; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0008468 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0008468
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase
Genome locationchr9:22507408..22507998
RNA-Seq ExpressionLag0008468
SyntenyLag0008468
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_023874613.1 uncharacterized protein LOC111987139 [Quercus suber]5.0e-3041.55Show/hide
Query:  MASLTNALNKLTSSKVVKSISTLAEGYLKKENHDV--EEIQYVGNRAFS---QGVPNFYHPSLRNHENFSYSNTKNVLQPLPGFASSSVPEKKSNLEEMV
        +ASL++ ++ LT+ ++ +    +A   +    ++   E++QY+ NR ++     +PN+YHP LRNHENFSY NTKNVLQP PGF  S   EKK +LE+ +
Subjt:  MASLTNALNKLTSSKVVKSISTLAEGYLKKENHDV--EEIQYVGNRAFS---QGVPNFYHPSLRNHENFSYSNTKNVLQPLPGFASSSVPEKKSNLEEMV

Query:  VMFIKEQKVLNV-------NFQTIVNNHDTTLTNTEVQIGQIASAVNALHKGKFPSDTETNPREQCKMVTLRSGRQLEVSLEK--------------KLK
        V F++E K           N +T  +N   T+ N EVQIGQ+A+ +NA  +G FPS+TE NP+EQCK +TLRSGR++E S  K              K K
Subjt:  VMFIKEQKVLNV-------NFQTIVNNHDTTLTNTEVQIGQIASAVNALHKGKFPSDTETNPREQCKMVTLRSGRQLEVSLEK--------------KLK

Query:  KEENSIDEDGRDETQKASS
         EE  I ED   ET    S
Subjt:  KEENSIDEDGRDETQKASS

XP_023881727.1 uncharacterized protein LOC111994101 [Quercus suber]6.5e-3043.55Show/hide
Query:  MASLTNALNKLTSSKVVKSISTLAEGYLKKENHDV--EEIQYVGNRAFS---QGVPNFYHPSLRNHENFSYSNTKNVLQPLPGFASSSVPEKKSNLEEMV
        +ASL++ ++ LT+ ++ +S   +A   +    ++   E++QY+ NR ++     +PN+YHP LRNHENFSY NTKNVLQPL GF  S   EKK +LE+ +
Subjt:  MASLTNALNKLTSSKVVKSISTLAEGYLKKENHDV--EEIQYVGNRAFS---QGVPNFYHPSLRNHENFSYSNTKNVLQPLPGFASSSVPEKKSNLEEMV

Query:  VMFIKEQKVLNV-------NFQTIVNNHDTTLTNTEVQIGQIASAVNALHKGKFPSDTETNPREQCKMVTLRSGRQLEVSLEKKLK
        V F++E K           N +T  +N   T+ N EVQIGQ+A+ +NA  +G FPS+ E NP+EQCK +TLRSGR++E  L    K
Subjt:  VMFIKEQKVLNV-------NFQTIVNNHDTTLTNTEVQIGQIASAVNALHKGKFPSDTETNPREQCKMVTLRSGRQLEVSLEKKLK

XP_023889786.1 uncharacterized protein LOC112001854 [Quercus suber]6.5e-3044.57Show/hide
Query:  MASLTNALNKLTSSKVVKSISTLAEGYLKKENHDV--EEIQYVGNRAFS---QGVPNFYHPSLRNHENFSYSNTKNVLQPLPGFASSSVPEKKSNLEEMV
        +ASL+  +  LT+ ++ +S   +A   +    ++   E +QY+ N+  +     +PN+YHP LRNHENFSY NTKNVLQP PGF  S   EKK +LE+ +
Subjt:  MASLTNALNKLTSSKVVKSISTLAEGYLKKENHDV--EEIQYVGNRAFS---QGVPNFYHPSLRNHENFSYSNTKNVLQPLPGFASSSVPEKKSNLEEMV

Query:  VMFIKEQKV-------LNVNFQTIVNNHDTTLTNTEVQIGQIASAVNALHKGKFPSDTETNPREQCKMVTLRSGRQLEVSLEKK
        V F++E K        L  N +T  +N   T+ N EVQIGQ+A+ +NA  +G FPS+TE NP+EQCK +TLRSGR++E S  K+
Subjt:  VMFIKEQKV-------LNVNFQTIVNNHDTTLTNTEVQIGQIASAVNALHKGKFPSDTETNPREQCKMVTLRSGRQLEVSLEKK

