; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0008532 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0008532
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationchr9:24597170..24600670
RNA-Seq ExpressionLag0008532
SyntenyLag0008532
Gene Ontology termsNA
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047477.1 uncharacterized protein E6C27_scaffold498G00940 [Cucumis melo var. makuwa]8.1e-12266.97Show/hide
Query:  PDSDVVTVMMTETRTMEERMTEMQEHINNLMKAIEEKDSQIEQLKSQIENQHIAESSQTQVVKNHDKGKSIVQDDHPQCSVSVASLSIQQLQDMITNCIR
        P  ++++VM+T+  T E+RM E+++ +N LMKA+EE+D +I  LK+ IE++  AESS T  +KN +KGK+I+Q+  PQ S S+ASLS+QQLQ+MI N I+
Subjt:  PDSDVVTVMMTETRTMEERMTEMQEHINNLMKAIEEKDSQIEQLKSQIENQHIAESSQTQVVKNHDKGKSIVQDDHPQCSVSVASLSIQQLQDMITNCIR

Query:  AQYGGPTQDSLLYSKPYTKRIDNFRTSIGYQPTKFQQFDGKGNPKQHIAHFVEICENAGTRGDLLVKQFIRTLKGNAFDWYTDLEPESVDNWEELEREFL
         QYGGP Q   LYSKPYTKRIDN R   GYQP KFQQFDGKGNPKQH+AHF+E CE AGTRGDLLVKQF+RTLKGNAFDWYTDLEPES+D+WE+LER+FL
Subjt:  AQYGGPTQDSLLYSKPYTKRIDNFRTSIGYQPTKFQQFDGKGNPKQHIAHFVEICENAGTRGDLLVKQFIRTLKGNAFDWYTDLEPESVDNWEELEREFL

Query:  NRFYNTRRTISMFELTNTKQRKGELVVNYINRWRAMSLDCKDRVTEFFSVEMCIQGMHWELLYILKGIKPRTFEELATRAHDMELSIASRENQDLLLPNM
        NRFY+TRR +SM ELT TKQRKGE V++YINRWRA+SLDCKDR+TE  +VEMC QGMHW LLYIL+GIKPRTFEELATRAHDMELSIA+R N DLL+P +
Subjt:  NRFYNTRRTISMFELTNTKQRKGELVVNYINRWRAMSLDCKDRVTEFFSVEMCIQGMHWELLYILKGIKPRTFEELATRAHDMELSIASRENQDLLLPNM

Query:  RKEGRNDEET-------IEESMVVNTT
        RKE +  + T        +E+MVV+TT
Subjt:  RKEGRNDEET-------IEESMVVNTT

XP_031735972.1 uncharacterized protein LOC116401693 [Cucumis sativus]6.2e-12257.93Show/hide
Query:  SFKTSSMVAVEIKSYMGSTAHCCFNELRLQEDKASIIASEETTLQGAYTNDK--FLVKYNPLF------------EPDSDVVTVMMTETRTMEERMTEMQ
        S K +S  +    +Y G         +   +D+ S IA  ++ L+    + K   ++K NPL+            E   DV++VMM +   +E  M EM+
Subjt:  SFKTSSMVAVEIKSYMGSTAHCCFNELRLQEDKASIIASEETTLQGAYTNDK--FLVKYNPLF------------EPDSDVVTVMMTETRTMEERMTEMQ

Query:  EHINNLMKAIEEKDSQIEQLKSQIENQHIAESSQTQVVKNHDKGKSIVQDDHP-QCSVSVASLSIQQLQDMITNCIRAQYGGPTQDSLLYSKPYTKRIDN
          IN LMK ++E+D +I  LK Q++ +  AESSQT VVK  DKGK++VQ++ P Q S SVASLS+QQLQDMITN IRAQYGGP+Q S +YSKPYTKRIDN
Subjt:  EHINNLMKAIEEKDSQIEQLKSQIENQHIAESSQTQVVKNHDKGKSIVQDDHP-QCSVSVASLSIQQLQDMITNCIRAQYGGPTQDSLLYSKPYTKRIDN

Query:  FRTSIGYQPTKFQQFDGKGNPKQHIAHFVEICENAGTRGDLLVKQFIRTLKGNAFDWYTDLEPESVDNWEELEREFLNRFYNTRRTISMFELTNTKQRKG
         R  +GYQP KFQQFDGKGNPKQH+AHFVE CENAG+RGD LV+QF+R+LKGNAF+WYTDLEPES+++WE+LE+EFLNRFY+TRRT+SM ELTNTKQRKG
Subjt:  FRTSIGYQPTKFQQFDGKGNPKQHIAHFVEICENAGTRGDLLVKQFIRTLKGNAFDWYTDLEPESVDNWEELEREFLNRFYNTRRTISMFELTNTKQRKG

