; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0008525 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0008525
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionZinc finger, CCHC-type
Genome locationchr9:24507834..24517038
RNA-Seq ExpressionLag0008525
SyntenyLag0008525
Gene Ontology termsNA
InterPro domainsIPR037848 - GEM-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON65458.1 Zinc finger, CCHC-type, partial [Trema orientale]7.8e-1147.67Show/hide
Query:  RFEENFKNPHASGNTNNQGGNNASSSTYIATPEILNDSKWLADSGATNHVTADASNLAVKNDYNGKDSLVVGDGTKLGISHIGSNV
        RF+ +++ P  SG++  Q    + +  YIATP  ++D  W  DSGATNHVTAD   LA K DY GK+ L VG+G++L I HIGS++
Subjt:  RFEENFKNPHASGNTNNQGGNNASSSTYIATPEILNDSKWLADSGATNHVTADASNLAVKNDYNGKDSLVVGDGTKLGISHIGSNV

PON69507.1 hypothetical protein TorRG33x02_259330 [Trema orientale]4.6e-1151.19Show/hide
Query:  FEENFKNPHASGNTNNQGGNNASSSTYIATPEILNDSKWLADSGATNHVTADASNLAVKNDYNGKDSLVVGDGTKLGISHIGSN
        F+ +F++P  S +  +QG  N+    Y+A P  + DS W  DSGATNHVTAD +NL VK+DY GK+  +V +G KL ISHIGSN
Subjt:  FEENFKNPHASGNTNNQGGNNASSSTYIATPEILNDSKWLADSGATNHVTADASNLAVKNDYNGKDSLVVGDGTKLGISHIGSN

TXG55646.1 hypothetical protein EZV62_020902 [Acer yangbiense]3.0e-1046.99Show/hide
Query:  RFEENFKNPHASGNTNNQGGNNASSSTYIATPEILNDSKWLADSGATNHVTADASNLAVKNDYNGKDSLVVGDGTKLGISHIG
        R+++N+     + N+N       S S ++ATPE ++D+ W ADSGATNHVT DA NL +K++Y G +SL+VG+G +L ISH+G
Subjt:  RFEENFKNPHASGNTNNQGGNNASSSTYIATPEILNDSKWLADSGATNHVTADASNLAVKNDYNGKDSLVVGDGTKLGISHIG

TXG67243.1 hypothetical protein EZV62_008518 [Acer yangbiense]3.0e-1046.99Show/hide
Query:  RFEENFKNPHASGNTNNQGGNNASSSTYIATPEILNDSKWLADSGATNHVTADASNLAVKNDYNGKDSLVVGDGTKLGISHIG
        R+++N+     + N+N       S S ++ATPE ++D+ W ADSGAT+HVT DA NL +K+DY G +SL+VG+G +L ISH+G
Subjt:  RFEENFKNPHASGNTNNQGGNNASSSTYIATPEILNDSKWLADSGATNHVTADASNLAVKNDYNGKDSLVVGDGTKLGISHIG

TXG69253.1 hypothetical protein EZV62_004188 [Acer yangbiense]7.8e-1148.19Show/hide
Query:  RFEENFKNPHASGNTNNQGGNNASSSTYIATPEILNDSKWLADSGATNHVTADASNLAVKNDYNGKDSLVVGDGTKLGISHIG
        R+++N+     + N+N       S S ++ATPE ++D+ W ADSGATNHVT DA NL +K+DY G +SL+VG+G +L ISH+G
Subjt:  RFEENFKNPHASGNTNNQGGNNASSSTYIATPEILNDSKWLADSGATNHVTADASNLAVKNDYNGKDSLVVGDGTKLGISHIG

TrEMBL top hitse value%identityAlignment
A0A2P5D870 Uncharacterized protein2.2e-1151.19Show/hide
Query:  FEENFKNPHASGNTNNQGGNNASSSTYIATPEILNDSKWLADSGATNHVTADASNLAVKNDYNGKDSLVVGDGTKLGISHIGSN
        F+ +F++P  S +  +QG  N+    Y+A P  + DS W  DSGATNHVTAD +NL VK+DY GK+  +V +G KL ISHIGSN
Subjt:  FEENFKNPHASGNTNNQGGNNASSSTYIATPEILNDSKWLADSGATNHVTADASNLAVKNDYNGKDSLVVGDGTKLGISHIGSN