XP_023903214.1 uncharacterized protein LOC112015077 [Quercus suber]2.9e-3041.55Show/hide
Query:  MASLTNALNKLTSSKVVKSISTLAEGYLKKENHDV--EEIQYVGNRAFS---QGVPNFYHPSLRNHENFSYSNTKNVLQPLPGFASSSVPEKKSNLEEMV
        +ASL++ ++ L++ ++ +S   +A   +    ++   E++QY+ NR ++     +PN+YHP LRNHENFSY NTKNVLQP PGF  S   EKK +LE+ +
Subjt:  MASLTNALNKLTSSKVVKSISTLAEGYLKKENHDV--EEIQYVGNRAFS---QGVPNFYHPSLRNHENFSYSNTKNVLQPLPGFASSSVPEKKSNLEEMV

Query:  VMFIKEQKVLNV-------NFQTIVNNHDTTLTNTEVQIGQIASAVNALHKGKFPSDTETNPREQCKMVTLRSGRQLEVSLEK--------------KLK
        V F++E K           N +T  +N   T+ N EVQIGQ+A+ +NA  +G FPS+TE NP+EQCK +TLRSGR++E S  K              K K
Subjt:  VMFIKEQKVLNV-------NFQTIVNNHDTTLTNTEVQIGQIASAVNALHKGKFPSDTETNPREQCKMVTLRSGRQLEVSLEK--------------KLK

Query:  KEENSIDEDGRDETQKASS
         EE  I ED   ET    S
Subjt:  KEENSIDEDGRDETQKASS

XP_030969898.1 uncharacterized protein LOC115990189 [Quercus lobata]1.9e-2942.47Show/hide
Query:  MASLTNALNKLTSSKVVKSISTLAEGYLKKENHDV--EEIQYVGNRAFS---QGVPNFYHPSLRNHENFSYSNTKNVLQPLPGFASSSVPEKKSNLEEMV
        +ASL+  ++ LT+ ++ +S   +A   +    ++   E++QY+ NR ++     +PN+YHP LRNHENFSY NTKNVLQP PGF  S   EKK +LE+ +
Subjt:  MASLTNALNKLTSSKVVKSISTLAEGYLKKENHDV--EEIQYVGNRAFS---QGVPNFYHPSLRNHENFSYSNTKNVLQPLPGFASSSVPEKKSNLEEMV

Query:  VMFIKEQKVLNV-------NFQTIVNNHDTTLTNTEVQIGQIASAVNALHKGKFPSDTETNPREQCKMVTLRSGRQLEVSLEKKLK
        + F++E K           N +T  +N   T+ N EVQIGQ+A+ +NA  +G F S+TE NP+EQCK +TLRSGR++E +  K+++
Subjt:  VMFIKEQKVLNV-------NFQTIVNNHDTTLTNTEVQIGQIASAVNALHKGKFPSDTETNPREQCKMVTLRSGRQLEVSLEKKLK

TrEMBL top hitse value%identityAlignment
A0A2I4FP56 uncharacterized protein LOC1090008378.4e-2339.38Show/hide
Query:  MASLTNALNKLTSSKVVKSISTLAEGYLKKENHDV--EEIQYVGNRAFS---QGVPNFYHPSLRNHENFSYSNTKNVLQPLP--GFASSSVPEKKSNLEE
        +A+L++ ++ L + ++ +S   +A   +   +++   E++QY+ N+ ++     +PN +HP LRNHEN SY NTKNVLQP P  GF S S  +KK +LE 
Subjt:  MASLTNALNKLTSSKVVKSISTLAEGYLKKENHDV--EEIQYVGNRAFS---QGVPNFYHPSLRNHENFSYSNTKNVLQPLP--GFASSSVPEKKSNLEE