Query:  ELVVNYINRWRAMSLDCKDRVTEFFSVEMCIQGMHWELLYILKGIKPRTFEELATRAHDMELSIASRENQDLLLPNMRKEGRN-------DEETIEESMV
        E V++YINRWRA+SLDCKDR+TE  +VEMC QGMHW LLYIL+GIKPRTFEELATRAHDMELSIASR  +D L+P ++K+ +         + T +ESMV
Subjt:  ELVVNYINRWRAMSLDCKDRVTEFFSVEMCIQGMHWELLYILKGIKPRTFEELATRAHDMELSIASRENQDLLLPNMRKEGRN-------DEETIEESMV

Query:  VNTTLHKSSASLKANL
        VNTT  K S   +A +
Subjt:  VNTTLHKSSASLKANL

XP_031739134.1 uncharacterized protein LOC116402863 [Cucumis sativus]1.8e-12157.69Show/hide
Query:  SFKTSSMVAVEIKSYMGSTAHCCFNELRLQEDKASIIASEETTLQGAYTNDK--FLVKYNPLF------------EPDSDVVTVMMTETRTMEERMTEMQ
        S K +S  +    +Y G         +   +D+ S IA  ++ L+    + K   ++K NPL+            E   DV++VMM +   +E  M EM+
Subjt:  SFKTSSMVAVEIKSYMGSTAHCCFNELRLQEDKASIIASEETTLQGAYTNDK--FLVKYNPLF------------EPDSDVVTVMMTETRTMEERMTEMQ

Query:  EHINNLMKAIEEKDSQIEQLKSQIENQHIAESSQTQVVKNHDKGKSIVQDDHP-QCSVSVASLSIQQLQDMITNCIRAQYGGPTQDSLLYSKPYTKRIDN
          IN LMK ++E+D +I  LK Q++ +  AESSQT VVK  DKGK++VQ++ P Q S SVASLS+QQLQDMIT+ IRAQYGGP+Q S +YSKPYTKRIDN
Subjt:  EHINNLMKAIEEKDSQIEQLKSQIENQHIAESSQTQVVKNHDKGKSIVQDDHP-QCSVSVASLSIQQLQDMITNCIRAQYGGPTQDSLLYSKPYTKRIDN

Query:  FRTSIGYQPTKFQQFDGKGNPKQHIAHFVEICENAGTRGDLLVKQFIRTLKGNAFDWYTDLEPESVDNWEELEREFLNRFYNTRRTISMFELTNTKQRKG
         R  +GYQP KFQQFDGKGNPKQH+AHFVE CENAG+RGD LV+QF+R+LKGNAF+WYTDLEPES+++WE+LE+EFLNRFY+TRRT+SM ELTNTKQRKG
Subjt:  FRTSIGYQPTKFQQFDGKGNPKQHIAHFVEICENAGTRGDLLVKQFIRTLKGNAFDWYTDLEPESVDNWEELEREFLNRFYNTRRTISMFELTNTKQRKG

Query:  ELVVNYINRWRAMSLDCKDRVTEFFSVEMCIQGMHWELLYILKGIKPRTFEELATRAHDMELSIASRENQDLLLPNMRKEGRN-------DEETIEESMV
        E V++YINRWRA+SLDCKDR+TE  +VEMC QGMHW LLYIL+GIKPRTFEELATRAHDMELSIASR  +D L+P ++K+ +         + T +ESMV
Subjt:  ELVVNYINRWRAMSLDCKDRVTEFFSVEMCIQGMHWELLYILKGIKPRTFEELATRAHDMELSIASRENQDLLLPNMRKEGRN-------DEETIEESMV

Query:  VNTTLHKSSASLKANL
        VNTT  K S   +A +
Subjt:  VNTTLHKSSASLKANL

XP_031742032.1 uncharacterized protein LOC116404025 [Cucumis sativus]8.1e-12257.69Show/hide
Query:  SFKTSSMVAVEIKSYMGSTAHCCFNELRLQEDKASIIASEETTLQGAYTNDK--FLVKYNPLF------------EPDSDVVTVMMTETRTMEERMTEMQ
        S K +S  +    +Y G         +   +D+ S IA  ++ L+    + K   ++K NPL+            E   DV++VMM +   +E  M EM+
Subjt:  SFKTSSMVAVEIKSYMGSTAHCCFNELRLQEDKASIIASEETTLQGAYTNDK--FLVKYNPLF------------EPDSDVVTVMMTETRTMEERMTEMQ

Query:  EHINNLMKAIEEKDSQIEQLKSQIENQHIAESSQTQVVKNHDKGKSIVQDDHP-QCSVSVASLSIQQLQDMITNCIRAQYGGPTQDSLLYSKPYTKRIDN
          IN LMK ++E+D +I  LK Q++ +  AESSQT VVK  DKGK++VQ++ P Q S SVASLS+QQLQDMIT+ IRAQYGGP+Q S +YSKPYTKRIDN
Subjt:  EHINNLMKAIEEKDSQIEQLKSQIENQHIAESSQTQVVKNHDKGKSIVQDDHP-QCSVSVASLSIQQLQDMITNCIRAQYGGPTQDSLLYSKPYTKRIDN