A0A803PEH4 Uncharacterized protein2.4e-1350Show/hide
Query:  RFEENF--KNPHASGNTNNQGGNNASSSTYIATPEILNDSKWLADSGATNHVTADASNLAVKNDYNGKDSLVVGDGTKLGISHIGS
        RF+E++   +P+   N N  G  N + S ++ATPE+L    W ADSGA+NH+T+D +NL  K DYNGK+S+VVG+G+KL I+HIG+
Subjt:  RFEENF--KNPHASGNTNNQGGNNASSSTYIATPEILNDSKWLADSGATNHVTADASNLAVKNDYNGKDSLVVGDGTKLGISHIGS

A0A803PHM7 Uncharacterized protein1.9e-1554.76Show/hide
Query:  RFEENFKNPHASGNTNNQGGNNASSSTYIATPEILNDSKWLADSGATNHVTADASNLAVKNDYNGKDSLVVGDGTKLGISHIGS
        R+ E+F      GNTN+      +++ ++ATPE+L D  W ADSGA+NHVT++A+NL  KN YNGKDSL+VGDG KL I HIGS
Subjt:  RFEENFKNPHASGNTNNQGGNNASSSTYIATPEILNDSKWLADSGATNHVTADASNLAVKNDYNGKDSLVVGDGTKLGISHIGS

A0A803PYD1 Uncharacterized protein7.6e-1245.56Show/hide
Query:  RFEENFKNPHASGNTNNQGGNNASSSTYIATPEILNDSKWLADSGATNHVTADASNLAVKNDYNGKDSLVVGDGTKLGISHIGSNVVKCP
        RF+E++         N         S  +ATP+ L+D  W ADSGATNH+T D+  L  K +Y GK+ ++VGDGTKL I HIGSNV+  P
Subjt:  RFEENFKNPHASGNTNNQGGNNASSSTYIATPEILNDSKWLADSGATNHVTADASNLAVKNDYNGKDSLVVGDGTKLGISHIGSNVVKCP

A0A803QD97 Uncharacterized protein1.1e-1355.81Show/hide
Query:  RFEENFKNPHASGNT--NNQGGNNASSSTYIATPEILNDSKWLADSGATNHVTADASNLAVKNDYNGKDSLVVGDGTKLGISHIGS
        RF+E F      GNT  NN+ G NA++  ++ATPE+L D  W A+SGA+NHVT++A+NL  K  YNGKDSL VGDG+KL I H GS
Subjt:  RFEENFKNPHASGNT--NNQGGNNASSSTYIATPEILNDSKWLADSGATNHVTADASNLAVKNDYNGKDSLVVGDGTKLGISHIGS

SwissProt top hitse value%identityAlignment
Q8S8F8 GLABRA2 expression modulator7.9e-0660.87Show/hide
Query:  MDSVKVVLERWGKRAVEAAKKAEDLVGNMWWHSVGFLDSAPSFAAA
        M++VK VL RWGKR  EAAKK E L GN W H    L +APSFA A
Subjt:  MDSVKVVLERWGKRAVEAAKKAEDLVGNMWWHSVGFLDSAPSFAAA

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE14.3e-0423.39Show/hide
Query:  NDSKWLADSGATNHVTADASNLAVKNDYNGKDSLVVGDGTKLGISHIGSNVVKCPGFGIRIRHLRPRHFPTTWPRYHTHLKLLSRVKTVPTNQHGVLLAC
        + + WL DSGAT+H+T+D +NL++   Y G D ++V DG+ + ISH GS  +      + + ++         P  H +L  + R+     N +GV +  
Subjt:  NDSKWLADSGATNHVTADASNLAVKNDYNGKDSLVVGDGTKLGISHIGSNVVKCPGFGIRIRHLRPRHFPTTWPRYHTHLKLLSRVKTVPTNQHGVLLAC

Query:  FVLTHMLPRKIPMRSPNIELLQAKHAQLQNPSHLDVVSVHSCTPPNSGVTRPPAFALVRPRTHPTGRVASPPSATTHAVASRRLSFQSVYLSLIFLPPSC
        F                             P+   V  +++  P   G T+   +      + P    ASP S  TH+    RL   +         PS 
Subjt:  FVLTHMLPRKIPMRSPNIELLQAKHAQLQNPSHLDVVSVHSCTPPNSGVTRPPAFALVRPRTHPTGRVASPPSATTHAVASRRLSFQSVYLSLIFLPPSC

