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Lag0008541 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0008541
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionred chlorophyll catabolite reductase-like
Genome locationchr9:24855810..24856429
RNA-Seq ExpressionLag0008541
SyntenyLag0008541
Gene Ontology termsGO:0015996 - chlorophyll catabolic process (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0051743 - red chlorophyll catabolite reductase activity (molecular function)
InterPro domainsIPR009439 - Red chlorophyll catabolite reductase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAJ80768.1 red chlorophyll catabolite reductase, partial [Citrullus lanatus]1.8e-2665.45Show/hide
Query:  LVPRVCYRLPLS--RFQGKRRTLPVLKAVSASVNM----GDGRRPSKLMEFPHLTAAHRDLMVDLIQAVEDRVGDHLLPSAVPSDVEYYQNDTGTSQGTL
        LV R CY +PL   RFQ K  +  VLKA   S       G G   SKLMEFPHLTAAHRDLMVDLIQ VE+ VG+HLLPS VP DVEYY+N +GTSQGTL
Subjt:  LVPRVCYRLPLS--RFQGKRRTLPVLKAVSASVNM----GDGRRPSKLMEFPHLTAAHRDLMVDLIQAVEDRVGDHLLPSAVPSDVEYYQNDTGTSQGTL

Query:  LIRSAIPSSP
        LIRSA+ SSP
Subjt:  LIRSAIPSSP

KAG6605236.1 Red chlorophyll catabolite reductase, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]1.1e-3475.22Show/hide
Query:  MAL-ALTLVPRVCYRLPLSRFQG--KRRTLPVLKAVSASVNMGDGRRPSKLMEFPHLTAAHRDLMVDLIQAVEDRVGDHLLPSAVPSDVEYYQNDTGTSQ
        MAL  LTLVPR CY LP  RF+G   RRT  V+KA   S  MG GR  SKLMEFPHLTAAHRDLMVDLIQAV+D VG+HLLPS VPSDVEYYQN TGTSQ
Subjt:  MAL-ALTLVPRVCYRLPLSRFQG--KRRTLPVLKAVSASVNMGDGRRPSKLMEFPHLTAAHRDLMVDLIQAVEDRVGDHLLPSAVPSDVEYYQNDTGTSQ

Query:  GTLLIRSAIPSSP
        GTLLIRSA+P SP
Subjt:  GTLLIRSAIPSSP

XP_022947254.1 red chlorophyll catabolite reductase-like [Cucurbita moschata]5.3e-3474.34Show/hide
Query:  MAL-ALTLVPRVCYRLPLSRFQG--KRRTLPVLKAVSASVNMGDGRRPSKLMEFPHLTAAHRDLMVDLIQAVEDRVGDHLLPSAVPSDVEYYQNDTGTSQ
        MAL  LTLVPR CY LP  RFQG  + RT  V+KA   S  MG GR  SKLMEFPHLTAAHRDLMVDLIQAV+D VG+HLLPS VPSDVEYYQN  GTSQ
Subjt:  MAL-ALTLVPRVCYRLPLSRFQG--KRRTLPVLKAVSASVNMGDGRRPSKLMEFPHLTAAHRDLMVDLIQAVEDRVGDHLLPSAVPSDVEYYQNDTGTSQ

Query:  GTLLIRSAIPSSP
        GTLLIRSA+P SP
Subjt:  GTLLIRSAIPSSP

XP_023007059.1 red chlorophyll catabolite reductase-like [Cucurbita maxima]5.7e-3677.68Show/hide
Query:  MAL-ALTLVPRVCYRLPLSRFQG-KRRTLPVLKAVSASVNMGDGRRPSKLMEFPHLTAAHRDLMVDLIQAVEDRVGDHLLPSAVPSDVEYYQNDTGTSQG
        MAL  LTLVPR CY LP SRF G +RRT  V+KA   S  MG GR  SKLMEFPHLTAAHRDLMVDLIQAV+D VG+HLLPS VPSDVEYYQN TGTSQG
Subjt:  MAL-ALTLVPRVCYRLPLSRFQG-KRRTLPVLKAVSASVNMGDGRRPSKLMEFPHLTAAHRDLMVDLIQAVEDRVGDHLLPSAVPSDVEYYQNDTGTSQG

