| GenBank top hits | e value | %identity | Alignment |
|---|
| BBG99665.1 transposable element gene [Prunus dulcis] | 2.3e-68 | 50.17 | Show/hide |
Query: RILHCGFFWPTLFKDAHWFYKQCDACQRRGNLGPRDEMPLTYILEVELFDVW--------------------VDYVSKWVEVIACHQSDAKTVARFLQSH
++L GFFWPTLFKDA+ F CD CQR GNL R++MPLT IL +++FDVW VDYVSKWVE IA +DAK V FL+ +
Subjt: RILHCGFFWPTLFKDAHWFYKQCDACQRRGNLGPRDEMPLTYILEVELFDVW--------------------VDYVSKWVEVIACHQSDAKTVARFLQSH
Query: IFARFGTPTALVSDEA-------------KYGIKHRIATSYHPQANGQAEISNREIKAILEKVVHPSRKDWSFRLDEALWAYRSAYKTPL--GAIRMLQL
IF RFGTP A++SD KYGI H++AT YHPQ +GQ EISNREIK ILEK V+ +RKDWS RLD+ALWAYR+AYKTP+ G R LQL
Subjt: IFARFGTPTALVSDEA-------------KYGIKHRIATSYHPQANGQAEISNREIKAILEKVVHPSRKDWSFRLDEALWAYRSAYKTPL--GAIRMLQL
Query: NELEEFRQFSYENAKMYKEKTKLWHDKKIKSKEFVKGQK-------------------------------------DEKDGSVFKVNGQRVKHYWGEEF
NELEE R +YENAK+YKEKTK +HDKKI K F KGQK + KDGS FKVNG R+K Y+ F
Subjt: NELEEFRQFSYENAKMYKEKTKLWHDKKIKSKEFVKGQK-------------------------------------DEKDGSVFKVNGQRVKHYWGEEF
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| KAA3473721.1 retroelement pol polyprotein-like [Gossypium australe] | 1.3e-66 | 46.32 | Show/hide |
Query: RILHCGFFWPTLFKDAHWFYKQCDACQRRGNLGPRDEMPLTYILEVELFDVW--------------------VDYVSKWVEVIACHQSDAKTVARFLQSH
++L GFFWPTLFKDA+ + K CD CQR GN+ R+EMP T I+E ELFDVW V YVSKWVE A DAK V +FLQ H
Subjt: RILHCGFFWPTLFKDAHWFYKQCDACQRRGNLGPRDEMPLTYILEVELFDVW--------------------VDYVSKWVEVIACHQSDAKTVARFLQSH
Query: IFARFGTPTALVSDEA-------------KYGIKHRIATSYHPQANGQAEISNREIKAILEKVVHPSRKDWSFRLDEALWAYRSAYKTPLGAI-------
+F RFGTP A++SDE K+G+KH++AT+YHPQ NGQAE++N+EIK ILEKVV +++DWS RLD+ALWAY+ YKTPLG
Subjt: IFARFGTPTALVSDEA-------------KYGIKHRIATSYHPQANGQAEISNREIKAILEKVVHPSRKDWSFRLDEALWAYRSAYKTPLGAI-------
Query: ------------------------------RMLQLNELEEFRQFSYENAKMYKEKTKLWHDKKIKSKEFVKGQKDEKDGSVFKVNGQRVKHYWGEEFRLK
RMLQLNELEEFR FSYENAK+ KE+ K WHDK I+ +EF G+ G F+VN QR+KHY+GE
Subjt: ------------------------------RMLQLNELEEFRQFSYENAKMYKEKTKLWHDKKIKSKEFVKGQKDEKDGSVFKVNGQRVKHYWGEEFRLK
Query: YPSLRLDLILHGLVDFILQYFIIGSL
D IL L D + F I L
Subjt: YPSLRLDLILHGLVDFILQYFIIGSL
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| XP_012841295.1 PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC105961608 [Erythranthe guttata] | 1.4e-68 | 33.99 | Show/hide |
