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Lag0008504 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0008504
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionGag/pol protein
Genome locationchr9:23859156..23860104
RNA-Seq ExpressionLag0008504
SyntenyLag0008504
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025945.1 gag/pol protein [Cucumis melo var. makuwa]8.1e-2069.23Show/hide
Query:  MRDHKPRSKIILGEATEESSRVVDEIGPSTRVDEGTSSSDPSRPSQTLGMPRRSRRVVLQPDRYLGLTETQSLFPTEG
        MR+HKPRSK++L EAT+ES+RVVDE+GPS+RVDE T++S  S PSQ+L MPRRS RVV QP+RYLGLTETQ + P +G
Subjt:  MRDHKPRSKIILGEATEESSRVVDEIGPSTRVDEGTSSSDPSRPSQTLGMPRRSRRVVLQPDRYLGLTETQSLFPTEG

KAA0048178.1 gag/pol protein [Cucumis melo var. makuwa]8.1e-2067.95Show/hide
Query:  MRDHKPRSKIILGEATEESSRVVDEIGPSTRVDEGTSSSDPSRPSQTLGMPRRSRRVVLQPDRYLGLTETQSLFPTEG
        MRDHKPRSK++L EAT+ES+RVVDE+GPS+RVDE T++S  S PSQ+L MPRRS R+V QP+RYLGLT+TQ + P +G
Subjt:  MRDHKPRSKIILGEATEESSRVVDEIGPSTRVDEGTSSSDPSRPSQTLGMPRRSRRVVLQPDRYLGLTETQSLFPTEG

KAA0058362.1 gag/pol protein [Cucumis melo var. makuwa]8.1e-2067.95Show/hide
Query:  MRDHKPRSKIILGEATEESSRVVDEIGPSTRVDEGTSSSDPSRPSQTLGMPRRSRRVVLQPDRYLGLTETQSLFPTEG
        MRDHKPRSK++L E+T+ES+RVVDE+GPS+RVDE T++S  S  SQ+L MPRRSRRV+ QP+RYLGLTETQ + P +G
Subjt:  MRDHKPRSKIILGEATEESSRVVDEIGPSTRVDEGTSSSDPSRPSQTLGMPRRSRRVVLQPDRYLGLTETQSLFPTEG

TYK15984.1 gag/pol protein [Cucumis melo var. makuwa]8.1e-2069.23Show/hide
Query:  MRDHKPRSKIILGEATEESSRVVDEIGPSTRVDEGTSSSDPSRPSQTLGMPRRSRRVVLQPDRYLGLTETQSLFPTEG
        MR+HKPRSK++L EAT+ES+RVVDE+GPS+RVDE T++S  S PSQ+L MPRRS RVV QP+RYLGLTETQ + P +G
Subjt:  MRDHKPRSKIILGEATEESSRVVDEIGPSTRVDEGTSSSDPSRPSQTLGMPRRSRRVVLQPDRYLGLTETQSLFPTEG

TYK28885.1 gag/pol protein [Cucumis melo var. makuwa]8.1e-2070.13Show/hide
Query:  RDHKPRSKIILGEATEESSRVVDEIGPSTRVDEGTSSSDPSRPSQTLGMPRRSRRVVLQPDRYLGLTETQSLFPTEG
        RDHKPRSK++L EAT+ES+RVVDE+GPS+RVDE T++S  S PSQ+L MPRRS RVV QP+RYLGLTETQ + P +G
Subjt:  RDHKPRSKIILGEATEESSRVVDEIGPSTRVDEGTSSSDPSRPSQTLGMPRRSRRVVLQPDRYLGLTETQSLFPTEG

TrEMBL top hitse value%identityAlignment
A0A5A7TYX5 Gag/pol protein3.9e-2067.95Show/hide
Query:  MRDHKPRSKIILGEATEESSRVVDEIGPSTRVDEGTSSSDPSRPSQTLGMPRRSRRVVLQPDRYLGLTETQSLFPTEG
        MRDHKPRSK++L EAT+ES+RVVDE+GPS+RVDE T++S  S PSQ+L MPRRS R+V QP+RYLGLT+TQ + P +G
Subjt:  MRDHKPRSKIILGEATEESSRVVDEIGPSTRVDEGTSSSDPSRPSQTLGMPRRSRRVVLQPDRYLGLTETQSLFPTEG