Query:  TLLIRSAIPSSP
        TLLIRSAIP SP
Subjt:  TLLIRSAIPSSP

XP_023534656.1 red chlorophyll catabolite reductase-like [Cucurbita pepo subsp. pepo]8.2e-3575.89Show/hide
Query:  MAL-ALTLVPRVCYRLPLSRF-QGKRRTLPVLKAVSASVNMGDGRRPSKLMEFPHLTAAHRDLMVDLIQAVEDRVGDHLLPSAVPSDVEYYQNDTGTSQG
        MAL  LTLVPR CY LP  RF  G+RRT  V+KA   S  MG GR  SKLMEFPHLTAAHRDLMVDLIQAV+D VG+HLLPS VPSDVEYYQN TGTSQG
Subjt:  MAL-ALTLVPRVCYRLPLSRF-QGKRRTLPVLKAVSASVNMGDGRRPSKLMEFPHLTAAHRDLMVDLIQAVEDRVGDHLLPSAVPSDVEYYQNDTGTSQG

Query:  TLLIRSAIPSSP
        TLLIRSA+P SP
Subjt:  TLLIRSAIPSSP

TrEMBL top hitse value%identityAlignment
A0A0A0LLX2 Uncharacterized protein4.4e-2662.28Show/hide
Query:  LALTLVPRVCYRLPLS--RFQGKRRTLPVLKAV-SASVNMGDGRR---PSKLMEFPHLTAAHRDLMVDLIQAVEDRVGDHLLPSAVPSDVEYYQNDTGTS
        LA+ L+      +P S  RFQ KR + PVLKA   +S  M  G +    SKLMEFPHLTA+HRDLMVDLI+ VE+ +GDHLLPS VP+DVEYY+N  GTS
Subjt:  LALTLVPRVCYRLPLS--RFQGKRRTLPVLKAV-SASVNMGDGRR---PSKLMEFPHLTAAHRDLMVDLIQAVEDRVGDHLLPSAVPSDVEYYQNDTGTS

Query:  QGTLLIRSAIPSSP
        QGTLLIRSA+PSSP
Subjt:  QGTLLIRSAIPSSP

A0A6J1D8Q7 red chlorophyll catabolite reductase, chloroplastic-like3.2e-2461.82Show/hide
Query:  MALALTLVPRVCYRLPLSRFQGKRRTLPVLKAVSASVNMGDGRRPSKLMEFPHLTAAHRDLMVDLIQAVEDRVGDHLLPSAVPSDVEYYQNDTGTSQGTL
        M+LAL +   V          G RR +      SAS++ G   RPSKLMEFPHLTA HRDLMVDLIQAVEDR+ DHLLPSAVP DVE+YQN +GTSQGTL
Subjt:  MALALTLVPRVCYRLPLSRFQGKRRTLPVLKAVSASVNMGDGRRPSKLMEFPHLTAAHRDLMVDLIQAVEDRVGDHLLPSAVPSDVEYYQNDTGTSQGTL

Query:  LIRSAIPSSP
        L RS  P SP
Subjt:  LIRSAIPSSP

A0A6J1G694 red chlorophyll catabolite reductase-like2.6e-3474.34Show/hide
Query:  MAL-ALTLVPRVCYRLPLSRFQG--KRRTLPVLKAVSASVNMGDGRRPSKLMEFPHLTAAHRDLMVDLIQAVEDRVGDHLLPSAVPSDVEYYQNDTGTSQ
        MAL  LTLVPR CY LP  RFQG  + RT  V+KA   S  MG GR  SKLMEFPHLTAAHRDLMVDLIQAV+D VG+HLLPS VPSDVEYYQN  GTSQ
Subjt:  MAL-ALTLVPRVCYRLPLSRFQG--KRRTLPVLKAVSASVNMGDGRRPSKLMEFPHLTAAHRDLMVDLIQAVEDRVGDHLLPSAVPSDVEYYQNDTGTSQ

Query:  GTLLIRSAIPSSP
        GTLLIRSA+P SP
Subjt:  GTLLIRSAIPSSP

A0A6J1L3X1 red chlorophyll catabolite reductase-like2.8e-3677.68Show/hide
Query:  MAL-ALTLVPRVCYRLPLSRFQG-KRRTLPVLKAVSASVNMGDGRRPSKLMEFPHLTAAHRDLMVDLIQAVEDRVGDHLLPSAVPSDVEYYQNDTGTSQG
        MAL  LTLVPR CY LP SRF G +RRT  V+KA   S  MG GR  SKLMEFPHLTAAHRDLMVDLIQAV+D VG+HLLPS VPSDVEYYQN TGTSQG
Subjt:  MAL-ALTLVPRVCYRLPLSRFQG-KRRTLPVLKAVSASVNMGDGRRPSKLMEFPHLTAAHRDLMVDLIQAVEDRVGDHLLPSAVPSDVEYYQNDTGTSQG

