| GenBank top hits | e value | %identity | Alignment |
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| KAG7567709.1 Reverse transcriptase domain [Arabidopsis thaliana x Arabidopsis arenosa] | 5.6e-47 | 52.05 | Show/hide |
Query: MAVKLDMGKAYDKVEWLFLERVMRVMGFDARWIGWIMECVTLVSYSLRVSNKPYGMIRSERGLRQGDPLSPYLFVLCSEVLTFLLNEVIGCNQLSRYKVS
+A+K D+ KAYD+VEW FLERVM MGFD++W+ WIMECV VSY + ++ PYG I+ RGLRQGDPLSPYLF+ C+EVL+ +L+ + Q+ K+
Subjt: MAVKLDMGKAYDKVEWLFLERVMRVMGFDARWIGWIMECVTLVSYSLRVSNKPYGMIRSERGLRQGDPLSPYLFVLCSEVLTFLLNEVIGCNQLSRYKVS
Query: RNGPTISNIFFADDSLIFCSATKEECVKLLVVLARYGELSGQLVNFDKSNVIFSRNTPTEVRERLAGLLGI
R P IS++ FADDSL FC AT+ C + + RY E+SGQ++N+ KS+VIF P R RL +LGI
Subjt: RNGPTISNIFFADDSLIFCSATKEECVKLLVVLARYGELSGQLVNFDKSNVIFSRNTPTEVRERLAGLLGI
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| KAG7586949.1 Reverse transcriptase domain [Arabidopsis thaliana x Arabidopsis arenosa] | 9.5e-47 | 48.37 | Show/hide |
Query: MNRRRKGRKYSMAVKLDMGKAYDKVEWLFLERVMRVMGFDARWIGWIMECVTLVSYSLRVSNKPYGMIRSERGLRQGDPLSPYLFVLCSEVLTFLLNEVI
+ +++ + +A+K D+ KAYD+VEW FLER+M MGFD +W+ WIMECV VSY + ++ PYG I+ RGLRQGDPLSPYLF+ C+EVL+ +L++ +
Subjt: MNRRRKGRKYSMAVKLDMGKAYDKVEWLFLERVMRVMGFDARWIGWIMECVTLVSYSLRVSNKPYGMIRSERGLRQGDPLSPYLFVLCSEVLTFLLNEVI
Query: GCNQLSRYKVSRNGPTISNIFFADDSLIFCSATKEECVKLLVVLARYGELSGQLVNFDKSNVIFSRNTPTEVRERLAGLLGIRH
Q+ K+ R P IS++ FADDSL FC AT+ C + + RY E+SGQ++N+ KS+VIF P R RL +LGI H
Subjt: GCNQLSRYKVSRNGPTISNIFFADDSLIFCSATKEECVKLLVVLARYGELSGQLVNFDKSNVIFSRNTPTEVRERLAGLLGIRH
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| KAG7595246.1 Reverse transcriptase domain [Arabidopsis thaliana x Arabidopsis arenosa] | 1.4e-45 | 48.09 | Show/hide |
Query: RRRKGRKYSMAVKLDMGKAYDKVEWLFLERVMRVMGFDARWIGWIMECVTLVSYSLRVSNKPYGMIRSERGLRQGDPLSPYLFVLCSEVLTFLLNEVIGC
R +K + MA+KLD+ KA+DKVEW ++E V++ +GF +W W+M+C+ VSYS+ ++ P I RGLRQGDPLSPYL++LC+E L+ LL+ +
Subjt: RRRKGRKYSMAVKLDMGKAYDKVEWLFLERVMRVMGFDARWIGWIMECVTLVSYSLRVSNKPYGMIRSERGLRQGDPLSPYLFVLCSEVLTFLLNEVIGC
Query: NQLSRYKVSRNGPTISNIFFADDSLIFCSATKEECVKLLVVLARYGELSGQLVNFDKSNVIFSRNTPTEVRERLAGLLGIRHT
NQ+ +K SR+GP+IS++FFADDSL+FC A + EC KLL +L Y + SGQ +NF KS +IF + P+EV+ + + GI T
Subjt: NQLSRYKVSRNGPTISNIFFADDSLIFCSATKEECVKLLVVLARYGELSGQLVNFDKSNVIFSRNTPTEVRERLAGLLGIRHT
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| XP_023920446.1 uncharacterized protein LOC112031976 [Quercus suber] | 2.5e-47 | 51.65 | Show/hide |
Query: MNRRRKGRKYSMAVKLDMGKAYDKVEWLFLERVMRVMGFDARWIGWIMECVTLVSYSLRVSNKPYGMIRSERGLRQGDPLSPYLFVLCSEVLTFLLNEVI
M R+R G+ MA+KLDM KAYD++EW+FL+R+M MGF ++WIGWIMECV V YS+ V+ +P G I RG+RQGDPLSPYLF+LCSE L L+ +