Query: RILHCGFFWPTLFKDAHWFYKQCDACQRRGNLGPRDEMPLTYILEVELFDVW--------------------VDYVSKWVEVIACHQSDAKTVARFLQSH
++L GFFWPTLFKD + F CD CQR GN+ R E+PL ++EVE FDVW VDYVSKWVE A +D+ V FL+
Subjt: RILHCGFFWPTLFKDAHWFYKQCDACQRRGNLGPRDEMPLTYILEVELFDVW--------------------VDYVSKWVEVIACHQSDAKTVARFLQSH
Query: IFARFGTPTALVSDE-------------AKYGIKHRIATSYHPQANGQAEISNREIKAILEKVVHPSRKDWSFRLDEALWAYRSAYKTPLGAI-------
IF RFGTP A+++D AKYG+KH++A +YHPQ NGQAE++NREIK ILEKVV P+ KDWS +LD+ALWAYR+AYKTPLG
Subjt: IFARFGTPTALVSDE-------------AKYGIKHRIATSYHPQANGQAEISNREIKAILEKVVHPSRKDWSFRLDEALWAYRSAYKTPLGAI-------
Query: ------------------------------RMLQLNELEEFRQFSYENAKMYKEKTKLWHDKKIKSKEFVKGQKDEKDGSVFKVNGQRVKHYWGEEFRLK
RMLQLNEL+E R +YE+ ++YKEKTK WHD KI +EF KGQ S K+ ++K W F +
Subjt: ------------------------------RMLQLNELEEFRQFSYENAKMYKEKTKLWHDKKIKSKEFVKGQKDEKDGSVFKVNGQRVKHYWGEEFRLK
Query: YPSLRLDLILHGLVDFILQYFIIGSLDLALNFRSNIRVAFCWSLIYLQPLNLETKPIISTTVQEGDVVKNQETEAEEQVAGRRGVRVVW--NTPLPSTSN
LD+ HG V+ + + +F+ N + L + Q + T +QE +V E RR VR+ + N T N
Subjt: YPSLRLDLILHGLVDFILQYFIIGSLDLALNFRSNIRVAFCWSLIYLQPLNLETKPIISTTVQEGDVVKNQETEAEEQVAGRRGVRVVW--NTPLPSTSN
Query: FEEEKREAENKAKEEEARKAEEERLHEQRENRGKGIAEASGEIEEPREPFIRFVNELARAKYQKVLKRDFLFERGFGSDMPRF--LESRIASLGWRQFCA
+ ++ K + ++ E ++GKG + + +I P + F + A A+++K + + ER + +P+F L GW+
Subjt: FEEEKREAENKAKEEEARKAEEERLHEQRENRGKGIAEASGEIEEPREPFIRFVNELARAKYQKVLKRDFLFERGFGSDMPRF--LESRIASLGWRQFCA
Query: KPDPVNANIVREFYAN--LDVKDDFEV-IVRGVPVQWSPEAINNLFDLQDFPHAVFNEMMVA
+N ++VREFYAN + + ++ V VRG ++W+ AIN+ + L+ + +M +A
Subjt: KPDPVNANIVREFYAN--LDVKDDFEV-IVRGVPVQWSPEAINNLFDLQDFPHAVFNEMMVA
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| XP_023874613.1 uncharacterized protein LOC111987139 [Quercus suber] | 1.7e-66 | 43.37 | Show/hide |
Query: RILHCGFFWPTLFKDAHWFYKQCDACQRRGNLGPRDEMPLTYILEVELFDVW--------------------VDYVSKWVEVIACHQSDAKTVARFLQSH
++L GFFWP++F+D++ K CD CQR GN+ R E+PL ILEVELFDVW VDYVSKWVE IA +DAK V +FL +
Subjt: RILHCGFFWPTLFKDAHWFYKQCDACQRRGNLGPRDEMPLTYILEVELFDVW--------------------VDYVSKWVEVIACHQSDAKTVARFLQSH
Query: IFARFGTPTALVSDE-------------AKYGIKHRIATSYHPQANGQAEISNREIKAILEKVVHPSRKDWSFRLDEALWAYRSAYKTPLGAI-------
IF RFGTP A++SDE +KYG+KH+IA +YHPQ NGQAEISNREIK ILEK V+ +RKDW+ +LD+ALWAYR+A+KTP+G