Query:  FRTSIGYQPTKFQQFDGKGNPKQHIAHFVEICENAGTRGDLLVKQFIRTLKGNAFDWYTDLEPESVDNWEELEREFLNRFYNTRRTISMFELTNTKQRKG
         R  +GYQP KFQQFDGKGNPKQH+AHFVE CENAG+RGD LV+QF+R+LKGNAF+WYTDLEPES+++WE+LE+EFLNRFY+TRRT+SM ELTNTKQRKG
Subjt:  FRTSIGYQPTKFQQFDGKGNPKQHIAHFVEICENAGTRGDLLVKQFIRTLKGNAFDWYTDLEPESVDNWEELEREFLNRFYNTRRTISMFELTNTKQRKG

Query:  ELVVNYINRWRAMSLDCKDRVTEFFSVEMCIQGMHWELLYILKGIKPRTFEELATRAHDMELSIASRENQDLLLPNMRKEGRN-------DEETIEESMV
        E V++YINRWRA+SLDCKDR+TE  +VEMC QGMHW LLYIL+GIKPRTFEELATRAHDMELSIASR  +D L+P ++K+ +         + T++ESMV
Subjt:  ELVVNYINRWRAMSLDCKDRVTEFFSVEMCIQGMHWELLYILKGIKPRTFEELATRAHDMELSIASRENQDLLLPNMRKEGRN-------DEETIEESMV

Query:  VNTTLHKSSASLKANL
        VNTT  K S   +A +
Subjt:  VNTTLHKSSASLKANL

XP_031742199.1 uncharacterized protein LOC105435721 [Cucumis sativus]6.2e-12257.93Show/hide
Query:  SFKTSSMVAVEIKSYMGSTAHCCFNELRLQEDKASIIASEETTLQGAYTNDK--FLVKYNPLF------------EPDSDVVTVMMTETRTMEERMTEMQ
        S K +S  +    +Y G         +   +D+ S IA  ++ L+    + K   ++K NPL+            E   DV++VMM +   +E  M EM+
Subjt:  SFKTSSMVAVEIKSYMGSTAHCCFNELRLQEDKASIIASEETTLQGAYTNDK--FLVKYNPLF------------EPDSDVVTVMMTETRTMEERMTEMQ

Query:  EHINNLMKAIEEKDSQIEQLKSQIENQHIAESSQTQVVKNHDKGKSIVQDDHP-QCSVSVASLSIQQLQDMITNCIRAQYGGPTQDSLLYSKPYTKRIDN
          IN LMK ++E+D +I  LK Q++ +  AESSQT VVK  DKGK++VQ++ P Q S SVASLS+QQLQDMITN IRAQYGGP+Q S +YSKPYTKRIDN
Subjt:  EHINNLMKAIEEKDSQIEQLKSQIENQHIAESSQTQVVKNHDKGKSIVQDDHP-QCSVSVASLSIQQLQDMITNCIRAQYGGPTQDSLLYSKPYTKRIDN

Query:  FRTSIGYQPTKFQQFDGKGNPKQHIAHFVEICENAGTRGDLLVKQFIRTLKGNAFDWYTDLEPESVDNWEELEREFLNRFYNTRRTISMFELTNTKQRKG
         R  +GYQP KFQQFDGKGNPKQH+AHFVE CENAG+RGD LV+QF+R+LKGNAF+WYTDLEPES+++WE+LE+EFLNRFY+TRRT+SM ELTNTKQRKG
Subjt:  FRTSIGYQPTKFQQFDGKGNPKQHIAHFVEICENAGTRGDLLVKQFIRTLKGNAFDWYTDLEPESVDNWEELEREFLNRFYNTRRTISMFELTNTKQRKG

Query:  ELVVNYINRWRAMSLDCKDRVTEFFSVEMCIQGMHWELLYILKGIKPRTFEELATRAHDMELSIASRENQDLLLPNMRKEGRN-------DEETIEESMV
        E V++YINRWRA+SLDCKDR+TE  +VEMC QGMHW LLYIL+GIKPRTFEELATRAHDMELSIASR  +D L+P ++K+ +         + T +ESMV
Subjt:  ELVVNYINRWRAMSLDCKDRVTEFFSVEMCIQGMHWELLYILKGIKPRTFEELATRAHDMELSIASRENQDLLLPNMRKEGRN-------DEETIEESMV

Query:  VNTTLHKSSASLKANL
        VNTT  K S   +A +
Subjt:  VNTTLHKSSASLKANL

TrEMBL top hitse value%identityAlignment
A0A5A7TST6 Ty3-gypsy retrotransposon protein1.3e-12054.94Show/hide
Query:  KASIIASEETTLQGAYTNDKFLVKYNPLFE--PDSDVVTVMMTETRTMEERMTEMQEHINNLMKAIEEKDSQIEQLKSQIENQHIAESSQTQVVKNHDKG
        K  I+  E   +   Y++ K      P  E  P S++++VM+T   T E RM E+++ +N LMK +EE+D +I  LK+ IE++  AESS    VKN DKG
Subjt:  KASIIASEETTLQGAYTNDKFLVKYNPLFE--PDSDVVTVMMTETRTMEERMTEMQEHINNLMKAIEEKDSQIEQLKSQIENQHIAESSQTQVVKNHDKG

