; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0008527 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0008527
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr9:24522833..24523529
RNA-Seq ExpressionLag0008527
SyntenyLag0008527
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4274760.1 unnamed protein product [Prunus armeniaca]7.9e-3337.44Show/hide
Query:  KLRRRLDDRLKGWAGRFLSQARKDVLVKVVALAIPVYTMNCFKLPMLVCKEIN--------------------------------------------TLL
        ++RR+LD +L GWA +FLS A K+VL+K VA+A+P YTM+CFKLP+ +CKEI                                              LL
Subjt:  KLRRRLDDRLKGWAGRFLSQARKDVLVKVVALAIPVYTMNCFKLPMLVCKEIN--------------------------------------------TLL

Query:  AKQGWRILTKSDSWVAIIYKAKYLRQKSFLEVEAGDSALWGWKSILAGRVVLRQGVRWSIGVNPEVDIWRDSWLPRPFTFRPMRCLDDEWQMAIEFIDGS
        AK GWRIL    S +A +   KY    SFL   +  S+ WGWK IL GR +L  G+RW IG    V +  D WLP P+TFR +    D   M  E ID  
Subjt:  AKQGWRILTKSDSWVAIIYKAKYLRQKSFLEVEAGDSALWGWKSILAGRVVLRQGVRWSIGVNPEVDIWRDSWLPRPFTFRPMRCLDDEWQMAIEFIDGS

Query:  GPKWNEKRLRKCLVGEDVEMTLAIPLS
           W +  + +C V E+    L+IP+S
Subjt:  GPKWNEKRLRKCLVGEDVEMTLAIPLS

CAB4303756.1 unnamed protein product [Prunus armeniaca]7.9e-3337.44Show/hide
Query:  KLRRRLDDRLKGWAGRFLSQARKDVLVKVVALAIPVYTMNCFKLPMLVCKEIN--------------------------------------------TLL
        ++ R+LDD+L GWA +FLS A K+VL+K VA+A+P YTM+ FKLP+ +CKEI                                             TLL
Subjt:  KLRRRLDDRLKGWAGRFLSQARKDVLVKVVALAIPVYTMNCFKLPMLVCKEIN--------------------------------------------TLL

Query:  AKQGWRILTKSDSWVAIIYKAKYLRQKSFLEVEAGDSALWGWKSILAGRVVLRQGVRWSIGVNPEVDIWRDSWLPRPFTFRPMRCLDDEWQMAIEFIDGS
        AK GWRIL    S +A +   KY    SFL   +  S+ WGWK IL GR +L  G+RW IG    V +  D WLP P+TFR +    D   M  E ID  
Subjt:  AKQGWRILTKSDSWVAIIYKAKYLRQKSFLEVEAGDSALWGWKSILAGRVVLRQGVRWSIGVNPEVDIWRDSWLPRPFTFRPMRCLDDEWQMAIEFIDGS

Query:  GPKWNEKRLRKCLVGEDVEMTLAIPLS
           W +  + +C V E+    L+IP+S
Subjt:  GPKWNEKRLRKCLVGEDVEMTLAIPLS

XP_042939230.1 uncharacterized protein LOC122274265 isoform X9 [Carya illinoinensis]1.3e-3034.35Show/hide
Query:  LRRRLDDRLKGWAGRFLSQARKDVLVKVVALAIPVYTMNCFKLPMLVCKEIN--------------------------------------------TLLA
        L+ R+  R+  W  RFLSQA K+VL+K V  +IP YTM  FKLP  +CK+IN                                             LLA
Subjt:  LRRRLDDRLKGWAGRFLSQARKDVLVKVVALAIPVYTMNCFKLPMLVCKEIN--------------------------------------------TLLA

Query:  KQGWRILTKSDSWVAIIYKAKYLRQKSFLEVEAGDSALWGWKSILAGRVVLRQGVRWSIGVNPEVDIWRDSWLPRPFTF---RPMRCLDDEWQMAIEFID
        KQGWRIL    S  A+I++ KY R  SF+E + G      W+SI + R +L++G+RW +G   E+ IW   WL  P ++    P++ L ++ ++  E ID
Subjt:  KQGWRILTKSDSWVAIIYKAKYLRQKSFLEVEAGDSALWGWKSILAGRVVLRQGVRWSIGVNPEVDIWRDSWLPRPFTF---RPMRCLDDEWQMAIEFID