Query:  MVVMFI-------KEQKVLNVNFQTIVNNHDTTLTNTEVQIGQIASAVNALHKGKFPSDTETNPREQCKMVTLRSGRQLEVSLEKKLKKEENS
         ++ F+       KE      N +T  +N    + N EVQIGQ+A+ +NA  +  FPS+TE NP EQ K +TLRSGR+    +EK   KE NS
Subjt:  MVVMFI-------KEQKVLNVNFQTIVNNHDTTLTNTEVQIGQIASAVNALHKGKFPSDTETNPREQCKMVTLRSGRQLEVSLEKKLKKEENS

A0A2I4G4Q3 uncharacterized protein LOC1090047121.6e-2640.84Show/hide
Query:  MASLTNALNKLTSSKVVKSISTLAEGYLKKENHDV--EEIQYVGNRAFS---QGVPNFYHPSLRNHENFSYSNTKNVLQPL--PGFASSSVPEKKSNLEE
        +A+L++ ++ LT+ ++ +S   +    +   +++V  E++QY+ NR ++     +PN+YHP  +NHEN SY NTKNVLQP   PGF S S  EKK +LE+
Subjt:  MASLTNALNKLTSSKVVKSISTLAEGYLKKENHDV--EEIQYVGNRAFS---QGVPNFYHPSLRNHENFSYSNTKNVLQPL--PGFASSSVPEKKSNLEE

Query:  MVVMFIKEQKVLNVNFQTIVNNHDTTLT--------NTEVQIGQIASAVNALHKGKFPSDTETNPREQCKMVTLRSGRQLEVSLEKKLKKE
         ++ FI+E         + ++N +T  +        N EVQIGQ+A+ +NA  +G FPS+TE NPREQCK + LRSGR+LE  LE +  K+
Subjt:  MVVMFIKEQKVLNVNFQTIVNNHDTTLT--------NTEVQIGQIASAVNALHKGKFPSDTETNPREQCKMVTLRSGRQLEVSLEKKLKKE

A0A2P5BPI6 Uncharacterized protein1.5e-2447.92Show/hide
Query:  VPNFYHPSLRNHENFSYSNTKNVLQPLPGFASSSVPEKKSNLEEMVVMFI--------KEQKVLNVNFQTIVNNHDTTLTNTEVQIGQIASAVNALHKGK
        +P  Y+P LRNHENFSY NT+NVLQP PGF +  V EKKS+LE+++  FI        K++  L+ N +T  NN + T+ + EVQIGQ+A+++     GK
Subjt:  VPNFYHPSLRNHENFSYSNTKNVLQPLPGFASSSVPEKKSNLEEMVVMFI--------KEQKVLNVNFQTIVNNHDTTLTNTEVQIGQIASAVNALHKGK

Query:  FPSDTETNPREQCKMVTLRSGRQLEVSLEKKL---KKEENSIDE
        FPSDTETNP++ CK +TLR+G+++EVS  K+      +EN ++E
Subjt:  FPSDTETNPREQCKMVTLRSGRQLEVSLEKKL---KKEENSIDE

A0A6P9DWY0 uncharacterized protein LOC1183440267.8e-2943.33Show/hide
Query:  MASLTNALNKLTSSKVVKSISTLAEGYLKKENHDV--EEIQYVGNRAFS---QGVPNFYHPSLRNHENFSYSNTKNVLQPLPGFASSSVPEKKSNLEEMV
        +ASL++ ++ LT+ ++ +S   +A   +   +++   E++QY+ NR ++     +PN+YH  LRNHEN SY NTKNVLQP PGF  S   EKK +LE+ +
Subjt:  MASLTNALNKLTSSKVVKSISTLAEGYLKKENHDV--EEIQYVGNRAFS---QGVPNFYHPSLRNHENFSYSNTKNVLQPLPGFASSSVPEKKSNLEEMV

Query:  VMFIKEQKVLNV-------NFQTIVNNHDTTLTNTEVQIGQIASAVNALHKGKFPSDTETNPREQCKMVTLRSGRQLEVS
        V F++E             N +T  +N    + N EVQIGQ+A+ +NA  +G FPS+TE NPREQCK +TLRSGR+L+ S
Subjt:  VMFIKEQKVLNV-------NFQTIVNNHDTTLTNTEVQIGQIASAVNALHKGKFPSDTETNPREQCKMVTLRSGRQLEVS