Query:  KSIVQDDHPQCSVSVASLSIQQLQDMITNCIRAQYGGPTQDSLLYSKPYTKRIDNFRTSIGYQPTKFQQFDGKGNPKQHIAHFVEICENAGTRGDLLVKQ
        K+++Q+  PQ S S+ASLS+QQLQ+MI + I+ QYGGP Q   LYSKPYTKRIDN R S GYQP KFQQFDGKGNPKQH+AHF+E CE AGTRGDLLVKQ
Subjt:  KSIVQDDHPQCSVSVASLSIQQLQDMITNCIRAQYGGPTQDSLLYSKPYTKRIDNFRTSIGYQPTKFQQFDGKGNPKQHIAHFVEICENAGTRGDLLVKQ

Query:  FIRTLKGNAFDWYTDLEPESVDNWEELEREFLNRFYNTRRTISMFELTNTKQRKGELVVNYINRWRAMSLDCKDRVTEFFSVEMCIQGMHWELLYILKGI
        F+RTLKGNAFDWY DLEPES+DNWE+LER+FLNRFY+TRR +SM ELTNT+Q+KGELV++YINRWRA+SLDCKDR+TE  +VEMC QGMHW LLYIL+GI
Subjt:  FIRTLKGNAFDWYTDLEPESVDNWEELEREFLNRFYNTRRTISMFELTNTKQRKGELVVNYINRWRAMSLDCKDRVTEFFSVEMCIQGMHWELLYILKGI

Query:  KPRTFEELATRAHDMELSIASRENQDLLLPNMRKEGRNDEET-------IEESMVVNTTLHKSSASLKANLVTTPADHQANRPIQQIIKSAGRSSKRINK
        KPRTFEELATRAHDMELSI +RE +D L+P  R +    ++T       I+ESMVV+ T  KS +  K   +     H  N   Q  +K      +R  K
Subjt:  KPRTFEELATRAHDMELSIASRENQDLLLPNMRKEGRNDEET-------IEESMVVNTTLHKSSASLKANLVTTPADHQANRPIQQIIKSAGRSSKRINK

Query:  LTSRFDRSSSQSTDQ--EDQQVSRPIIQEDQQANR
        +    D   +   +Q  E+Q +  P  +  +QA +
Subjt:  LTSRFDRSSSQSTDQ--EDQQVSRPIIQEDQQANR

A0A5A7TZU9 Ribonuclease H3.9e-12266.97Show/hide
Query:  PDSDVVTVMMTETRTMEERMTEMQEHINNLMKAIEEKDSQIEQLKSQIENQHIAESSQTQVVKNHDKGKSIVQDDHPQCSVSVASLSIQQLQDMITNCIR
        P  ++++VM+T+  T E+RM E+++ +N LMKA+EE+D +I  LK+ IE++  AESS T  +KN +KGK+I+Q+  PQ S S+ASLS+QQLQ+MI N I+
Subjt:  PDSDVVTVMMTETRTMEERMTEMQEHINNLMKAIEEKDSQIEQLKSQIENQHIAESSQTQVVKNHDKGKSIVQDDHPQCSVSVASLSIQQLQDMITNCIR

Query:  AQYGGPTQDSLLYSKPYTKRIDNFRTSIGYQPTKFQQFDGKGNPKQHIAHFVEICENAGTRGDLLVKQFIRTLKGNAFDWYTDLEPESVDNWEELEREFL
         QYGGP Q   LYSKPYTKRIDN R   GYQP KFQQFDGKGNPKQH+AHF+E CE AGTRGDLLVKQF+RTLKGNAFDWYTDLEPES+D+WE+LER+FL
Subjt:  AQYGGPTQDSLLYSKPYTKRIDNFRTSIGYQPTKFQQFDGKGNPKQHIAHFVEICENAGTRGDLLVKQFIRTLKGNAFDWYTDLEPESVDNWEELEREFL

Query:  NRFYNTRRTISMFELTNTKQRKGELVVNYINRWRAMSLDCKDRVTEFFSVEMCIQGMHWELLYILKGIKPRTFEELATRAHDMELSIASRENQDLLLPNM
        NRFY+TRR +SM ELT TKQRKGE V++YINRWRA+SLDCKDR+TE  +VEMC QGMHW LLYIL+GIKPRTFEELATRAHDMELSIA+R N DLL+P +
Subjt:  NRFYNTRRTISMFELTNTKQRKGELVVNYINRWRAMSLDCKDRVTEFFSVEMCIQGMHWELLYILKGIKPRTFEELATRAHDMELSIASRENQDLLLPNM