Query:  GSGPKWNEKRLRKCLVGEDVEMTLAIPLSS
            +W+E ++R+  V E+ E+ L++PLSS
Subjt:  GSGPKWNEKRLRKCLVGEDVEMTLAIPLSS

XP_042962692.1 uncharacterized protein LOC122296963 [Carya illinoinensis]1.3e-3034.35Show/hide
Query:  LRRRLDDRLKGWAGRFLSQARKDVLVKVVALAIPVYTMNCFKLPMLVCKEIN--------------------------------------------TLLA
        L+ R+  R+  W  RFLSQA K+VL+K V  +IP YTM  FKLP  +CK+IN                                             LLA
Subjt:  LRRRLDDRLKGWAGRFLSQARKDVLVKVVALAIPVYTMNCFKLPMLVCKEIN--------------------------------------------TLLA

Query:  KQGWRILTKSDSWVAIIYKAKYLRQKSFLEVEAGDSALWGWKSILAGRVVLRQGVRWSIGVNPEVDIWRDSWLPRPFTF---RPMRCLDDEWQMAIEFID
        KQGWRIL    S  A+I++ KY R  SF+E + G      W+SI + R +L++G+RW +G   E+ IW   WL  P ++    P++ L ++ ++  E ID
Subjt:  KQGWRILTKSDSWVAIIYKAKYLRQKSFLEVEAGDSALWGWKSILAGRVVLRQGVRWSIGVNPEVDIWRDSWLPRPFTF---RPMRCLDDEWQMAIEFID

Query:  GSGPKWNEKRLRKCLVGEDVEMTLAIPLSS
            +W+E ++R+  V E+ E+ L++PLSS
Subjt:  GSGPKWNEKRLRKCLVGEDVEMTLAIPLSS

XP_042979975.1 uncharacterized protein LOC122310162 [Carya illinoinensis]1.3e-3034.35Show/hide
Query:  LRRRLDDRLKGWAGRFLSQARKDVLVKVVALAIPVYTMNCFKLPMLVCKEIN--------------------------------------------TLLA
        L+ R+  R+  W  RFLSQA K+VL+K V  +IP YTM  FKLP  +CK+IN                                             LLA
Subjt:  LRRRLDDRLKGWAGRFLSQARKDVLVKVVALAIPVYTMNCFKLPMLVCKEIN--------------------------------------------TLLA

Query:  KQGWRILTKSDSWVAIIYKAKYLRQKSFLEVEAGDSALWGWKSILAGRVVLRQGVRWSIGVNPEVDIWRDSWLPRPFTF---RPMRCLDDEWQMAIEFID
        KQGWRIL    S  A+I++ KY R  SF+E + G      W+SI + R +L++G+RW +G   E+ IW   WL  P ++    P++ L ++ ++  E ID
Subjt:  KQGWRILTKSDSWVAIIYKAKYLRQKSFLEVEAGDSALWGWKSILAGRVVLRQGVRWSIGVNPEVDIWRDSWLPRPFTF---RPMRCLDDEWQMAIEFID

Query:  GSGPKWNEKRLRKCLVGEDVEMTLAIPLSS
            +W+E ++R+  V E+ E+ L++PLSS
Subjt:  GSGPKWNEKRLRKCLVGEDVEMTLAIPLSS

TrEMBL top hitse value%identityAlignment
A0A2N9FCF2 CCHC-type domain-containing protein3.3e-2935.78Show/hide
Query:  KLRRRLDDRLKGWAGRFLSQARKDVLVKVVALAIPVYTMNCFKLPMLVCKE-------------------INTLLAKQGWRILTKSDSWVAIIYKAKYLR
        +++ R+  RL+GW    LSQA +++L+K V  AIP Y M+CFKLP  +C E                   I  LLA+QGWR+L    S +    KAKY  
Subjt:  KLRRRLDDRLKGWAGRFLSQARKDVLVKVVALAIPVYTMNCFKLPMLVCKE-------------------INTLLAKQGWRILTKSDSWVAIIYKAKYLR

