTTCTTCTCCCCAAGTTTGAAGGTTCTCACGCGCTC
CGTTGCAGTTCCTTCTTTCCAAGGTCGAAGGTTCTCACTCGCTGCGTTGCAGTTCTTTCTCCCAAGTTCGAAGGTTCACGCACTTCGCTACAGTTCCTTCTCCCAAATTC
GAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTGCACTGCTGCAGTTCATTCTTCCAAGTTCGAAGGTTCTCACGTCGCTTCACTGCAGTT
CCTTCCTCCAAGTTCGAAGGTTCTCACGTGCTTCGCTGCAGTTCCTTCTCTCCAAGGTCGAAGGTTCTCACGCGCTGCGTTGCAGTTCTTTGTCCCCAAGTTCGAAGGTT
CACGCACTTCGCTGCAGTTCCTTCTCCCAAATTCAAGGTTCTTCGCTGCAGTTCCTTCCTCCAAATTCGAAGGCTTCGAAGGTTCTCACGCGCTGTGATTCGTTGCAGTT
CCTTCCTCCAAGTTCGAAGGTTCTCATGCACTTCGCTGCACAGTTCCTTCCTCCAAGTTCGAAGGTTCTCATGCGCTTCGTTGCTACCTTCCTCCAAGTTCGAAGGTTCT
CTCACGCACTGCTGCAGGTCCTTCCTCCAAGTTCGAAGGTTCCCTCACGCGCTTCGCTCGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCACTGCTCCTTCTCCAAGT
TCGAAGGCGCTTCTCTCCGTTGCTACCTTCCTCCAAGTTCGAAGGTTCTCTCACGCGCTGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCCCTCACGTGCTTCGCTCGC
TCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCACTACTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCGTTGCTACTTCTCCAAGTTCGAAGGTGCTTCTCTCCACTGCTC
CTTCTCCAAGTTCGAAGGCGCTTCTCTCCACTGCTCCTTCTCCAAGTTCGAAGGTGCTTCTCTCCACCCCTCTTTTTGAAGGTTCGCCACTGAGGTTCTCCTTCTCCAAG
TTCGAAGGTTCACCGTTGCTCCTTTTCAAATGTTTGGCGGCGGTTGACGTCCTCGTTCCGCTTCATCTTCAAATGTTGGTAGTTGACGGCGTCCGTTGCGCTTCATCTTC
AAATGTTGGCCGAAACTACAGTCATCAAAGTGACAGGTCTAGACAGGTGGTGAAGTCACTGCAATTGAATCTGATGACGACCGATGTAGGCGAGTCGGGTCTGGTGACCA
CCCCTGCAGGTTACTCAATCACCAATAAAATGGGGACTGGTCTAGCAGGAGTGCATCACTGTAGGCAAATCTGGAGTGCATCACTGAAGGCGAATCTGGTGACTACCCCT
GCAGGTTACTCAGATCACCCAATAAAATGGGACTGGTCTAGCAAGAGTGCATCACTGAAAATCTGGAGTGCATCACTGAAGGCGAATCTGGTGACTACCCCTGCAGGTTA
CTCAGATCACCCAATAAAATGGGGACTGGTCTAG
Protein sequenceShow/hide protein sequence
MKRKFFVLINTEGSLKVKPNLIILTNPTRQGLIKTMMKIRAFKMFFVVSTVLFLLQVRGSQLYDCYVVPPPSAKDLMWCVVALFLLLSIRWFSRSFAGVLLPKFEGSHAL
RCSSFFPRSKVLTRCVAVLSPKFEGSRTSLQFLLPNSKVLTRFAAVPSSKFEGSALLQFILPSSKVLTSLHCSSFLQVRRFSRASLQFLLSKVEGSHALRCSSLSPSSKV
HALRCSSFSQIQGSSLQFLPPNSKASKVLTRCDSLQFLPPSSKVLMHFAAQFLPPSSKVLMRFVATFLQVRRFSHALLQVLPPSSKVPSRASLAPSPSSKALLSTAPSPS
SKALLSVATFLQVRRFSHALLQFLPPSSKVPSRASLAPSPSSKALLSTTPSPSSKALLSVATSPSSKVLLSTAPSPSSKALLSTAPSPSSKVLLSTPLFEGSPLRFSFSK
FEGSPLLLFKCLAAVDVLVPLHLQMLVVDGVRCASSSNVGRNYSHQSDRSRQVVKSLQLNLMTTDVGESGLVTTPAGYSITNKMGTGLAGVHHCRQIWSASLKANLVTTP
AGYSDHPIKWDWSSKSASLKIWSASLKANLVTTPAGYSDHPIKWGLV