| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0026238.1 gag/pol protein [Cucumis melo var. makuwa] | 9.2e-19 | 45.22 | Show/hide |
Query: MGLFEAQVVILDDEIVDSLSFRKKMNDVDKDQWFKAMDLEMKSLYFNSIWDLVH-----------------------LLDGFDTVIRSFGFNQDIDESCI
+GL EAQ++I DD I D L++++ MNDVD DQW K MDLEM+S+Y NS+W LV +GFDT ++S+GF Q +DE C+
Subjt: MGLFEAQVVILDDEIVDSLSFRKKMNDVDKDQWFKAMDLEMKSLYFNSIWDLVH-----------------------LLDGFDTVIRSFGFNQDIDESCI
Query: YEKIVSSTVAFFMLY
Y++I++STVAF +LY
Subjt: YEKIVSSTVAFFMLY
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| KAA0040928.1 gag/pol protein [Cucumis melo var. makuwa] | 9.9e-21 | 42.44 | Show/hide |
Query: MGLFEAQVVILDDEIVDSLSFRKKMNDVDKDQWFKAMDLEMKSLYFNSIWDLVHLLDGFDTVIRSFGFNQDIDESCIYEKIVSSTVAFFMLYE-----MQ
+GL EAQ +I DD I D L+F++ MNDVD QW KAMDLEM+S+Y NSIW LV N ++DE C+Y++I+SSTVAF +LY +
Subjt: MGLFEAQVVILDDEIVDSLSFRKKMNDVDKDQWFKAMDLEMKSLYFNSIWDLVHLLDGFDTVIRSFGFNQDIDESCIYEKIVSSTVAFFMLYE-----MQ
Query: NSMKG------SRPFRVELFCLRNCVLRHLKELRNALCNRQCQ------YTDTDVLTGKDLMKSTSVSVFTL
N + G S P R ++N +L++LK ++ + + YTD+D T KD KSTS SVFTL
Subjt: NSMKG------SRPFRVELFCLRNCVLRHLKELRNALCNRQCQ------YTDTDVLTGKDLMKSTSVSVFTL
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| KAA0046800.1 gag/pol protein [Cucumis melo var. makuwa] | 3.2e-19 | 45.6 | Show/hide |
Query: MGLFEAQVVILDDEIVDSLSFRKKMNDVDKDQWFKAMDLEMKSLYFNSIWDLVHLLDG---------------------------------FDTVIRSFG
+GL E QVVI DD I D L F++ MNDVDKDQW KAMDLEMKS+YFNS+W+LV L +G FD I+S+G
Subjt: MGLFEAQVVILDDEIVDSLSFRKKMNDVDKDQWFKAMDLEMKSLYFNSIWDLVHLLDG---------------------------------FDTVIRSFG
Query: FNQDIDESCIYEKIVSSTVAFFMLY
F++++DE C+Y+KI VAF +LY
Subjt: FNQDIDESCIYEKIVSSTVAFFMLY
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| TYK04889.1 retrovirus-related pol polyprotein from transposon tnt 1-94 [Cucumis melo var. makuwa] | 1.9e-19 | 32.33 | Show/hide |
Query: MGLFEAQVVILDDEIVDSLSFRKKMNDVDKDQWFKAMDLEMKSLYFNSIWDLVHLLDG------------------------------------------
+GL E QVVI DD + D LS+++ MNDVDKDQW KAMDLEM+S+YFN +W+LV L +G
Subjt: MGLFEAQVVILDDEIVDSLSFRKKMNDVDKDQWFKAMDLEMKSLYFNSIWDLVHLLDG------------------------------------------
Query: ----------FDTVIRSFGFNQDIDESCIYEKIVSSTVAFFMLY-----------------------EMQNSMKGSRPFRVELFCLRNCVLR--HLKELR
FDT I+S+GF+Q++DE C+Y+KI VAF +LY + Q G + C + ++++R
Subjt: ----------FDTVIRSFGFNQDIDESCIYEKIVSSTVAFFMLY-----------------------EMQNSMKGSRPFRVELFCLRNCVLR--HLKELR
Query: NALCNRQCQYTDTDVLTGKDLMKSTSVSVFTL
YTD D T KD KSTS S+FTL
Subjt: NALCNRQCQYTDTDVLTGKDLMKSTSVSVFTL
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| TYK07531.1 retrovirus-related pol polyprotein from transposon tnt 1-94 [Cucumis melo var. makuwa] | 4.6e-18 | 37.13 | Show/hide |
Query: MGLFEAQVVILDDEIVDSLSFRKKMNDVDKDQWFKAMDLEMKSLYFNSIWDLVHLLD--GFDTVIRSFGFNQDIDESCIYEKIVSSTVAFFML----YEM
+GL EAQ++I DD I D L++++ MNDVD DQW K MDLEM+S+Y N +W L+ G +++ F Q++DE C+ +KI++STV+F +L Y +
Subjt: MGLFEAQVVILDDEIVDSLSFRKKMNDVDKDQWFKAMDLEMKSLYFNSIWDLVHLLD--GFDTVIRSFGFNQDIDESCIYEKIVSSTVAFFML----YEM
Query: QNSMKGSRPFRVELFCLRNCVLRHLKELRNALCNRQCQ------YTDTDVLTGKDLMKSTSVSVFTL
K + + +L++L+ +++ + + YTD D T KD KSTS VFTL
Subjt: QNSMKGSRPFRVELFCLRNCVLRHLKELRNALCNRQCQ------YTDTDVLTGKDLMKSTSVSVFTL