Query:  QKSFLEVEAGDSALWGWKSILAGRVVLRQGVRWSIGVNPEVDIWRDSWLPRPFTFRPMRCLDDEWQMAI--EFIDGSGPKWNEKRLRKCLVGEDVEMTLA
           FLE +   +  + W+SI   R VLR G+RW +G   ++ IW+D+WLP P TF+ +  ++     A     ID +  +WN  +L +  +  DV +   
Subjt:  QKSFLEVEAGDSALWGWKSILAGRVVLRQGVRWSIGVNPEVDIWRDSWLPRPFTFRPMRCLDDEWQMAI--EFIDGSGPKWNEKRLRKCLVGEDVEMTLA

Query:  IPLS
        IPLS
Subjt:  IPLS

A0A5B7B1V7 zf-RVT domain-containing protein (Fragment)2.3e-3033.91Show/hide
Query:  MVGKLRRRLDDRLKGWAGRFLSQARKDVLVKVVALAIPVYTMNCFKLPMLVCKEINT-------------------------------------------
        ++  +R R+  +++GW  + LS A K+V++K VA AIP Y M+CF+LP+ +CK IN+                                           
Subjt:  MVGKLRRRLDDRLKGWAGRFLSQARKDVLVKVVALAIPVYTMNCFKLPMLVCKEINT-------------------------------------------

Query:  -LLAKQGWRILTKSDSWVAIIYKAKYLRQKSFLEVEAGDSALWGWKSILAGRVVLRQGVRWSIGVNPEVDIWRDSWLPRPFTFRPMRCLDDEWQMAIE-F
         LLAKQGWR+     S VA + KAKY R  SFL+  AG +A W W+SILAGR VL  G+RW +G   ++  W D W+P    F P+R  D      +  F
Subjt:  -LLAKQGWRILTKSDSWVAIIYKAKYLRQKSFLEVEAGDSALWGWKSILAGRVVLRQGVRWSIGVNPEVDIWRDSWLPRPFTFRPMRCLDDEWQMAIE-F

Query:  IDGSGPKWNEKRLRKCLVGEDVEMTLAIPL
        ID +   W    +++    E   + L IPL
Subjt:  IDGSGPKWNEKRLRKCLVGEDVEMTLAIPL

A0A6J5UE59 Reverse transcriptase domain-containing protein3.8e-3337.44Show/hide
Query:  KLRRRLDDRLKGWAGRFLSQARKDVLVKVVALAIPVYTMNCFKLPMLVCKEIN--------------------------------------------TLL
        ++RR+LD +L GWA +FLS A K+VL+K VA+A+P YTM+CFKLP+ +CKEI                                              LL
Subjt:  KLRRRLDDRLKGWAGRFLSQARKDVLVKVVALAIPVYTMNCFKLPMLVCKEIN--------------------------------------------TLL

Query:  AKQGWRILTKSDSWVAIIYKAKYLRQKSFLEVEAGDSALWGWKSILAGRVVLRQGVRWSIGVNPEVDIWRDSWLPRPFTFRPMRCLDDEWQMAIEFIDGS
        AK GWRIL    S +A +   KY    SFL   +  S+ WGWK IL GR +L  G+RW IG    V +  D WLP P+TFR +    D   M  E ID  
Subjt:  AKQGWRILTKSDSWVAIIYKAKYLRQKSFLEVEAGDSALWGWKSILAGRVVLRQGVRWSIGVNPEVDIWRDSWLPRPFTFRPMRCLDDEWQMAIEFIDGS

Query:  GPKWNEKRLRKCLVGEDVEMTLAIPLS
           W +  + +C V E+    L+IP+S
Subjt:  GPKWNEKRLRKCLVGEDVEMTLAIPLS

A0A6J5WPU6 Reverse transcriptase domain-containing protein3.8e-3337.44Show/hide
Query:  KLRRRLDDRLKGWAGRFLSQARKDVLVKVVALAIPVYTMNCFKLPMLVCKEIN--------------------------------------------TLL
        ++ R+LDD+L GWA +FLS A K+VL+K VA+A+P YTM+ FKLP+ +CKEI                                             TLL
Subjt:  KLRRRLDDRLKGWAGRFLSQARKDVLVKVVALAIPVYTMNCFKLPMLVCKEIN--------------------------------------------TLL