A0A5A7TZD0 Gag/pol protein3.9e-2069.23Show/hide
Query:  MRDHKPRSKIILGEATEESSRVVDEIGPSTRVDEGTSSSDPSRPSQTLGMPRRSRRVVLQPDRYLGLTETQSLFPTEG
        MR+HKPRSK++L EAT+ES+RVVDE+GPS+RVDE T++S  S PSQ+L MPRRS RVV QP+RYLGLTETQ + P +G
Subjt:  MRDHKPRSKIILGEATEESSRVVDEIGPSTRVDEGTSSSDPSRPSQTLGMPRRSRRVVLQPDRYLGLTETQSLFPTEG

A0A5A7UR66 Gag/pol protein3.9e-2067.95Show/hide
Query:  MRDHKPRSKIILGEATEESSRVVDEIGPSTRVDEGTSSSDPSRPSQTLGMPRRSRRVVLQPDRYLGLTETQSLFPTEG
        MRDHKPRSK++L E+T+ES+RVVDE+GPS+RVDE T++S  S  SQ+L MPRRSRRV+ QP+RYLGLTETQ + P +G
Subjt:  MRDHKPRSKIILGEATEESSRVVDEIGPSTRVDEGTSSSDPSRPSQTLGMPRRSRRVVLQPDRYLGLTETQSLFPTEG

A0A5D3BUN8 Gag/pol protein3.9e-2069.23Show/hide
Query:  MRDHKPRSKIILGEATEESSRVVDEIGPSTRVDEGTSSSDPSRPSQTLGMPRRSRRVVLQPDRYLGLTETQSLFPTEG
        MR+HKPRSK++L EAT+ES+RVVDE+GPS+RVDE T++S  S PSQ+L MPRRS RVV QP+RYLGLTETQ + P +G
Subjt:  MRDHKPRSKIILGEATEESSRVVDEIGPSTRVDEGTSSSDPSRPSQTLGMPRRSRRVVLQPDRYLGLTETQSLFPTEG

A0A5D3DZX8 Gag/pol protein3.9e-2070.13Show/hide
Query:  RDHKPRSKIILGEATEESSRVVDEIGPSTRVDEGTSSSDPSRPSQTLGMPRRSRRVVLQPDRYLGLTETQSLFPTEG
        RDHKPRSK++L EAT+ES+RVVDE+GPS+RVDE T++S  S PSQ+L MPRRS RVV QP+RYLGLTETQ + P +G
Subjt:  RDHKPRSKIILGEATEESSRVVDEIGPSTRVDEGTSSSDPSRPSQTLGMPRRSRRVVLQPDRYLGLTETQSLFPTEG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGATCATAAACCACGCAGCAAAATAATATTAGGAGAAGCTACTGAAGAATCATCAAGAGTTGTTGATGAAATTGGACCTTCAACAAGGGTTGATGAAGGAACTAG
TTCTTCAGATCCATCCCGTCCATCTCAAACGTTGGGAATGCCTCGACGCAGTAGGAGGGTTGTATTACAACCTGACCGCTACTTGGGTTTAACTGAAACTCAGAGTCTTT
TTCCGACCGAAGGCTGCTATGCTAGTTGTAGCGCTCCCACGCTTGACTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGAGATCATAAACCACGCAGCAAAATAATATTAGGAGAAGCTACTGAAGAATCATCAAGAGTTGTTGATGAAATTGGACCTTCAACAAGGGTTGATGAAGGAACTAG
TTCTTCAGATCCATCCCGTCCATCTCAAACGTTGGGAATGCCTCGACGCAGTAGGAGGGTTGTATTACAACCTGACCGCTACTTGGGTTTAACTGAAACTCAGAGTCTTT
TTCCGACCGAAGGCTGCTATGCTAGTTGTAGCGCTCCCACGCTTGACTAA
Protein sequenceShow/hide protein sequence
MRDHKPRSKIILGEATEESSRVVDEIGPSTRVDEGTSSSDPSRPSQTLGMPRRSRRVVLQPDRYLGLTETQSLFPTEGCYASCSAPTLD