Subjt: MNRRRKGRKYSMAVKLDMGKAYDKVEWLFLERVMRVMGFDARWIGWIMECVTLVSYSLRVSNKPYGMIRSERGLRQGDPLSPYLFVLCSEVLTFLLNEVI
Query: GCNQLSRYKVSRNGPTISNIFFADDSLIFCSATKEECVKLLVVLARYGELSGQLVNFDKSNVIFSRNTPTEVRERLAGLLGI
C + + RNGP IS+IFFADDSL+FC A + K+ L +Y SGQ +N DK+ + FS+NT +E L LLG+
Subjt: GCNQLSRYKVSRNGPTISNIFFADDSLIFCSATKEECVKLLVVLARYGELSGQLVNFDKSNVIFSRNTPTEVRERLAGLLGI
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| XP_027118380.1 uncharacterized protein LOC113735584 [Coffea arabica] | 1.2e-46 | 49.72 | Show/hide |
Query: MNRRRKGRKYSMAVKLDMGKAYDKVEWLFLERVMRVMGFDARWIGWIMECVTLVSYSLRVSNKPYGMIRSERGLRQGDPLSPYLFVLCSEVLTFLLNEVI
+N +R+G+ MAVKLDM KAYD+VEW FLE +M+ MGF RWI WIMECV VSYS ++ + + RG+RQGDPLSPYLF+LCSE + L+ +
Subjt: MNRRRKGRKYSMAVKLDMGKAYDKVEWLFLERVMRVMGFDARWIGWIMECVTLVSYSLRVSNKPYGMIRSERGLRQGDPLSPYLFVLCSEVLTFLLNEVI
Query: GCNQLSRYKVSRNGPTISNIFFADDSLIFCSATKEECVKLLVVLARYGELSGQLVNFDKSNVIFSRNTPTEVRERLAGLLG
++S K+SR GP+I+++FFADDSLIFC A K++ +L+ VL Y + SGQL+N DKS+++FS+N ++ + ++G
Subjt: GCNQLSRYKVSRNGPTISNIFFADDSLIFCSATKEECVKLLVVLARYGELSGQLVNFDKSNVIFSRNTPTEVRERLAGLLG
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| TrEMBL top hits | e value | %identity | Alignment |
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| A0A2N9EV43 Reverse transcriptase domain-containing protein | 2.7e-47 | 51.37 | Show/hide |
Query: MNRRRKGRKYSMAVKLDMGKAYDKVEWLFLERVMRVMGFDARWIGWIMECVTLVSYSLRVSNKPYGMIRSERGLRQGDPLSPYLFVLCSEVLTFLLNEVI
+ RRKG+ MA+KLDM KAYD+VEW FLERVM+ MGF++RWI +M CV SYS+ ++ +P G I+ RG+RQGDPLSPYLF+ C+E LT LL +
Subjt: MNRRRKGRKYSMAVKLDMGKAYDKVEWLFLERVMRVMGFDARWIGWIMECVTLVSYSLRVSNKPYGMIRSERGLRQGDPLSPYLFVLCSEVLTFLLNEVI
Query: GCNQLSRYKVSRNGPTISNIFFADDSLIFCSATKEECVKLLVVLARYGELSGQLVNFDKSNVIFSRNTPTEVRERLAGLLGIR
+++ + R GP IS++ FADDSL+FC A+ EC +LL VL Y + SGQ+VN DK+ + FS+NTP +R+ + L G+R
Subjt: GCNQLSRYKVSRNGPTISNIFFADDSLIFCSATKEECVKLLVVLARYGELSGQLVNFDKSNVIFSRNTPTEVRERLAGLLGIR
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| A0A2N9FDP4 Reverse transcriptase domain-containing protein | 2.1e-47 | 52.43 | Show/hide |
Query: MNRRRKGRKYSMAVKLDMGKAYDKVEWLFLERVMRVMGFDARWIGWIMECVTLVSYSLRVSNKPYGMIRSERGLRQGDPLSPYLFVLCSEVLTFLLNEVI
+ RRKG+ MA+KLDM KAYD+VEW+FLERVM MGF +RWI +M CV SYS+ ++ +P G I+ RG+RQGDPLSPYLF+LC+E L+ LL
Subjt: MNRRRKGRKYSMAVKLDMGKAYDKVEWLFLERVMRVMGFDARWIGWIMECVTLVSYSLRVSNKPYGMIRSERGLRQGDPLSPYLFVLCSEVLTFLLNEVI
Query: GCNQLSRYKVSRNGPTISNIFFADDSLIFCSATKEECVKLLVVLARYGELSGQLVNFDKSNVIFSRNTPTEVRERLAGLLGIRHT
Q+ + RNGP IS++ FADDSL+FC AT+EEC +L+ VLA+Y S Q+VN +K+ + FS+NTP VR + L G++ T