Query:  TLLIRSAIPSSP
        TLLIRSAIP SP
Subjt:  TLLIRSAIPSSP

Q1ELT6 Red chlorophyll catabolite reductase (Fragment)8.9e-2765.45Show/hide
Query:  LVPRVCYRLPLS--RFQGKRRTLPVLKAVSASVNM----GDGRRPSKLMEFPHLTAAHRDLMVDLIQAVEDRVGDHLLPSAVPSDVEYYQNDTGTSQGTL
        LV R CY +PL   RFQ K  +  VLKA   S       G G   SKLMEFPHLTAAHRDLMVDLIQ VE+ VG+HLLPS VP DVEYY+N +GTSQGTL
Subjt:  LVPRVCYRLPLS--RFQGKRRTLPVLKAVSASVNM----GDGRRPSKLMEFPHLTAAHRDLMVDLIQAVEDRVGDHLLPSAVPSDVEYYQNDTGTSQGTL

Query:  LIRSAIPSSP
        LIRSA+ SSP
Subjt:  LIRSAIPSSP

SwissProt top hitse value%identityAlignment
Q8LDU4 Red chlorophyll catabolite reductase, chloroplastic1.1e-0838.75Show/hide
Query:  KAVSASVNMGDGRRPSKLMEFPHLTAAHRDLMVDLIQAVEDRVGDHLLPSAVPSDVEYYQNDTGTSQGTLLIRSAIPSSP
        +A   S+   D     K MEFP+++   + LMVDL+  VE+R+   LLP  +P DV  + N  G+++ +L IRS   SSP
Subjt:  KAVSASVNMGDGRRPSKLMEFPHLTAAHRDLMVDLIQAVEDRVGDHLLPSAVPSDVEYYQNDTGTSQGTLLIRSAIPSSP

Arabidopsis top hitse value%identityAlignment
AT4G37000.1 accelerated cell death 2 (ACD2)7.5e-1038.75Show/hide
Query:  KAVSASVNMGDGRRPSKLMEFPHLTAAHRDLMVDLIQAVEDRVGDHLLPSAVPSDVEYYQNDTGTSQGTLLIRSAIPSSP
        +A   S+   D     K MEFP+++   + LMVDL+  VE+R+   LLP  +P DV  + N  G+++ +L IRS   SSP
Subjt:  KAVSASVNMGDGRRPSKLMEFPHLTAAHRDLMVDLIQAVEDRVGDHLLPSAVPSDVEYYQNDTGTSQGTLLIRSAIPSSP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTTGGCTCTGACGCTGGTTCCGAGAGTTTGTTATCGTCTTCCACTGTCTCGTTTCCAGGGAAAAAGAAGAACACTACCAGTACTTAAGGCGGTGTCGGCGTCGGT
GAACATGGGGGATGGTCGGCGGCCGTCGAAGCTGATGGAGTTTCCGCATCTAACGGCTGCCCACAGAGATCTGATGGTGGATCTAATCCAGGCCGTTGAAGACAGAGTGG
GAGACCATCTTCTTCCGTCGGCGGTTCCTTCAGATGTGGAGTACTATCAGAACGACACCGGCACTTCACAGGGCACTCTTCTCATCCGATCTGCCATTCCATCTTCTCCG
AAATTTGGAGGAATTAGATTTTTTTTTCCTACTAGTATTTTTCCTCCTCCTCCGCTGTTTTGGCCTTCCACAGCAGAGGTGAGAGGTGTATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTTGGCTCTGACGCTGGTTCCGAGAGTTTGTTATCGTCTTCCACTGTCTCGTTTCCAGGGAAAAAGAAGAACACTACCAGTACTTAAGGCGGTGTCGGCGTCGGT
GAACATGGGGGATGGTCGGCGGCCGTCGAAGCTGATGGAGTTTCCGCATCTAACGGCTGCCCACAGAGATCTGATGGTGGATCTAATCCAGGCCGTTGAAGACAGAGTGG
GAGACCATCTTCTTCCGTCGGCGGTTCCTTCAGATGTGGAGTACTATCAGAACGACACCGGCACTTCACAGGGCACTCTTCTCATCCGATCTGCCATTCCATCTTCTCCG
AAATTTGGAGGAATTAGATTTTTTTTTCCTACTAGTATTTTTCCTCCTCCTCCGCTGTTTTGGCCTTCCACAGCAGAGGTGAGAGGTGTATAA
Protein sequenceShow/hide protein sequence
MALALTLVPRVCYRLPLSRFQGKRRTLPVLKAVSASVNMGDGRRPSKLMEFPHLTAAHRDLMVDLIQAVEDRVGDHLLPSAVPSDVEYYQNDTGTSQGTLLIRSAIPSSP
KFGGIRFFFPTSIFPPPPLFWPSTAEVRGV