Query:  LTRSLSQIAPLIYN--HVVNKPTPSLVTPSTVVVVPTDTTPSTIDVPY
        L   +S  +  + N  H     +  L+  S  V     T  ST  + Y
Subjt:  LTRSLSQIAPLIYN--HVVNKPTPSLVTPSTVVVVPTDTTPSTIDVPY

Q9SE96 GEM-like protein 15.4e-0757.78Show/hide
Query:  YQLEHPSIQNTMDSMKVMLGRWGKKAVEATKKVKDLARNMWQHYK
        Y    P+ +NTMDS+K  LG+WGK A +ATKK +DLA N WQH K
Subjt:  YQLEHPSIQNTMDSMKVMLGRWGKKAVEATKKVKDLARNMWQHYK

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE21.5e-0433.75Show/hide
Query:  HASGNTNNQGGNNASSSTY-----IATPEILNDSKWLADSGATNHVTADASNLAVKNDYNGKDSLVVGDGTKLGISHIGS
        H   +T NQ  + +  + +     +A     N + WL DSGAT+H+T+D +NL+    Y G D +++ DG+ + I+H GS
Subjt:  HASGNTNNQGGNNASSSTY-----IATPEILNDSKWLADSGATNHVTADASNLAVKNDYNGKDSLVVGDGTKLGISHIGS

Arabidopsis top hitse value%identityAlignment
AT1G28200.1 FH interacting protein 13.9e-0857.78Show/hide
Query:  YQLEHPSIQNTMDSMKVMLGRWGKKAVEATKKVKDLARNMWQHYK
        Y    P+ +NTMDS+K  LG+WGK A +ATKK +DLA N WQH K
Subjt:  YQLEHPSIQNTMDSMKVMLGRWGKKAVEATKKVKDLARNMWQHYK

AT2G22475.1 GRAM domain family protein5.6e-0760.87Show/hide
Query:  MDSVKVVLERWGKRAVEAAKKAEDLVGNMWWHSVGFLDSAPSFAAA
        M++VK VL RWGKR  EAAKK E L GN W H    L +APSFA A
Subjt:  MDSVKVVLERWGKRAVEAAKKAEDLVGNMWWHSVGFLDSAPSFAAA

AT2G22475.2 GRAM domain family protein5.6e-0760.87Show/hide
Query:  MDSVKVVLERWGKRAVEAAKKAEDLVGNMWWHSVGFLDSAPSFAAA
        M++VK VL RWGKR  EAAKK E L GN W H    L +APSFA A
Subjt:  MDSVKVVLERWGKRAVEAAKKAEDLVGNMWWHSVGFLDSAPSFAAA