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7TUI8 Gag/pol protein | 1.5e-19 | 45.6 | Show/hide |
Query: MGLFEAQVVILDDEIVDSLSFRKKMNDVDKDQWFKAMDLEMKSLYFNSIWDLVHLLDG---------------------------------FDTVIRSFG
+GL E QVVI DD I D L F++ MNDVDKDQW KAMDLEMKS+YFNS+W+LV L +G FD I+S+G
Subjt: MGLFEAQVVILDDEIVDSLSFRKKMNDVDKDQWFKAMDLEMKSLYFNSIWDLVHLLDG---------------------------------FDTVIRSFG
Query: FNQDIDESCIYEKIVSSTVAFFMLY
F++++DE C+Y+KI VAF +LY
Subjt: FNQDIDESCIYEKIVSSTVAFFMLY
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| A0A5A7V786 Gag/pol protein | 2.2e-18 | 35.27 | Show/hide |
Query: MGLFEAQVVILDDEIVDSLSFRKKMNDVDKDQWFKAMDLEMKSLYFNSIWDLVHLLDGFDT--------------VIRSFGFNQD------IDESCIYEK
+GL E Q++I DD I D L+F++ MNDVD DQW K MDLEM+S+Y NS+W LV + D +++ GF Q +DE C+Y++
Subjt: MGLFEAQVVILDDEIVDSLSFRKKMNDVDKDQWFKAMDLEMKSLYFNSIWDLVHLLDGFDT--------------VIRSFGFNQD------IDESCIYEK
Query: IVSSTVAFFMLY-----------------------EMQNSMKGSRPFRVELFCLRNCVLRHLKELRN------ALCNRQ---CQYTDTDVLTGKDLMKST
I++STVAF +LY Q G+ + + + +RN V LK LR A ++ YTD++ T KD KST
Subjt: IVSSTVAFFMLY-----------------------EMQNSMKGSRPFRVELFCLRNCVLRHLKELRN------ALCNRQ---CQYTDTDVLTGKDLMKST
Query: SVSVFTL
S SVFTL
Subjt: SVSVFTL
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| A0A5D3C3C9 Retrovirus-related pol polyprotein from transposon tnt 1-94 | 9.0e-20 | 32.33 | Show/hide |
Query: MGLFEAQVVILDDEIVDSLSFRKKMNDVDKDQWFKAMDLEMKSLYFNSIWDLVHLLDG------------------------------------------
+GL E QVVI DD + D LS+++ MNDVDKDQW KAMDLEM+S+YFN +W+LV L +G
Subjt: MGLFEAQVVILDDEIVDSLSFRKKMNDVDKDQWFKAMDLEMKSLYFNSIWDLVHLLDG------------------------------------------
Query: ----------FDTVIRSFGFNQDIDESCIYEKIVSSTVAFFMLY-----------------------EMQNSMKGSRPFRVELFCLRNCVLR--HLKELR
FDT I+S+GF+Q++DE C+Y+KI VAF +LY + Q G + C + ++++R
Subjt: ----------FDTVIRSFGFNQDIDESCIYEKIVSSTVAFFMLY-----------------------EMQNSMKGSRPFRVELFCLRNCVLR--HLKELR
Query: NALCNRQCQYTDTDVLTGKDLMKSTSVSVFTL
YTD D T KD KSTS S+FTL
Subjt: NALCNRQCQYTDTDVLTGKDLMKSTSVSVFTL
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| A0A5D3CK74 Gag/pol protein | 4.8e-21 | 42.44 | Show/hide |
Query: MGLFEAQVVILDDEIVDSLSFRKKMNDVDKDQWFKAMDLEMKSLYFNSIWDLVHLLDGFDTVIRSFGFNQDIDESCIYEKIVSSTVAFFMLYE-----MQ
+GL EAQ +I DD I D L+F++ MNDVD QW KAMDLEM+S+Y NSIW LV N ++DE C+Y++I+SSTVAF +LY +
Subjt: MGLFEAQVVILDDEIVDSLSFRKKMNDVDKDQWFKAMDLEMKSLYFNSIWDLVHLLDGFDTVIRSFGFNQDIDESCIYEKIVSSTVAFFMLYE-----MQ
Query: NSMKG------SRPFRVELFCLRNCVLRHLKELRNALCNRQCQ------YTDTDVLTGKDLMKSTSVSVFTL
N + G S P R ++N +L++LK ++ + + YTD+D T KD KSTS SVFTL
Subjt: NSMKG------SRPFRVELFCLRNCVLRHLKELRNALCNRQCQ------YTDTDVLTGKDLMKSTSVSVFTL
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| A0A5D3E5X8 Gag/pol protein | 4.5e-19 | 45.22 | Show/hide |
Query: MGLFEAQVVILDDEIVDSLSFRKKMNDVDKDQWFKAMDLEMKSLYFNSIWDLVH-----------------------LLDGFDTVIRSFGFNQDIDESCI
+GL EAQ++I DD I D L++++ MNDVD DQW K MDLEM+S+Y NS+W LV +GFDT ++S+GF Q +DE C+
Subjt: MGLFEAQVVILDDEIVDSLSFRKKMNDVDKDQWFKAMDLEMKSLYFNSIWDLVH-----------------------LLDGFDTVIRSFGFNQDIDESCI
Query: YEKIVSSTVAFFMLY
Y++I++STVAF +LY
Subjt: YEKIVSSTVAFFMLY
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