Query:  RKEGRNDEET-------IEESMVVNTT
        RKE +  + T        +E+MVV+TT
Subjt:  RKEGRNDEET-------IEESMVVNTT

A0A5A7UXF0 Ty3-gypsy retrotransposon protein5.3e-11954.71Show/hide
Query:  KASIIASEETTLQGAYTNDKFLVKYNPLFEPDS--DVVTVMMTETRTMEERMTEMQEHINNLMKAIEEKDSQIEQLKSQIENQHIAESSQTQVVKNHDKG
        K  I+  E   +   Y++ K      P  E  S  ++++VM+T   T E RM E+++ +N LMK +EE+D +I  LK+ IE++  AESS   +VKN DKG
Subjt:  KASIIASEETTLQGAYTNDKFLVKYNPLFEPDS--DVVTVMMTETRTMEERMTEMQEHINNLMKAIEEKDSQIEQLKSQIENQHIAESSQTQVVKNHDKG

Query:  KSIVQDDHPQCSVSVASLSIQQLQDMITNCIRAQYGGPTQDSLLYSKPYTKRIDNFRTSIGYQPTKFQQFDGKGNPKQHIAHFVEICENAGTRGDLLVKQ
        K+++Q+  PQ S S+ASLS+QQLQ+MI + I+ QYGGP Q   LYSKPYTKRIDN R   GYQP KFQQFDGKGNPKQH+AHF+E CE AGTRGDLLVKQ
Subjt:  KSIVQDDHPQCSVSVASLSIQQLQDMITNCIRAQYGGPTQDSLLYSKPYTKRIDNFRTSIGYQPTKFQQFDGKGNPKQHIAHFVEICENAGTRGDLLVKQ

Query:  FIRTLKGNAFDWYTDLEPESVDNWEELEREFLNRFYNTRRTISMFELTNTKQRKGELVVNYINRWRAMSLDCKDRVTEFFSVEMCIQGMHWELLYILKGI
        F+RTLKGNAFDWY DLEPES+DNWE+LER+FLNRFY+TRR +SM ELTNT+Q+KGELV+NYINRWRA+SLDCKDR+TE  +VEMC QGMHW LLYIL+GI
Subjt:  FIRTLKGNAFDWYTDLEPESVDNWEELEREFLNRFYNTRRTISMFELTNTKQRKGELVVNYINRWRAMSLDCKDRVTEFFSVEMCIQGMHWELLYILKGI

Query:  KPRTFEELATRAHDMELSIASRENQDLLLPNMRKEGRNDEET-------IEESMVVNTTLHKSSASLKANLVTTPADHQANRPIQQIIKSAGRSSKRINK
        KPRTFEELATRAHDMELSIA+R  +D L+P  R +    ++T       I+ESMVV+ T  KS +  K   +    D    R  Q  +K      +R  K
Subjt:  KPRTFEELATRAHDMELSIASRENQDLLLPNMRKEGRNDEET-------IEESMVVNTTLHKSSASLKANLVTTPADHQANRPIQQIIKSAGRSSKRINK

Query:  LTSRFDRSSSQSTDQ--EDQQVSRPIIQEDQQANR
        +    D   +   +Q  E+Q +  P  +  +QA +
Subjt:  LTSRFDRSSSQSTDQ--EDQQVSRPIIQEDQQANR

A0A5A7V3R7 Ty3-gypsy retrotransposon protein2.0e-11858.38Show/hide
Query:  KASIIASEETTLQGAYTNDKFLVKYNPLFE--PDSDVVTVMMTETRTMEERMTEMQEHINNLMKAIEEKDSQIEQLKSQIENQHIAESSQTQVVKNHDKG
        K  I+  E   +   Y++ K      P  E  P  ++++VM+T   T E RM E++E +N LMK +EE+D +I  LK+ IE++  AESS    VKN DKG
Subjt:  KASIIASEETTLQGAYTNDKFLVKYNPLFE--PDSDVVTVMMTETRTMEERMTEMQEHINNLMKAIEEKDSQIEQLKSQIENQHIAESSQTQVVKNHDKG

Query:  KSIVQDDHPQCSVSVASLSIQQLQDMITNCIRAQYGGPTQDSLLYSKPYTKRIDNFRTSIGYQPTKFQQFDGKGNPKQHIAHFVEICENAGTRGDLLVKQ
        K+++Q+  PQ S S+ASLS+QQLQ+MI N I+ QYGGP Q   LYSKPYTKRI N R   GYQP KFQQFDGKGNPKQH+AHF+E CE AGTRGDLLVKQ
Subjt:  KSIVQDDHPQCSVSVASLSIQQLQDMITNCIRAQYGGPTQDSLLYSKPYTKRIDNFRTSIGYQPTKFQQFDGKGNPKQHIAHFVEICENAGTRGDLLVKQ

Query:  FIRTLKGNAFDWYTDLEPESVDNWEELEREFLNRFYNTRRTISMFELTNTKQRKGELVVNYINRWRAMSLDCKDRVTEFFSVEMCIQGMHWELLYILKGI
        F++TLKGNAFDWY DLEPES+DNWE+LER+FLNRFY+TRR +SM ELTNT+Q+KGELV++YINRWRA+SLDCKDR+TE  +VEMC QGMHW LLYIL+G 
Subjt:  FIRTLKGNAFDWYTDLEPESVDNWEELEREFLNRFYNTRRTISMFELTNTKQRKGELVVNYINRWRAMSLDCKDRVTEFFSVEMCIQGMHWELLYILKGI