A0A6P9F5T6 uncharacterized protein LOC1089899769.9e-2442.11Show/hide
Query:  SKVVKSISTLAEGYLKKENHDVEEIQYVGNRAFS---QGVPNFYHPSLRNHENFSYSNTKNVLQPL--PGFASSSVPEKKSNLEEMVVMFIKEQKVLNV-
        SK V+         +       E++QY+ N  ++     +PN+Y+P L+NHEN SY NTKNVLQP   PGF S S  EKK +LE+ +V F++E  V    
Subjt:  SKVVKSISTLAEGYLKKENHDVEEIQYVGNRAFS---QGVPNFYHPSLRNHENFSYSNTKNVLQPL--PGFASSSVPEKKSNLEEMVVMFIKEQKVLNV-

Query:  ------NFQTIVNNHDTTLTNTEVQIGQIASAVNALHKGKFPSDTETNPREQCKMVTLRSGRQLEVSLEKK
              N +T  +N   T+ N EVQIGQ+A  +N+  +G FPS+ E NP EQ K +TLRSGR++E S  K+
Subjt:  ------NFQTIVNNHDTTLTNTEVQIGQIASAVNALHKGKFPSDTETNPREQCKMVTLRSGRQLEVSLEKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATCCTTGACAAATGCACTGAATAAGCTTACTTCATCTAAGGTGGTCAAGTCCATCTCCACCTTAGCTGAAGGATATTTAAAGAAGGAGAATCATGATGTCGAAGA
AATTCAGTATGTGGGAAACAGAGCATTCAGTCAAGGAGTACCAAACTTTTACCATCCAAGTCTACGCAATCATGAGAACTTTTCGTACTCCAACACTAAGAATGTATTGC
AGCCACTGCCAGGATTTGCTTCATCAAGTGTCCCAGAAAAGAAGAGCAACCTGGAGGAGATGGTGGTCATGTTTATCAAGGAGCAGAAGGTTTTAAATGTGAATTTCCAG
ACAATAGTTAATAACCATGACACAACTCTTACGAATACGGAAGTTCAGATAGGTCAGATCGCTTCAGCAGTAAATGCCCTTCATAAAGGGAAGTTTCCAAGCGACACTGA
AACCAATCCTAGAGAGCAGTGCAAGATGGTGACACTGAGAAGTGGTAGACAACTGGAGGTCAGTTTAGAGAAGAAGTTGAAGAAAGAAGAGAATAGCATTGATGAAGATG
GAAGGGATGAGACACAGAAAGCCTCCTCTGAAAGGTCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCATCCTTGACAAATGCACTGAATAAGCTTACTTCATCTAAGGTGGTCAAGTCCATCTCCACCTTAGCTGAAGGATATTTAAAGAAGGAGAATCATGATGTCGAAGA
AATTCAGTATGTGGGAAACAGAGCATTCAGTCAAGGAGTACCAAACTTTTACCATCCAAGTCTACGCAATCATGAGAACTTTTCGTACTCCAACACTAAGAATGTATTGC
AGCCACTGCCAGGATTTGCTTCATCAAGTGTCCCAGAAAAGAAGAGCAACCTGGAGGAGATGGTGGTCATGTTTATCAAGGAGCAGAAGGTTTTAAATGTGAATTTCCAG
ACAATAGTTAATAACCATGACACAACTCTTACGAATACGGAAGTTCAGATAGGTCAGATCGCTTCAGCAGTAAATGCCCTTCATAAAGGGAAGTTTCCAAGCGACACTGA
AACCAATCCTAGAGAGCAGTGCAAGATGGTGACACTGAGAAGTGGTAGACAACTGGAGGTCAGTTTAGAGAAGAAGTTGAAGAAAGAAGAGAATAGCATTGATGAAGATG
GAAGGGATGAGACACAGAAAGCCTCCTCTGAAAGGTCCTAA
Protein sequenceShow/hide protein sequence
MASLTNALNKLTSSKVVKSISTLAEGYLKKENHDVEEIQYVGNRAFSQGVPNFYHPSLRNHENFSYSNTKNVLQPLPGFASSSVPEKKSNLEEMVVMFIKEQKVLNVNFQ
TIVNNHDTTLTNTEVQIGQIASAVNALHKGKFPSDTETNPREQCKMVTLRSGRQLEVSLEKKLKKEENSIDEDGRDETQKASSERS