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Lag0008544 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0008544
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibosomal_S7 domain-containing protein
Genome locationchr9:24912503..24913093
RNA-Seq ExpressionLag0008544
SyntenyLag0008544
Gene Ontology termsGO:0009507 - chloroplast (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAF1728903.1 unnamed protein product [Brassica napus]1.9e-3792.13Show/hide
Query:  FGCEAVSNQNTQQALALPENEVIQPHLPVRLPCYDFTPITRPAFGIPLLAVKVTTSGMASSHSVTGGVYKARERIHRRMADRRLLAIPA
        FG EAVSN NTQ+ALALPE EVIQPHLPVRLPCYDFTP+T PAFG PLLAVKVTTSGMASSHSVTGGVYKARERIHRRMADRRLLAIPA
Subjt:  FGCEAVSNQNTQQALALPENEVIQPHLPVRLPCYDFTPITRPAFGIPLLAVKVTTSGMASSHSVTGGVYKARERIHRRMADRRLLAIPA
KAD5960821.1 hypothetical protein E3N88_12293 [Mikania micrantha]2.0e-4295.74Show/hide
Query:  RSSLLFGCEAVSNQNTQQALALPENEVIQPHLPVRLPCYDFTPITRPAFGIPLLAVKVTTSGMASSHSVTGGVYKARERIHRRMADRRLLAIPA
        RSSLLFGCEAVSNQNTQQALALPE EVIQPHLPVRLPCYDFTP+T PAFGIPLLAVKVTTSGMASSHSVTGGVYKARERIHRRMADR+LLAIPA
Subjt:  RSSLLFGCEAVSNQNTQQALALPENEVIQPHLPVRLPCYDFTPITRPAFGIPLLAVKVTTSGMASSHSVTGGVYKARERIHRRMADRRLLAIPA
KAG2241182.1 hypothetical protein Bca52824_096832 [Brassica carinata]1.0e-3893.26Show/hide
Query:  FGCEAVSNQNTQQALALPENEVIQPHLPVRLPCYDFTPITRPAFGIPLLAVKVTTSGMASSHSVTGGVYKARERIHRRMADRRLLAIPA
        FGCEAVSN NTQ+ALALPE EVIQPHLPVRLPCYDFTP+T PAFG PLLAVKVTTSGMASSHSVTGGVYKARERIHRRMADRRLLAIPA
Subjt:  FGCEAVSNQNTQQALALPENEVIQPHLPVRLPCYDFTPITRPAFGIPLLAVKVTTSGMASSHSVTGGVYKARERIHRRMADRRLLAIPA
KAG4154841.1 hypothetical protein ERO13_D03G074976v2 [Gossypium hirsutum]7.2e-3796.43Show/hide
Query:  VSNQNTQQALALPENEVIQPHLPVRLPCYDFTPITRPAFGIPLLAVKVTTSGMASSHSVTGGVYKARERIHRRMADRRLLAIPA
        VSNQNTQQALALPE EVIQPHLPVRLPCYDFTP+T PAFGIPLLAVKVTTSGMASSHSVTGGVYKARERIHRRMADRRLLAIPA
Subjt:  VSNQNTQQALALPENEVIQPHLPVRLPCYDFTPITRPAFGIPLLAVKVTTSGMASSHSVTGGVYKARERIHRRMADRRLLAIPA
PPR87032.1 hypothetical protein GOBAR_AA33653 [Gossypium barbadense]3.2e-3792.05Show/hide
Query:  GCEAVSNQNTQQALALPENEVIQPHLPVRLPCYDFTPITRPAFGIPLLAVKVTTSGMASSHSVTGGVYKARERIHRRMADRRLLAIPA
        G   +SNQNTQQALALPE EVIQPHLPVRLPCYDFTP+T PAFGIPLLAVKVTTSGMASSHSVTGGVYKARERIHRRMADRRLLAIPA
Subjt:  GCEAVSNQNTQQALALPENEVIQPHLPVRLPCYDFTPITRPAFGIPLLAVKVTTSGMASSHSVTGGVYKARERIHRRMADRRLLAIPA
TrEMBL top hitse value%identityAlignment
A0A078E1E5 BnaC09g29260D protein9.2e-3892.13Show/hide
Query:  FGCEAVSNQNTQQALALPENEVIQPHLPVRLPCYDFTPITRPAFGIPLLAVKVTTSGMASSHSVTGGVYKARERIHRRMADRRLLAIPA
        FG EAVSN NTQ+ALALPE EVIQPHLPVRLPCYDFTP+T PAFG PLLAVKVTTSGMASSHSVTGGVYKARERIHRRMADRRLLAIPA
Subjt:  FGCEAVSNQNTQQALALPENEVIQPHLPVRLPCYDFTPITRPAFGIPLLAVKVTTSGMASSHSVTGGVYKARERIHRRMADRRLLAIPA
A0A2P5W7G6 Uncharacterized protein1.6e-3792.05Show/hide
Query:  GCEAVSNQNTQQALALPENEVIQPHLPVRLPCYDFTPITRPAFGIPLLAVKVTTSGMASSHSVTGGVYKARERIHRRMADRRLLAIPA