Subjt: IFARFGTPTALVSDE-------------AKYGIKHRIATSYHPQANGQAEISNREIKAILEKVVHPSRKDWSFRLDEALWAYRSAYKTPLGAI-------
Query: ------------------------------RMLQLNELEEFRQFSYENAKMYKEKTKLWHDKKIKSKEFVKGQK--------------------------
R+LQLNE++EFR +YENAK+YKE+TK WHDK+I +EF GQ+
Subjt: ------------------------------RMLQLNELEEFRQFSYENAKMYKEKTKLWHDKKIKSKEFVKGQK--------------------------
Query: ----------DEKDGSVFKVNGQRVKHYWGEE
+K G +F+VNGQR+KHY+GE+
Subjt: ----------DEKDGSVFKVNGQRVKHYWGEE
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| XP_042757945.1 uncharacterized protein LOC111885853 [Lactuca sativa] | 1.1e-68 | 45.51 | Show/hide |
Query: MRILHCGFFWPTLFKDAHWFYKQCDACQRRGNLGPRDEMPLTYILEVELFDVW--------------------VDYVSKWVEVIACHQSDAKTVARFLQS
+R+LH GF+WP+LFKDA+ F K+CD CQR GN+G R EMPL+ I+EVELFDVW VDYVSKWVE +AC ++DA+TV FL+
Subjt: MRILHCGFFWPTLFKDAHWFYKQCDACQRRGNLGPRDEMPLTYILEVELFDVW--------------------VDYVSKWVEVIACHQSDAKTVARFLQS
Query: HIFARFGTPTALVSDE-------------AKYGIKHRIATSYHPQANGQAEISNREIKAILEKVVHPSRKDWSFRLDEALWAYRSAYKTPLGAI------
IF+RFGTP A++SDE AKY IKHR+AT+YHPQ NG AE +N+++K ILEKVV+ SRKDW+ +LD+ LWAYR+AY+T LG
Subjt: HIFARFGTPTALVSDE-------------AKYGIKHRIATSYHPQANGQAEISNREIKAILEKVVHPSRKDWSFRLDEALWAYRSAYKTPLGAI------
Query: -------------------------------RMLQLNELEEFRQFSYENAKMYKEKTKLWHDKKIKSKEFVKGQK-------------------------
RM QL ELEEFR +YENAK+ KEK K WHDKKI +EF +GQ
Subjt: -------------------------------RMLQLNELEEFRQFSYENAKMYKEKTKLWHDKKIKSKEFVKGQK-------------------------
Query: ------------DEKDGSVFKVNGQRVKHYWGEE
+EKDG F VNGQRVKHY+GEE
Subjt: ------------DEKDGSVFKVNGQRVKHYWGEE
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A2G9FWY3 Reverse transcriptase | 6.9e-66 | 43.23 | Show/hide |
Query: RILHCGFFWPTLFKDAHWFYKQCDACQRRGNLGPRDEMPLTYILEVELFDVW--------------------VDYVSKWVEVIACHQSDAKTVARFLQSH
+IL GFFWP LFKDAH F CD CQR GN+ R EMPL ILEVELFDVW VDYVSKWVE A +D+K V F++ +
Subjt: RILHCGFFWPTLFKDAHWFYKQCDACQRRGNLGPRDEMPLTYILEVELFDVW--------------------VDYVSKWVEVIACHQSDAKTVARFLQSH
Query: IFARFGTPTALVSDE-------------AKYGIKHRIATSYHPQANGQAEISNREIKAILEKVVHPSRKDWSFRLDEALWAYRSAYKTPLG---------
IF RFGTP A++SD +KYG+KH+I+T YHPQ +GQ E+SNREIK ILEK V +RKDWS RLDEALWAYR+AYKTP+G
Subjt: IFARFGTPTALVSDE-------------AKYGIKHRIATSYHPQANGQAEISNREIKAILEKVVHPSRKDWSFRLDEALWAYRSAYKTPLG---------