Query:  AKQGWRILTKSDSWVAIIYKAKYLRQKSFLEVEAGDSALWGWKSILAGRVVLRQGVRWSIGVNPEVDIWRDSWLPRPFTFRPMRCLDDEWQMAIEFIDGS
        AK GWRIL    S +A +   KY    SFL   +  S+ WGWK IL GR +L  G+RW IG    V +  D WLP P+TFR +    D   M  E ID  
Subjt:  AKQGWRILTKSDSWVAIIYKAKYLRQKSFLEVEAGDSALWGWKSILAGRVVLRQGVRWSIGVNPEVDIWRDSWLPRPFTFRPMRCLDDEWQMAIEFIDGS

Query:  GPKWNEKRLRKCLVGEDVEMTLAIPLS
           W +  + +C V E+    L+IP+S
Subjt:  GPKWNEKRLRKCLVGEDVEMTLAIPLS

M5XSK0 Reverse transcriptase domain-containing protein1.7e-2834.65Show/hide
Query:  LRRRLDDRLKGWAGRFLSQARKDVLVKVVALAIPVYTMNCFKLPMLVCKEIN--------------------------------------------TLLA
        L+ RL  +L+ W G+ LS A K++L+KVVA AIP+YTM+CF LP  VC+++N                                             LLA
Subjt:  LRRRLDDRLKGWAGRFLSQARKDVLVKVVALAIPVYTMNCFKLPMLVCKEIN--------------------------------------------TLLA

Query:  KQGWRILTKSDSWVAIIYKAKYLRQKSFLEVEAGDSALWGWKSILAGRVVLRQGVRWSIGVNPEVDIWRDSWLPRPFTFR--PMRCLDDEWQMAIEFIDG
        KQGWR+L   DS V  + KAKY   +SFLE      A   WKS+   R V+ QG RW +G    + IW D WLP+P +F+    R          + I G
Subjt:  KQGWRILTKSDSWVAIIYKAKYLRQKSFLEVEAGDSALWGWKSILAGRVVLRQGVRWSIGVNPEVDIWRDSWLPRPFTFR--PMRCLDDEWQMAIEFIDG

Query:  SGPKWNEKRLRKCLVGEDVEMTLAIPLS
           +WN   L+     E+V +  +IPLS
Subjt:  SGPKWNEKRLRKCLVGEDVEMTLAIPLS

SwissProt top hitse value%identityAlignment
P93295 Uncharacterized mitochondrial protein AtMg003101.8e-0823.61Show/hide
Query:  LAIPVYTMNCFKLPMLVCKEINT---------------------------------------------LLAKQGWRILTKSDSWVAIIYKAKYLRQKSFL
        +A+PVY M+CF+L  L+CK++ +                                             LLAKQ +RI+ +  + ++ + +++Y    S +
Subjt:  LAIPVYTMNCFKLPMLVCKEINT---------------------------------------------LLAKQGWRILTKSDSWVAIIYKAKYLRQKSFL

Query:  EVEAGDSALWGWKSILAGRVVLRQGVRWSIGVNPEVDIWRDSWL
        E   G    + W+SI+ GR +L +G+  +IG      +W D W+
Subjt:  EVEAGDSALWGWKSILAGRVVLRQGVRWSIGVNPEVDIWRDSWL

Arabidopsis top hitse value%identityAlignment
AT4G29090.1 Ribonuclease H-like superfamily protein7.9e-1527.72Show/hide
Query:  LAIPVYTMNCFKLPMLVCKEINTLLA--------------------------------------------KQGWRILTKSDSWVAIIYKAKYLRQKSFLE
        +A+P YTM CF LP  VCK+I ++LA                                            KQ WR+L++ +S +A ++K++Y  +   L 
Subjt:  LAIPVYTMNCFKLPMLVCKEINTLLA--------------------------------------------KQGWRILTKSDSWVAIIYKAKYLRQKSFLE