Subjt: GCNQLSRYKVSRNGPTISNIFFADDSLIFCSATKEECVKLLVVLARYGELSGQLVNFDKSNVIFSRNTPTEVRERLAGLLGIRHT
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| A0A2N9HN71 Reverse transcriptase domain-containing protein | 2.7e-47 | 51.37 | Show/hide |
Query: MNRRRKGRKYSMAVKLDMGKAYDKVEWLFLERVMRVMGFDARWIGWIMECVTLVSYSLRVSNKPYGMIRSERGLRQGDPLSPYLFVLCSEVLTFLLNEVI
+ RRKG+ MA+KLDM KAYD+VEW FLERVM+ MGF++RWI +M CV SYS+ ++ +P G I+ RG+RQGDPLSPYLF+ C+E LT LL +
Subjt: MNRRRKGRKYSMAVKLDMGKAYDKVEWLFLERVMRVMGFDARWIGWIMECVTLVSYSLRVSNKPYGMIRSERGLRQGDPLSPYLFVLCSEVLTFLLNEVI
Query: GCNQLSRYKVSRNGPTISNIFFADDSLIFCSATKEECVKLLVVLARYGELSGQLVNFDKSNVIFSRNTPTEVRERLAGLLGIR
+++ + R GP IS++ FADDSL+FC A+ EC +LL VL Y + SGQ+VN DK+ + FS+NTP +R+ + L G+R
Subjt: GCNQLSRYKVSRNGPTISNIFFADDSLIFCSATKEECVKLLVVLARYGELSGQLVNFDKSNVIFSRNTPTEVRERLAGLLGIR
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| A0A2N9HPA9 Reverse transcriptase domain-containing protein | 2.1e-47 | 51.35 | Show/hide |
Query: MNRRRKGRKYSMAVKLDMGKAYDKVEWLFLERVMRVMGFDARWIGWIMECVTLVSYSLRVSNKPYGMIRSERGLRQGDPLSPYLFVLCSEVLTFLLNEVI
+ RRKG+ MA+KLDM KAYD+VEW FLERVM+ MGF RWI +M CV SYS+ V+ +P G I+ RG+RQGDPLSPYLF+LC+E L+ +L +V
Subjt: MNRRRKGRKYSMAVKLDMGKAYDKVEWLFLERVMRVMGFDARWIGWIMECVTLVSYSLRVSNKPYGMIRSERGLRQGDPLSPYLFVLCSEVLTFLLNEVI
Query: GCNQLSRYKVSRNGPTISNIFFADDSLIFCSATKEECVKLLVVLARYGELSGQLVNFDKSNVIFSRNTPTEVRERLAGLLGIRHT
Q+S + R P IS++ FADDS++FC A+ EEC +LL +LARY + SGQ+VN K+ + FS+NTP V+ + + G++ T
Subjt: GCNQLSRYKVSRNGPTISNIFFADDSLIFCSATKEECVKLLVVLARYGELSGQLVNFDKSNVIFSRNTPTEVRERLAGLLGIRHT
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| A0A6P6WSS6 uncharacterized protein LOC113735584 | 6.0e-47 | 49.72 | Show/hide |
Query: MNRRRKGRKYSMAVKLDMGKAYDKVEWLFLERVMRVMGFDARWIGWIMECVTLVSYSLRVSNKPYGMIRSERGLRQGDPLSPYLFVLCSEVLTFLLNEVI
+N +R+G+ MAVKLDM KAYD+VEW FLE +M+ MGF RWI WIMECV VSYS ++ + + RG+RQGDPLSPYLF+LCSE + L+ +
Subjt: MNRRRKGRKYSMAVKLDMGKAYDKVEWLFLERVMRVMGFDARWIGWIMECVTLVSYSLRVSNKPYGMIRSERGLRQGDPLSPYLFVLCSEVLTFLLNEVI
Query: GCNQLSRYKVSRNGPTISNIFFADDSLIFCSATKEECVKLLVVLARYGELSGQLVNFDKSNVIFSRNTPTEVRERLAGLLG
++S K+SR GP+I+++FFADDSLIFC A K++ +L+ VL Y + SGQL+N DKS+++FS+N ++ + ++G
Subjt: GCNQLSRYKVSRNGPTISNIFFADDSLIFCSATKEECVKLLVVLARYGELSGQLVNFDKSNVIFSRNTPTEVRERLAGLLG
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| SwissProt top hits | e value | %identity | Alignment |
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| P11369 LINE-1 retrotransposable element ORF2 protein | 4.6e-12 | 27.44 | Show/hide |
Query: KYSMAVKLDMGKAYDKVEWLFLERVMRVMGFDARWIGWIMECVTLVSYSLRVSNKPYGMIRSERGLRQGDPLSPYLFVLCSEVLTFLLNEVIGCNQLSRY