Query: ---------------AI-------------RMLQLNELEEFRQFSYENAKMYKEKTKLWHDKKIKSKEFVKGQ---------------------------
AI R+LQLNEL+EFR +YENAK+YKEK K WH+KKI + F GQ
Subjt: ---------------AI-------------RMLQLNELEEFRQFSYENAKMYKEKTKLWHDKKIKSKEFVKGQ---------------------------
Query: ----------KDEKDGSVFKVNGQRVKHYWGEEFRLKYPSLRLDLIL
+++ + FKVN QR+KHYWGE ++ S+ L+ ++
Subjt: ----------KDEKDGSVFKVNGQRVKHYWGEEFRLKYPSLRLDLIL
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| A0A2G9HBV9 DNA-directed DNA polymerase | 3.4e-65 | 43.31 | Show/hide |
Query: RILHCGFFWPTLFKDAHWFYKQCDACQRRGNLGPRDEMPLTYILEVELFDVW--------------------VDYVSKWVEVIACHQSDAKTVARFLQSH
+IL GFFWP LFKDA+ F CD CQR GN+ R EMPL ILEVELFDVW VDYVSKWVE +A +D+K V F++ +
Subjt: RILHCGFFWPTLFKDAHWFYKQCDACQRRGNLGPRDEMPLTYILEVELFDVW--------------------VDYVSKWVEVIACHQSDAKTVARFLQSH
Query: IFARFGTPTALVSDE-------------AKYGIKHRIATSYHPQANGQAEISNREIKAILEKVVHPSRKDWSFRLDEALWAYRSAYKTPLG---------
IF RFGTP A++S+ +KYG+KH+I+T YHPQ +GQ E+SNREIK ILEK V +RKDWS RLDEALWAYR+A+KTP+G
Subjt: IFARFGTPTALVSDE-------------AKYGIKHRIATSYHPQANGQAEISNREIKAILEKVVHPSRKDWSFRLDEALWAYRSAYKTPLG---------
Query: ---------------AI-------------RMLQLNELEEFRQFSYENAKMYKEKTKLWHDKKIKSKEFVKGQ---------------------------
AI R+LQLNEL+EFR +YENAK+YKEKTK WHDKKI + F GQ
Subjt: ---------------AI-------------RMLQLNELEEFRQFSYENAKMYKEKTKLWHDKKIKSKEFVKGQ---------------------------
Query: ----------KDEKDGSVFKVNGQRVKHYWGEEFRLKYPSLRLD
++E + FKVN QR+KHYWG + S+ L+
Subjt: ----------KDEKDGSVFKVNGQRVKHYWGEEFRLKYPSLRLD
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| A0A2K3NJZ5 Integrase catalytic domain-containing protein (Fragment) | 2.0e-65 | 42.57 | Show/hide |
Query: RILHCGFFWPTLFKDAHWFYKQCDACQRRGNLGPRDEMPLTYILEVELFDVW--------------------VDYVSKWVEVIACHQSDAKTVARFLQSH
++L G FWPTLFKDA + K+CD CQR GN+ R+EMP +LEVE+FDVW VDYVSKWVE IA +DA+ V FL+ +
Subjt: RILHCGFFWPTLFKDAHWFYKQCDACQRRGNLGPRDEMPLTYILEVELFDVW--------------------VDYVSKWVEVIACHQSDAKTVARFLQSH
Query: IFARFGTPTALVSDEA-------------KYGIKHRIATSYHPQANGQAEISNREIKAILEKVVHPSRKDWSFRLDEALWAYRSAYKTPL----------
IF+RFG P AL+SDE KY + HRIAT YHPQ +GQ E+SNR+IK ILEK V+ SRKDWS +LD+ALWAYR+A+KTP+
Subjt: IFARFGTPTALVSDEA-------------KYGIKHRIATSYHPQANGQAEISNREIKAILEKVVHPSRKDWSFRLDEALWAYRSAYKTPL----------
Query: ---------------------------GAIRMLQLNELEEFRQFSYENAKMYKEKTKLWHDKKIKSKEFVKGQ---------------------------