Query:  KPRTFEELATRAHDMELSIASRENQDLLLPNMRKEGRNDEET-------IEESMVVNTTLHKSSASLKANLVTTPADHQANR
        KPRTFEELATRAHDMELSIA+R  +D L+P  R +    ++T       I+E MV + T  KS +  K   +    D    R
Subjt:  KPRTFEELATRAHDMELSIASRENQDLLLPNMRKEGRNDEET-------IEESMVVNTTLHKSSASLKANLVTTPADHQANR

A0A5D3D4X3 Ty3-gypsy retrotransposon protein3.4e-11856.01Show/hide
Query:  KYNPLFE------PDSDVVTVMMTETRTMEERMTEMQEHINNLMKAIEEKDSQIEQLKSQIENQHIAESSQTQVVKNHDKGKSIVQDDHPQCSVSVASLS
        K+N L E      P  ++++VM+T+    E+RM E+++ +N LMK +EE+D +I  LK+ IE++  AESS    VKN DKGK+++Q+  PQ S S+ASLS
Subjt:  KYNPLFE------PDSDVVTVMMTETRTMEERMTEMQEHINNLMKAIEEKDSQIEQLKSQIENQHIAESSQTQVVKNHDKGKSIVQDDHPQCSVSVASLS

Query:  IQQLQDMITNCIRAQYGGPTQDSLLYSKPYTKRIDNFRTSIGYQPTKFQQFDGKGNPKQHIAHFVEICENAGTRGDLLVKQFIRTLKGNAFDWYTDLEPE
        +QQLQ+MI + I+ QYGGP Q   LYSKPYTKRIDN R   GYQP KFQQFDGKGNPKQH+AHF+E CE AGTRGDLLVKQF+RTLKGNAFDWY DLEPE
Subjt:  IQQLQDMITNCIRAQYGGPTQDSLLYSKPYTKRIDNFRTSIGYQPTKFQQFDGKGNPKQHIAHFVEICENAGTRGDLLVKQFIRTLKGNAFDWYTDLEPE

Query:  SVDNWEELEREFLNRFYNTRRTISMFELTNTKQRKGELVVNYINRWRAMSLDCKDRVTEFFSVEMCIQGMHWELLYILKGIKPRTFEELATRAHDMELSI
        S+DNWE+LER+FLNRFY+TRR +SM ELTNT+Q+KGELV++YINRWRA+SLDCKDR+TE  +VEMC QGMHW LLYIL+GIKPRTFEELATRAHDMELSI
Subjt:  SVDNWEELEREFLNRFYNTRRTISMFELTNTKQRKGELVVNYINRWRAMSLDCKDRVTEFFSVEMCIQGMHWELLYILKGIKPRTFEELATRAHDMELSI

Query:  ASRENQDLLLPNMRKEGRNDEET-------IEESMVVNTTLHKSSASLKANLVTTPADHQANRPIQQIIKSAGRSSKRINKLTSRFDRSSSQSTDQ--ED
        A+R  +D L+P  R +    ++T       I+ESMVV+ T  KS +  K   +    D    R  Q  +K      +R  K+    D   +   +Q  E+
Subjt:  ASRENQDLLLPNMRKEGRNDEET-------IEESMVVNTTLHKSSASLKANLVTTPADHQANRPIQQIIKSAGRSSKRINKLTSRFDRSSSQSTDQ--ED

Query:  QQVSRPIIQEDQQANR
        Q +  P  +  +QA +
Subjt:  QQVSRPIIQEDQQANR

SwissProt top hitse value%identityAlignment
Q9Z1Q1 Nestin (Fragments)1.5e-0625Show/hide
Query:  DHQANRPIQ----QIIKSAGRSSKRINKLTSRFDRSSSQSTDQEDQQVSRPIIQEDQQANRPIIQEDQQISRPIIKPIIREDQEVSRPIIQEDQQANRPI
        D + +RP++    + +K      +    L  +  + S  S ++EDQ+  RP+ +E+ Q    +++++ Q S   +     EDQE  RP+ +E+ +  +P+
Subjt:  DHQANRPIQ----QIIKSAGRSSKRINKLTSRFDRSSSQSTDQEDQQVSRPIIQEDQQANRPIIQEDQQISRPIIKPIIREDQEVSRPIIQEDQQANRPI

Query:  IQEDQQVNRPIIQEGQQA-----------NRPIIKKINKSAGRSSKRINKLTSRSDRSSSQSTDQEDQQVSRPIIQKDQQANRLII------------QE
         +EDQ     I +EGQ++           +RP+ K+         + + +L  +  + S  S ++EDQ+  RP+ +++ Q    +I            +E
Subjt:  IQEDQQVNRPIIQEGQQA-----------NRPIIKKINKSAGRSSKRINKLTSRSDRSSSQSTDQEDQQVSRPIIQKDQQANRLII------------QE