        G   +SNQNTQQALALPE EVIQPHLPVRLPCYDFTP+T PAFGIPLLAVKVTTSGMASSHSVTGGVYKARERIHRRMADRRLLAIPA
Subjt:  GCEAVSNQNTQQALALPENEVIQPHLPVRLPCYDFTPITRPAFGIPLLAVKVTTSGMASSHSVTGGVYKARERIHRRMADRRLLAIPA
A0A3P6GJR6 Uncharacterized protein9.2e-3892.13Show/hide
Query:  FGCEAVSNQNTQQALALPENEVIQPHLPVRLPCYDFTPITRPAFGIPLLAVKVTTSGMASSHSVTGGVYKARERIHRRMADRRLLAIPA
        FG EAVSN NTQ+ALALPE EVIQPHLPVRLPCYDFTP+T PAFG PLLAVKVTTSGMASSHSVTGGVYKARERIHRRMADRRLLAIPA
Subjt:  FGCEAVSNQNTQQALALPENEVIQPHLPVRLPCYDFTPITRPAFGIPLLAVKVTTSGMASSHSVTGGVYKARERIHRRMADRRLLAIPA
A0A5N6P537 Uncharacterized protein9.5e-4395.74Show/hide
Query:  RSSLLFGCEAVSNQNTQQALALPENEVIQPHLPVRLPCYDFTPITRPAFGIPLLAVKVTTSGMASSHSVTGGVYKARERIHRRMADRRLLAIPA
        RSSLLFGCEAVSNQNTQQALALPE EVIQPHLPVRLPCYDFTP+T PAFGIPLLAVKVTTSGMASSHSVTGGVYKARERIHRRMADR+LLAIPA
Subjt:  RSSLLFGCEAVSNQNTQQALALPENEVIQPHLPVRLPCYDFTPITRPAFGIPLLAVKVTTSGMASSHSVTGGVYKARERIHRRMADRRLLAIPA
A0A6D2HHK8 Uncharacterized protein4.9e-3993.26Show/hide
Query:  FGCEAVSNQNTQQALALPENEVIQPHLPVRLPCYDFTPITRPAFGIPLLAVKVTTSGMASSHSVTGGVYKARERIHRRMADRRLLAIPA
        FGCEAVSN NTQ+ALALPE EVIQPHLPVRLPCYDFTP+T PAFG PLLAVKVTTSGMASSHSVTGGVYKARERIHRRMADRRLLAIPA
Subjt:  FGCEAVSNQNTQQALALPENEVIQPHLPVRLPCYDFTPITRPAFGIPLLAVKVTTSGMASSHSVTGGVYKARERIHRRMADRRLLAIPA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATACAAAGGAATTGGTAAATTCTATTTAGATTTATGGAGTTTTGTATCCCCCGAATATTGGGTAGCTGTTGTTAAACCAGGTAGACGTAGCTCGCTTCTTTTTGG
GTGTGAAGCAGTGTCAAACCAAAATACCCAACAAGCATTAGCTCTCCCTGAAAATGAGGTGATCCAGCCGCACCTTCCAGTACGGCTACCTTGTTACGACTTCACTCCAA
TCACTAGACCTGCCTTCGGCATCCCCCTCCTTGCGGTTAAGGTAACGACTTCGGGCATGGCCAGCTCCCATAGTGTGACAGGCGGTGTGTACAAGGCCCGGGAACGAATT
CACCGCCGTATGGCTGACCGACGATTACTAGCGATTCCGGCTTGGCCGCCGGCGACCGTCGACGAGCTCTTTTTTTTCGTTTCTTTTTCTCCTTGTTTTCTTCCCCCTTG
TCTATGTGTTTTCTGTAACACCCCCAAATTCTCAAGAGACTATGTAAAAGAACTACTAATCTTAGTCACATTATTCTTTAAGGGGCTACCAAAAATTTGGCAGCATAACG
ACGTAGTTTTGCTTAACCCAAAATTTTACAACCTGTTATAA
mRNA sequenceShow/hide mRNA sequence
ATGAAATACAAAGGAATTGGTAAATTCTATTTAGATTTATGGAGTTTTGTATCCCCCGAATATTGGGTAGCTGTTGTTAAACCAGGTAGACGTAGCTCGCTTCTTTTTGG
GTGTGAAGCAGTGTCAAACCAAAATACCCAACAAGCATTAGCTCTCCCTGAAAATGAGGTGATCCAGCCGCACCTTCCAGTACGGCTACCTTGTTACGACTTCACTCCAA
TCACTAGACCTGCCTTCGGCATCCCCCTCCTTGCGGTTAAGGTAACGACTTCGGGCATGGCCAGCTCCCATAGTGTGACAGGCGGTGTGTACAAGGCCCGGGAACGAATT
CACCGCCGTATGGCTGACCGACGATTACTAGCGATTCCGGCTTGGCCGCCGGCGACCGTCGACGAGCTCTTTTTTTTCGTTTCTTTTTCTCCTTGTTTTCTTCCCCCTTG
TCTATGTGTTTTCTGTAACACCCCCAAATTCTCAAGAGACTATGTAAAAGAACTACTAATCTTAGTCACATTATTCTTTAAGGGGCTACCAAAAATTTGGCAGCATAACG
ACGTAGTTTTGCTTAACCCAAAATTTTACAACCTGTTATAA
Protein sequenceShow/hide protein sequence
MKYKGIGKFYLDLWSFVSPEYWVAVVKPGRRSSLLFGCEAVSNQNTQQALALPENEVIQPHLPVRLPCYDFTPITRPAFGIPLLAVKVTTSGMASSHSVTGGVYKARERI
HRRMADRRLLAIPAWPPATVDELFFFVSFSPCFLPPCLCVFCNTPKFSRDYVKELLILVTLFFKGLPKIWQHNDVVLLNPKFYNLL