G R+LQL+EL+EFR F+YENAK++KEKTK WHDKKI+++EF +GQ
Subjt: ---------------------------GAIRMLQLNELEEFRQFSYENAKMYKEKTKLWHDKKIKSKEFVKGQ---------------------------
Query: ----------KDEKDGSVFKVNGQRVKHYWGEEFRLKYPSLRL
+D FKVNGQR+K Y+G+E L S+ L
Subjt: ----------KDEKDGSVFKVNGQRVKHYWGEEFRLKYPSLRL
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| A0A4Y1R6P1 Reverse transcriptase | 1.1e-68 | 50.17 | Show/hide |
Query: RILHCGFFWPTLFKDAHWFYKQCDACQRRGNLGPRDEMPLTYILEVELFDVW--------------------VDYVSKWVEVIACHQSDAKTVARFLQSH
++L GFFWPTLFKDA+ F CD CQR GNL R++MPLT IL +++FDVW VDYVSKWVE IA +DAK V FL+ +
Subjt: RILHCGFFWPTLFKDAHWFYKQCDACQRRGNLGPRDEMPLTYILEVELFDVW--------------------VDYVSKWVEVIACHQSDAKTVARFLQSH
Query: IFARFGTPTALVSDEA-------------KYGIKHRIATSYHPQANGQAEISNREIKAILEKVVHPSRKDWSFRLDEALWAYRSAYKTPL--GAIRMLQL
IF RFGTP A++SD KYGI H++AT YHPQ +GQ EISNREIK ILEK V+ +RKDWS RLD+ALWAYR+AYKTP+ G R LQL
Subjt: IFARFGTPTALVSDEA-------------KYGIKHRIATSYHPQANGQAEISNREIKAILEKVVHPSRKDWSFRLDEALWAYRSAYKTPL--GAIRMLQL
Query: NELEEFRQFSYENAKMYKEKTKLWHDKKIKSKEFVKGQK-------------------------------------DEKDGSVFKVNGQRVKHYWGEEF
NELEE R +YENAK+YKEKTK +HDKKI K F KGQK + KDGS FKVNG R+K Y+ F
Subjt: NELEEFRQFSYENAKMYKEKTKLWHDKKIKSKEFVKGQK-------------------------------------DEKDGSVFKVNGQRVKHYWGEEF
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| A0A5B6VWJ0 Retroelement pol polyprotein-like | 6.2e-67 | 46.32 | Show/hide |
Query: RILHCGFFWPTLFKDAHWFYKQCDACQRRGNLGPRDEMPLTYILEVELFDVW--------------------VDYVSKWVEVIACHQSDAKTVARFLQSH
++L GFFWPTLFKDA+ + K CD CQR GN+ R+EMP T I+E ELFDVW V YVSKWVE A DAK V +FLQ H
Subjt: RILHCGFFWPTLFKDAHWFYKQCDACQRRGNLGPRDEMPLTYILEVELFDVW--------------------VDYVSKWVEVIACHQSDAKTVARFLQSH
Query: IFARFGTPTALVSDEA-------------KYGIKHRIATSYHPQANGQAEISNREIKAILEKVVHPSRKDWSFRLDEALWAYRSAYKTPLGAI-------
+F RFGTP A++SDE K+G+KH++AT+YHPQ NGQAE++N+EIK ILEKVV +++DWS RLD+ALWAY+ YKTPLG
Subjt: IFARFGTPTALVSDEA-------------KYGIKHRIATSYHPQANGQAEISNREIKAILEKVVHPSRKDWSFRLDEALWAYRSAYKTPLGAI-------
Query: ------------------------------RMLQLNELEEFRQFSYENAKMYKEKTKLWHDKKIKSKEFVKGQKDEKDGSVFKVNGQRVKHYWGEEFRLK
RMLQLNELEEFR FSYENAK+ KE+ K WHDK I+ +EF G+ G F+VN QR+KHY+GE
Subjt: ------------------------------RMLQLNELEEFRQFSYENAKMYKEKTKLWHDKKIKSKEFVKGQKDEKDGSVFKVNGQRVKHYWGEEFRLK