Query:  DQQVSKPIIKPIIREDQQVSRPIIQEDQQANRPIIQEDQQ
        DQ+  +P+ K    EDQ+V R I +E Q++     +EDQ+
Subjt:  DQQVSKPIIKPIIREDQQVSRPIIQEDQQANRPIIQEDQQ

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCATTCAAGACTTCTTCGATGGTCGCTGTCGAGATCAAGTCTTACATGGGTTCAACTGCCCATTGTTGTTTCAATGAACTGAGGTTGCAAGAAGATAAAGCTTCTAT
CATTGCAAGCGAAGAAACAACCTTGCAGGGGGCATATACCAATGACAAGTTTCTTGTTAAGTATAACCCACTGTTTGAACCTGATTCTGACGTAGTGACTGTCATGATGA
CTGAGACAAGAACTATGGAAGAAAGAATGACTGAGATGCAAGAACACATCAACAACTTGATGAAGGCGATTGAAGAAAAAGATTCTCAAATTGAGCAACTAAAGAGCCAA
ATTGAGAACCAACATATCGCCGAATCAAGTCAAACCCAAGTCGTAAAAAATCACGACAAAGGAAAGTCTATAGTGCAAGATGATCATCCACAATGCTCTGTTTCGGTCGC
TTCACTATCCATCCAACAGCTCCAAGATATGATCACAAACTGTATCAGAGCTCAGTACGGTGGACCTACTCAAGATTCCCTCTTGTACTCCAAACCTTATACTAAGAGGA
TTGATAATTTTAGAACGTCAATCGGGTATCAGCCAACGAAATTTCAACAATTTGATGGAAAGGGCAATCCTAAACAACATATTGCCCACTTCGTTGAGATATGCGAGAAC
GCTGGTACTCGAGGGGACCTACTAGTCAAGCAGTTCATTCGAACACTTAAAGGAAATGCGTTTGACTGGTACACTGATCTAGAACCTGAGTCAGTAGACAATTGGGAGGA
ACTCGAAAGAGAGTTTTTGAATCGCTTCTACAACACTAGAAGAACCATTAGCATGTTCGAGCTCACCAACACTAAACAACGAAAAGGTGAACTCGTTGTTAACTATATAA
ATCGCTGGAGAGCCATGAGTCTAGATTGCAAAGATCGTGTCACTGAATTCTTTTCCGTCGAGATGTGCATTCAAGGCATGCACTGGGAACTCCTCTACATCCTTAAAGGT
ATAAAGCCCCGCACCTTTGAGGAACTAGCAACTCGCGCCCACGATATGGAGCTAAGTATTGCTAGCCGAGAAAACCAAGACCTTCTCCTCCCTAATATGAGAAAAGAAGG
AAGGAACGACGAAGAGACTATAGAAGAATCTATGGTTGTAAACACAACCCTTCATAAGTCGAGTGCATCACTGAAGGCGAATCTGGTGACTACCCCTGCAGATCATCAAG
CCAACAGGCCGATCCAACAGATCATCAAGTCAGCAGGCCGATCATCCAAGAGGATCAACAAGCTAACAAGTCGATTCGACAGATCATCAAGCCAATCGACCGATCAAGAA
GATCAACAAGTCAGCAGACCGATCATCCAAGAAGATCAACAAGCCAACAGGCCGATCATCCAAGAAGATCAACAAATCAGCAGACCGATCATCAAACCGATCATCCGAGA
AGATCAAGAAGTCAGCAGACCGATCATCCAAGAAGATCAACAAGCCAACAGGCCGATCATCCAAGAAGATCAACAAGTTAACAGACCGATCATCCAAGAAGGTCAACAAG
CCAACAGGCCGATCATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAAGAGGATCAACAAGCTAACAAGCCGATCCGACAGATCATCAAGCCAATCGACCGATCAA
GAAGATCAACAAGTCAGCAGACCGATCATCCAAAAAGATCAACAAGCCAACAGGCTGATCATCCAAGAAGATCAACAAGTCAGCAAACCGATCATCAAACCGATCATCCG
AGAAGATCAACAAGTCAGCAGACCGATCATCCAAGAAGATCAACAAGCCAACAGGCCGATCATCCAAGAAGATCAACAAGTCACAACAGGCCGATCAAAGAGATCATTAA
GCCGGCAGGCCGATCATCCAAGAAGATCATCAAGCCAATAG
mRNA sequenceShow/hide mRNA sequence
ATGTCATTCAAGACTTCTTCGATGGTCGCTGTCGAGATCAAGTCTTACATGGGTTCAACTGCCCATTGTTGTTTCAATGAACTGAGGTTGCAAGAAGATAAAGCTTCTAT
CATTGCAAGCGAAGAAACAACCTTGCAGGGGGCATATACCAATGACAAGTTTCTTGTTAAGTATAACCCACTGTTTGAACCTGATTCTGACGTAGTGACTGTCATGATGA