AT4G40100.1 GRAM domain family protein1.5e-0451.35Show/hide
Query:  SIQNTMDSMKVMLGRWGKKAVEATKKVKDLARNMWQH
        S++ TM+S+K +LGRWG++  EA  K + LA N WQH
Subjt:  SIQNTMDSMKVMLGRWGKKAVEATKKVKDLARNMWQH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGGTTTGAAGAGAACTTCAAAAATCCTCATGCCTCTGGAAATACAAACAATCAAGGAGGAAACAATGCAAGTTCGTCTACATATATTGCCACGCCAGAGATTCTCAA
TGATTCTAAATGGTTAGCTGATAGCGGAGCAACTAATCATGTGACAGCCGATGCAAGTAACTTAGCAGTGAAAAATGATTATAATGGTAAAGATTCTTTGGTTGTTGGTG
ATGGGACAAAACTAGGGATTAGTCATATTGGTAGTAATGTTGTGAAATGCCCAGGATTCGGAATCCGGATTCGGCACTTAAGGCCCCGACATTTCCCTACGACTTGGCCA
CGTTACCATACTCATCTTAAACTGCTTTCAAGAGTGAAGACTGTCCCCACAAACCAACACGGGGTCCTTTTAGCATGCTTTGTCCTCACTCACATGCTCCCTAGGAAAAT
TCCCATGAGGTCACCCAACATAGAACTTCTCCAAGCCAAACATGCTCAACTTCAAAATCCCTCTCATTTGGATGTGGTCTCGGTTCATTCATGTACCCCTCCTAACTCAG
GTGTTACACGCCCACCAGCTTTCGCCTTGGTTCGTCCCCGAACCCATCCTACTGGGAGAGTAGCGTCGCCGCCTTCCGCCACGACCCACGCCGTTGCGAGCCGCCGCCTC
TCCTTCCAGTCAGTCTATCTCTCTCTCATCTTCCTGCCTCCCTCTTGTCTCACACGTTCTCTCTCTCAAATCGCTCCTCTCATCTACAATCATGTCGTCAACAAACCCAC
ACCGTCGCTAGTCACGCCAAGCACCGTTGTTGTTGTTCCAACTGACACCACGCCGAGTACTATCGATGTCCCTTACCCATTTTATTCTGGCTCCACATTTCACTGTGCAG
CGACTGTTTGGCTAACTGTTATTATTGAGTTCCAAGGCAAGGGCGAGAACGTGTTAGGCGACAGATCAAGAGCACTTGTTGGTGGTGCCATGGTGGACGGTCTCAGCATA
TTTTACTTCCGTATATTAGACAAGGTTTCAAAGAGGGTGATGTTGAAAGGAACTCTTAAGAATAGTCTTTATCAACTTGAGCATCCTTCAATTCAAAATACGATGGATTC
CATGAAGGTGATGCTTGGAAGATGGGGAAAGAAGGCAGTTGAGGCAACCAAAAAGGTCAAGGATCTTGCTAGGAATATGTGGCAACACTATAAGATGGATTCTGTGAAGG
TGGTGCTTGAAAGATGGGGAAAGAGGGCAGTTGAGGCAGCCAAGAAGGCCGAGGATCTTGTTGGGAATATGTGGTGGCACAGTGTTGGGTTCCTAGATTCTGCTCCCAGT
TTTGCTGCAGCACAGAATTTGCTTCCTCAAGTCGCCCAGCTTGATAATCTGCACAAAAAACTTACTGAAGAAGCTGAAGAGGGCACCACCTCAAACGAAGCTGAAAAGCT
TAATCCTGAGTCTTCTATCCCTTCTCCTACTATTGTAGTTCCAACCCCTCAGCCATTTGTTGCAGCCGCACCGCCCTCCCTTGCGCCGCCGTCTAGAACAGCAGCAGTGC
CACCTCCCTTGTCGTCGTCGTCACGCCTGAGTGTGAGTCGTCGCTCCCGTTTGGTCAGCCAATCTCGCCGCACCGCCCCTTCGCGCGATTCCTCTCCCGCGACGCCTCCC
TCCGCGAGCCCCCTCTCTTTGGTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTCTCTCGTGAGGCTATCTCGTGTGGACAGCAGCTCGAAGCGTCGTCCTCTCTGCGT
TTCAGCCTTAAAAACCTTGGATCTCGCGTGTCTAGCGATTCGGAGTTCCGTCGACCTCGTTTCAGTCAATTCCGCCTCTGTCCAGCAGCGTTTTTGGGTGTTTTCGGCAC
CGCTTGGCTATTCCGTGTCGCCTAGTGTGTTCGATTGGGTTCAATACACTTCAAACTCAAGTACCCACTGCCCAAGGATCGTTCTAGCGCCTCGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCGGTTTGAAGAGAACTTCAAAAATCCTCATGCCTCTGGAAATACAAACAATCAAGGAGGAAACAATGCAAGTTCGTCTACATATATTGCCACGCCAGAGATTCTCAA
TGATTCTAAATGGTTAGCTGATAGCGGAGCAACTAATCATGTGACAGCCGATGCAAGTAACTTAGCAGTGAAAAATGATTATAATGGTAAAGATTCTTTGGTTGTTGGTG