Query: YPSLRLDLILHGLVDFILQYFIIGSL
D IL L D + F I L
Subjt: YPSLRLDLILHGLVDFILQYFIIGSL
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| A1Z651 Gag-Pol polyprotein | 4.8e-08 | 35.65 | Show/hide |
Query: VWVDYVSKWVEVIACHQSDAKTVARFLQSHIFARFGTPTALVSDEAK-------------YGIKHRIATSYHPQANGQAEISNREIKAILEKVVHPS-RK
V+VD S WVE + AK V++ L IF RFG P L SD GI ++ +Y PQ++GQ E NR IK L K+ S +
Subjt: VWVDYVSKWVEVIACHQSDAKTVARFLQSHIFARFGTPTALVSDEAK-------------YGIKHRIATSYHPQANGQAEISNREIKAILEKVVHPS-RK
Query: DWSFRLDEALWAYRS
DW L AL+ R+
Subjt: DWSFRLDEALWAYRS
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| P10273 Gag-Pol polyprotein | 1.1e-07 | 33.04 | Show/hide |
Query: VWVDYVSKWVEVIACHQSDAKTVARFLQSHIFARFGTPTALVSDEAK-------------YGIKHRIATSYHPQANGQAEISNREIKAILEKV-VHPSRK
V++D S W E AK VA+ L IF R+G P L SD GI ++ +Y PQ++GQ E NR IK L K+ + K
Subjt: VWVDYVSKWVEVIACHQSDAKTVARFLQSHIFARFGTPTALVSDEAK-------------YGIKHRIATSYHPQANGQAEISNREIKAILEKV-VHPSRK
Query: DWSFRLDEALWAYRS
DW L L+ R+
Subjt: DWSFRLDEALWAYRS
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| P92516 Uncharacterized mitochondrial protein AtMg00750 | 3.1e-15 | 61.4 | Show/hide |
Query: ILHCGFFWPTLFKDAHWFYKQCDACQRRGNLGPRDEMPLTYILEVELFDVWVDYVSK
+L GF+WPT FKDAH F CDACQR+GN R+EMP +ILEVE+FDVW Y K
Subjt: ILHCGFFWPTLFKDAHWFYKQCDACQRRGNLGPRDEMPLTYILEVELFDVWVDYVSK
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| Q2F7J0 Gag-Pol polyprotein | 4.8e-08 | 35.65 | Show/hide |
Query: VWVDYVSKWVEVIACHQSDAKTVARFLQSHIFARFGTPTALVSDEAK-------------YGIKHRIATSYHPQANGQAEISNREIKAILEKVVHPS-RK
V+VD S WVE + AK V++ L IF RFG P L SD GI ++ +Y PQ++GQ E NR IK L K+ S +
Subjt: VWVDYVSKWVEVIACHQSDAKTVARFLQSHIFARFGTPTALVSDEAK-------------YGIKHRIATSYHPQANGQAEISNREIKAILEKVVHPS-RK
Query: DWSFRLDEALWAYRS
DW L AL+ R+
Subjt: DWSFRLDEALWAYRS
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| Q2F7J3 Gag-Pol polyprotein | 6.3e-08 | 35.65 | Show/hide |
Query: VWVDYVSKWVEVIACHQSDAKTVARFLQSHIFARFGTPTALVSDEAK-------------YGIKHRIATSYHPQANGQAEISNREIKAILEKVVHPS-RK
V+VD S WVE + AK V + L IF RFG P L SD GI ++ +Y PQ++GQ E NR IK L K+ S +
Subjt: VWVDYVSKWVEVIACHQSDAKTVARFLQSHIFARFGTPTALVSDEAK-------------YGIKHRIATSYHPQANGQAEISNREIKAILEKVVHPS-RK
Query: DWSFRLDEALWAYRS
DW L AL+ R+
Subjt: DWSFRLDEALWAYRS
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