K M + LD KA+DK++ F+ +V+ G ++ I + +++V+ + I + G RQG PLSPYLF + EVL + + ++
Subjt: KYSMAVKLDMGKAYDKVEWLFLERVMRVMGFDARWIGWIMECVTLVSYSLRVSNKPYGMIRSERGLRQGDPLSPYLFVLCSEVLTFLLNEVIGCNQLSRY
Query: KVSRNGPTISNIFFADDSLIFCSATKEECVKLLVVLARYGELSGQLVNFDKSNV-IFSRNTPTE
++ + IS ADD +++ S K +LL ++ +GE+ G +N +KS ++++N E
Subjt: KVSRNGPTISNIFFADDSLIFCSATKEECVKLLVVLARYGELSGQLVNFDKSNV-IFSRNTPTE
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| P16423 Retrovirus-related Pol polyprotein from type-2 retrotransposable element R2DM | 6.1e-04 | 24.36 | Show/hide |
Query: LDMGKAYDKVEWLFLERVMRVMGFDARWIGWIMECVTLVSYSLRVSNKPYGMIRSERGLRQGDPLSPYLFVLCSEVLTFLLNEVIGCNQLSRYKVSRNGP
LD+ KA+D + + +R G ++ ++ SL RG++QGDPLSP LF L + L L IG ++ G
Subjt: LDMGKAYDKVEWLFLERVMRVMGFDARWIGWIMECVTLVSYSLRVSNKPYGMIRSERGLRQGDPLSPYLFVLCSEVLTFLLNEVIGCNQLSRYKVSRNGP
Query: TISNIFFADDSLIFCSATKEECVKLLVVLARYGELSGQLVNFDKSNVIFSRNTPTE
I+N D L+ + T+ LL + + G +N DK + + P +
Subjt: TISNIFFADDSLIFCSATKEECVKLLVVLARYGELSGQLVNFDKSNVIFSRNTPTE
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| P92555 Uncharacterized mitochondrial protein AtMg01250 | 2.7e-12 | 47.76 | Show/hide |
Query: VSNKPYGMIRSERGLRQGDPLSPYLFVLCSEVLTFLLNEVIGCNQLSRYKVSRNGPTISNIFFADDS
++ P G++ RGLRQGDPLSPYLF+LC+EVL+ L +L +VS N P I+++ FADD+
Subjt: VSNKPYGMIRSERGLRQGDPLSPYLFVLCSEVLTFLLNEVIGCNQLSRYKVSRNGPTISNIFFADDS
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| Q03274 Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 (Fragment) | 2.5e-05 | 29.41 | Show/hide |
Query: MNRRRKGRKYSMAVKLDMGKAYDKVEWLFLERVMRVMGFDARWIGWIMECVTLVSYSLRVS-NKPYGMIRSERGLRQGDPLSPYLF------VLCSEVLT
++ RR+ RK V LD+ KA+D V + R ++ +G D +I ++ + ++RV I RG++QGDPLSP+LF +LCS T
Subjt: MNRRRKGRKYSMAVKLDMGKAYDKVEWLFLERVMRVMGFDARWIGWIMECVTLVSYSLRVS-NKPYGMIRSERGLRQGDPLSPYLF------VLCSEVLT
Query: FLLNEVIGCNQLSRYKVSRNGPTISNIFFADDSLIFCSATKEECVKL---LVVLARYGELSGQLVNFDKS
+ IG ++ P ++ FADD L+ ++ V L L +A + L G +N KS
Subjt: FLLNEVIGCNQLSRYKVSRNGPTISNIFFADDSLIFCSATKEECVKL---LVVLARYGELSGQLVNFDKS
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| Q05118 Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 (Fragment) | 2.8e-09 | 34.65 | Show/hide |
Query: RRRKGRKYSMAVKLDMGKAYDKVEWLFLERVMRVMGFDARWIGWIMECVTLVSYSLRVSNKPYGMIRSERGLRQGDPLSPYLF-VLCSEVLTFLLNEVIG
RR KG+ Y++ V LD+ KA+D V + R MR G D +IM +T ++ V + I G++QGDPLSP LF ++ E++T L +E G
Subjt: RRRKGRKYSMAVKLDMGKAYDKVEWLFLERVMRVMGFDARWIGWIMECVTLVSYSLRVSNKPYGMIRSERGLRQGDPLSPYLF-VLCSEVLTFLLNEVIG
Query: CNQLSRYKVSRNGPTISNIFFADDSLI
+ K I+++ FADD L+
Subjt: CNQLSRYKVSRNGPTISNIFFADDSLI
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