ATGGGACAAAACTAGGGATTAGTCATATTGGTAGTAATGTTGTGAAATGCCCAGGATTCGGAATCCGGATTCGGCACTTAAGGCCCCGACATTTCCCTACGACTTGGCCA
CGTTACCATACTCATCTTAAACTGCTTTCAAGAGTGAAGACTGTCCCCACAAACCAACACGGGGTCCTTTTAGCATGCTTTGTCCTCACTCACATGCTCCCTAGGAAAAT
TCCCATGAGGTCACCCAACATAGAACTTCTCCAAGCCAAACATGCTCAACTTCAAAATCCCTCTCATTTGGATGTGGTCTCGGTTCATTCATGTACCCCTCCTAACTCAG
GTGTTACACGCCCACCAGCTTTCGCCTTGGTTCGTCCCCGAACCCATCCTACTGGGAGAGTAGCGTCGCCGCCTTCCGCCACGACCCACGCCGTTGCGAGCCGCCGCCTC
TCCTTCCAGTCAGTCTATCTCTCTCTCATCTTCCTGCCTCCCTCTTGTCTCACACGTTCTCTCTCTCAAATCGCTCCTCTCATCTACAATCATGTCGTCAACAAACCCAC
ACCGTCGCTAGTCACGCCAAGCACCGTTGTTGTTGTTCCAACTGACACCACGCCGAGTACTATCGATGTCCCTTACCCATTTTATTCTGGCTCCACATTTCACTGTGCAG
CGACTGTTTGGCTAACTGTTATTATTGAGTTCCAAGGCAAGGGCGAGAACGTGTTAGGCGACAGATCAAGAGCACTTGTTGGTGGTGCCATGGTGGACGGTCTCAGCATA
TTTTACTTCCGTATATTAGACAAGGTTTCAAAGAGGGTGATGTTGAAAGGAACTCTTAAGAATAGTCTTTATCAACTTGAGCATCCTTCAATTCAAAATACGATGGATTC
CATGAAGGTGATGCTTGGAAGATGGGGAAAGAAGGCAGTTGAGGCAACCAAAAAGGTCAAGGATCTTGCTAGGAATATGTGGCAACACTATAAGATGGATTCTGTGAAGG
TGGTGCTTGAAAGATGGGGAAAGAGGGCAGTTGAGGCAGCCAAGAAGGCCGAGGATCTTGTTGGGAATATGTGGTGGCACAGTGTTGGGTTCCTAGATTCTGCTCCCAGT
TTTGCTGCAGCACAGAATTTGCTTCCTCAAGTCGCCCAGCTTGATAATCTGCACAAAAAACTTACTGAAGAAGCTGAAGAGGGCACCACCTCAAACGAAGCTGAAAAGCT
TAATCCTGAGTCTTCTATCCCTTCTCCTACTATTGTAGTTCCAACCCCTCAGCCATTTGTTGCAGCCGCACCGCCCTCCCTTGCGCCGCCGTCTAGAACAGCAGCAGTGC
CACCTCCCTTGTCGTCGTCGTCACGCCTGAGTGTGAGTCGTCGCTCCCGTTTGGTCAGCCAATCTCGCCGCACCGCCCCTTCGCGCGATTCCTCTCCCGCGACGCCTCCC
TCCGCGAGCCCCCTCTCTTTGGTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTCTCTCGTGAGGCTATCTCGTGTGGACAGCAGCTCGAAGCGTCGTCCTCTCTGCGT
TTCAGCCTTAAAAACCTTGGATCTCGCGTGTCTAGCGATTCGGAGTTCCGTCGACCTCGTTTCAGTCAATTCCGCCTCTGTCCAGCAGCGTTTTTGGGTGTTTTCGGCAC
CGCTTGGCTATTCCGTGTCGCCTAGTGTGTTCGATTGGGTTCAATACACTTCAAACTCAAGTACCCACTGCCCAAGGATCGTTCTAGCGCCTCGTTAG
Protein sequenceShow/hide protein sequence
MRFEENFKNPHASGNTNNQGGNNASSSTYIATPEILNDSKWLADSGATNHVTADASNLAVKNDYNGKDSLVVGDGTKLGISHIGSNVVKCPGFGIRIRHLRPRHFPTTWP
RYHTHLKLLSRVKTVPTNQHGVLLACFVLTHMLPRKIPMRSPNIELLQAKHAQLQNPSHLDVVSVHSCTPPNSGVTRPPAFALVRPRTHPTGRVASPPSATTHAVASRRL
SFQSVYLSLIFLPPSCLTRSLSQIAPLIYNHVVNKPTPSLVTPSTVVVVPTDTTPSTIDVPYPFYSGSTFHCAATVWLTVIIEFQGKGENVLGDRSRALVGGAMVDGLSI
FYFRILDKVSKRVMLKGTLKNSLYQLEHPSIQNTMDSMKVMLGRWGKKAVEATKKVKDLARNMWQHYKMDSVKVVLERWGKRAVEAAKKAEDLVGNMWWHSVGFLDSAPS
FAAAQNLLPQVAQLDNLHKKLTEEAEEGTTSNEAEKLNPESSIPSPTIVVPTPQPFVAAAPPSLAPPSRTAAVPPPLSSSSRLSVSRRSRLVSQSRRTAPSRDSSPATPP
SASPLSLVSLSLSLSLFLSLVRLSRVDSSSKRRPLCVSALKTLDLACLAIRSSVDLVSVNSASVQQRFWVFSAPLGYSVSPSVFDWVQYTSNSSTHCPRIVLAPR