CTGAGACAAGAACTATGGAAGAAAGAATGACTGAGATGCAAGAACACATCAACAACTTGATGAAGGCGATTGAAGAAAAAGATTCTCAAATTGAGCAACTAAAGAGCCAA
ATTGAGAACCAACATATCGCCGAATCAAGTCAAACCCAAGTCGTAAAAAATCACGACAAAGGAAAGTCTATAGTGCAAGATGATCATCCACAATGCTCTGTTTCGGTCGC
TTCACTATCCATCCAACAGCTCCAAGATATGATCACAAACTGTATCAGAGCTCAGTACGGTGGACCTACTCAAGATTCCCTCTTGTACTCCAAACCTTATACTAAGAGGA
TTGATAATTTTAGAACGTCAATCGGGTATCAGCCAACGAAATTTCAACAATTTGATGGAAAGGGCAATCCTAAACAACATATTGCCCACTTCGTTGAGATATGCGAGAAC
GCTGGTACTCGAGGGGACCTACTAGTCAAGCAGTTCATTCGAACACTTAAAGGAAATGCGTTTGACTGGTACACTGATCTAGAACCTGAGTCAGTAGACAATTGGGAGGA
ACTCGAAAGAGAGTTTTTGAATCGCTTCTACAACACTAGAAGAACCATTAGCATGTTCGAGCTCACCAACACTAAACAACGAAAAGGTGAACTCGTTGTTAACTATATAA
ATCGCTGGAGAGCCATGAGTCTAGATTGCAAAGATCGTGTCACTGAATTCTTTTCCGTCGAGATGTGCATTCAAGGCATGCACTGGGAACTCCTCTACATCCTTAAAGGT
ATAAAGCCCCGCACCTTTGAGGAACTAGCAACTCGCGCCCACGATATGGAGCTAAGTATTGCTAGCCGAGAAAACCAAGACCTTCTCCTCCCTAATATGAGAAAAGAAGG
AAGGAACGACGAAGAGACTATAGAAGAATCTATGGTTGTAAACACAACCCTTCATAAGTCGAGTGCATCACTGAAGGCGAATCTGGTGACTACCCCTGCAGATCATCAAG
CCAACAGGCCGATCCAACAGATCATCAAGTCAGCAGGCCGATCATCCAAGAGGATCAACAAGCTAACAAGTCGATTCGACAGATCATCAAGCCAATCGACCGATCAAGAA
GATCAACAAGTCAGCAGACCGATCATCCAAGAAGATCAACAAGCCAACAGGCCGATCATCCAAGAAGATCAACAAATCAGCAGACCGATCATCAAACCGATCATCCGAGA
AGATCAAGAAGTCAGCAGACCGATCATCCAAGAAGATCAACAAGCCAACAGGCCGATCATCCAAGAAGATCAACAAGTTAACAGACCGATCATCCAAGAAGGTCAACAAG
CCAACAGGCCGATCATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAAGAGGATCAACAAGCTAACAAGCCGATCCGACAGATCATCAAGCCAATCGACCGATCAA
GAAGATCAACAAGTCAGCAGACCGATCATCCAAAAAGATCAACAAGCCAACAGGCTGATCATCCAAGAAGATCAACAAGTCAGCAAACCGATCATCAAACCGATCATCCG
AGAAGATCAACAAGTCAGCAGACCGATCATCCAAGAAGATCAACAAGCCAACAGGCCGATCATCCAAGAAGATCAACAAGTCACAACAGGCCGATCAAAGAGATCATTAA
GCCGGCAGGCCGATCATCCAAGAAGATCATCAAGCCAATAG
Protein sequenceShow/hide protein sequence
MSFKTSSMVAVEIKSYMGSTAHCCFNELRLQEDKASIIASEETTLQGAYTNDKFLVKYNPLFEPDSDVVTVMMTETRTMEERMTEMQEHINNLMKAIEEKDSQIEQLKSQ
IENQHIAESSQTQVVKNHDKGKSIVQDDHPQCSVSVASLSIQQLQDMITNCIRAQYGGPTQDSLLYSKPYTKRIDNFRTSIGYQPTKFQQFDGKGNPKQHIAHFVEICEN
AGTRGDLLVKQFIRTLKGNAFDWYTDLEPESVDNWEELEREFLNRFYNTRRTISMFELTNTKQRKGELVVNYINRWRAMSLDCKDRVTEFFSVEMCIQGMHWELLYILKG
IKPRTFEELATRAHDMELSIASRENQDLLLPNMRKEGRNDEETIEESMVVNTTLHKSSASLKANLVTTPADHQANRPIQQIIKSAGRSSKRINKLTSRFDRSSSQSTDQE
DQQVSRPIIQEDQQANRPIIQEDQQISRPIIKPIIREDQEVSRPIIQEDQQANRPIIQEDQQVNRPIIQEGQQANRPIIKKINKSAGRSSKRINKLTSRSDRSSSQSTDQ
EDQQVSRPIIQKDQQANRLIIQEDQQVSKPIIKPIIREDQQVSRPIIQEDQQANRPIIQEDQQVTTGRSKRSLSRQADHPRRSSSQ