Query:  VEAGDSALWGWKSILAGRVVLRQGVRWSIGVNPEVDIWRDSWL---PRPFTFRPMRCLDDEWQ------MAIEFIDGSGPKWNE
           G    + WKSI A + +LRQG R  +G   ++ IWR  WL   P     R  R    E+          + ID SG +W +
Subjt:  VEAGDSALWGWKSILAGRVVLRQGVRWSIGVNPEVDIWRDSWL---PRPFTFRPMRCLDDEWQ------MAIEFIDGSGPKWNE

ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein1.3e-0923.61Show/hide
Query:  LAIPVYTMNCFKLPMLVCKEINT---------------------------------------------LLAKQGWRILTKSDSWVAIIYKAKYLRQKSFL
        +A+PVY M+CF+L  L+CK++ +                                             LLAKQ +RI+ +  + ++ + +++Y    S +
Subjt:  LAIPVYTMNCFKLPMLVCKEINT---------------------------------------------LLAKQGWRILTKSDSWVAIIYKAKYLRQKSFL

Query:  EVEAGDSALWGWKSILAGRVVLRQGVRWSIGVNPEVDIWRDSWL
        E   G    + W+SI+ GR +L +G+  +IG      +W D W+
Subjt:  EVEAGDSALWGWKSILAGRVVLRQGVRWSIGVNPEVDIWRDSWL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCGGAAAGCTGAGAAGAAGGCTGGATGATAGATTGAAGGGATGGGCTGGGCGATTCCTATCGCAAGCAAGAAAGGATGTGTTGGTAAAGGTTGTGGCTCTTGCTAT
TCCAGTGTATACCATGAATTGTTTTAAGCTACCAATGTTAGTTTGCAAGGAGATCAATACTCTTCTAGCAAAGCAAGGATGGAGGATTCTTACAAAGTCGGACAGTTGGG
TGGCAATAATATATAAGGCGAAGTACTTGCGGCAAAAGTCATTTCTAGAGGTGGAAGCTGGGGATTCGGCTTTGTGGGGTTGGAAGAGTATTTTGGCTGGCAGGGTTGTC
TTGAGGCAAGGGGTCCGATGGAGCATTGGGGTAAACCCTGAGGTAGACATTTGGCGTGATTCTTGGCTTCCACGACCGTTCACCTTCAGGCCGATGAGGTGCCTAGACGA
TGAATGGCAGATGGCTATTGAATTCATAGATGGTAGTGGCCCAAAATGGAATGAGAAGCGTCTAAGGAAATGTCTTGTGGGTGAGGATGTGGAGATGACGTTGGCAATCC
CTTTAAGTAGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTCGGAAAGCTGAGAAGAAGGCTGGATGATAGATTGAAGGGATGGGCTGGGCGATTCCTATCGCAAGCAAGAAAGGATGTGTTGGTAAAGGTTGTGGCTCTTGCTAT
TCCAGTGTATACCATGAATTGTTTTAAGCTACCAATGTTAGTTTGCAAGGAGATCAATACTCTTCTAGCAAAGCAAGGATGGAGGATTCTTACAAAGTCGGACAGTTGGG
TGGCAATAATATATAAGGCGAAGTACTTGCGGCAAAAGTCATTTCTAGAGGTGGAAGCTGGGGATTCGGCTTTGTGGGGTTGGAAGAGTATTTTGGCTGGCAGGGTTGTC
TTGAGGCAAGGGGTCCGATGGAGCATTGGGGTAAACCCTGAGGTAGACATTTGGCGTGATTCTTGGCTTCCACGACCGTTCACCTTCAGGCCGATGAGGTGCCTAGACGA
TGAATGGCAGATGGCTATTGAATTCATAGATGGTAGTGGCCCAAAATGGAATGAGAAGCGTCTAAGGAAATGTCTTGTGGGTGAGGATGTGGAGATGACGTTGGCAATCC
CTTTAAGTAGTTAG
Protein sequenceShow/hide protein sequence
MVGKLRRRLDDRLKGWAGRFLSQARKDVLVKVVALAIPVYTMNCFKLPMLVCKEINTLLAKQGWRILTKSDSWVAIIYKAKYLRQKSFLEVEAGDSALWGWKSILAGRVV
LRQGVRWSIGVNPEVDIWRDSWLPRPFTFRPMRCLDDEWQMAIEFIDGSGPKWNEKRLRKCLVGEDVEMTLAIPLSS