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Lag0008552 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0008552
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H-like superfamily protein
Genome locationchr9:25200775..25201164
RNA-Seq ExpressionLag0008552
SyntenyLag0008552
Gene Ontology termsGO:0044237 - cellular metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0071704 - organic substance metabolic process (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
GO:0016740 - transferase activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EMS54402.1 Ketohexokinase [Triticum urartu]7.2e-0934.55Show/hide
Query:  GNSVAELKAILEGLKLAVMLGCKQIIVESGCLMAINLVNRSSEVWGEEELLVAEIRAFIPLFEFISFSFIHREGNMVADKIAKWARSLGSNDTWAFNFPS
        G   AEL AI  G+ LA  +GC  I +ES C  A++ +N+  +  G E  ++ E +  +  F  ISF   +RE N VADK+AK + +  S+ +W    P 
Subjt:  GNSVAELKAILEGLKLAVMLGCKQIIVESGCLMAINLVNRSSEVWGEEELLVAEIRAFIPLFEFISFSFIHREGNMVADKIAKWARSLGSNDTWAFNFPS

Query:  WIVDVVKDDL
        +I  ++ +D+
Subjt:  WIVDVVKDDL

KMS97072.1 hypothetical protein BVRB_7g179330 [Beta vulgaris subsp. vulgaris]5.9e-1134.26Show/hide
Query:  AELKAILEGLKLAVMLGCKQIIVESGCLMAINLVNRSSEVWGEEELLVAEIRAFIPLFEFISFSFIHREGNMVADKIAKWARSLGSNDTWAFNFPSWIVD
        AE  A+L   + A+  G   +++ES   + IN +N   +  G+ + ++ ++   +P FE I FSF +RE N +A ++AKWA S   ++ W    PSWI D
Subjt:  AELKAILEGLKLAVMLGCKQIIVESGCLMAINLVNRSSEVWGEEELLVAEIRAFIPLFEFISFSFIHREGNMVADKIAKWARSLGSNDTWAFNFPSWIVD

Query:  VVKDDLPN
        ++  D PN
Subjt:  VVKDDLPN

VAH65567.1 unnamed protein product [Triticum turgidum subsp. durum]5.5e-0934.55Show/hide
Query:  GNSVAELKAILEGLKLAVMLGCKQIIVESGCLMAINLVNRSSEVWGEEELLVAEIRAFIPLFEFISFSFIHREGNMVADKIAKWARSLGSNDTWAFNFPS
        G   AEL AI  G+ LA  +GC  I +ES C  A+N +N+  +  G E  ++ E +  +  F  ISF   +RE N VAD++AK   +  S+ +W    P 
Subjt:  GNSVAELKAILEGLKLAVMLGCKQIIVESGCLMAINLVNRSSEVWGEEELLVAEIRAFIPLFEFISFSFIHREGNMVADKIAKWARSLGSNDTWAFNFPS

Query:  WIVDVVKDDL
        +I  ++ +D+
Subjt:  WIVDVVKDDL

XP_021769837.1 uncharacterized protein LOC110734082 [Chenopodium quinoa]1.9e-0935Show/hide
Query:  TSFTDVELGNSVAELKAILEGLKLAVMLGCKQIIVESGCLMAINLVNRSSEVWGEEELLVAEIRAFIPLFEFISFSFIHREGNMVADKIAKWARSLGSND
        T   D     ++AE KA+L GL++ V LG K +++ES CL  IN V+          L++ ++     LFE I +SF+ REGN VA ++A          
Subjt:  TSFTDVELGNSVAELKAILEGLKLAVMLGCKQIIVESGCLMAINLVNRSSEVWGEEELLVAEIRAFIPLFEFISFSFIHREGNMVADKIAKWARSLGSND

Query:  TWAFNFPSWIVDVVKDDLPN
         W+  FP  IV ++  DLP+
Subjt:  TWAFNFPSWIVDVVKDDLPN

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]5.7e-1443.1Show/hide
Query:  VAELKAILEGLKLAVMLGCKQIIVESGCLMAINLVNRSSEVWGEEELLVAEIRAFIPLFEFISFSFIHREGNMVADKIAKWA-RSLGSNDTWAFNFPSWI
        +AE++ ILEGLK A       + VES  L+AI L+       G+E+  V EI+A    F FISFS   R+ N  A  +AKW   S  +   W FNFP+W+
Subjt:  VAELKAILEGLKLAVMLGCKQIIVESGCLMAINLVNRSSEVWGEEELLVAEIRAFIPLFEFISFSFIHREGNMVADKIAKWA-RSLGSNDTWAFNFPSWI

Query:  VDVVKDDLP-NFAQVA
        +D+V+ D P NFA VA
Subjt:  VDVVKDDLP-NFAQVA

TrEMBL top hitse value%identityAlignment
A0A0J8BAU9 Uncharacterized protein2.8e-1134.26Show/hide
Query:  AELKAILEGLKLAVMLGCKQIIVESGCLMAINLVNRSSEVWGEEELLVAEIRAFIPLFEFISFSFIHREGNMVADKIAKWARSLGSNDTWAFNFPSWIVD
        AE  A+L   + A+  G   +++ES   + IN +N   +  G+ + ++ ++   +P FE I FSF +RE N +A ++AKWA S   ++ W    PSWI D
Subjt:  AELKAILEGLKLAVMLGCKQIIVESGCLMAINLVNRSSEVWGEEELLVAEIRAFIPLFEFISFSFIHREGNMVADKIAKWARSLGSNDTWAFNFPSWIVD

Query:  VVKDDLPN
        ++  D PN
Subjt:  VVKDDLPN

A0A446NU09 RNase H domain-containing protein2.7e-0934.55Show/hide
Query:  GNSVAELKAILEGLKLAVMLGCKQIIVESGCLMAINLVNRSSEVWGEEELLVAEIRAFIPLFEFISFSFIHREGNMVADKIAKWARSLGSNDTWAFNFPS
        G   AEL AI  G+ LA  +GC  I +ES C  A+N +N+  +  G E  ++ E +  +  F  ISF   +RE N VAD++AK   +  S+ +W    P 
Subjt:  GNSVAELKAILEGLKLAVMLGCKQIIVESGCLMAINLVNRSSEVWGEEELLVAEIRAFIPLFEFISFSFIHREGNMVADKIAKWARSLGSNDTWAFNFPS

Query:  WIVDVVKDDL
        +I  ++ +D+
Subjt:  WIVDVVKDDL

A0A6J1DX30 uncharacterized protein LOC1110248742.7e-1443.1Show/hide
Query:  VAELKAILEGLKLAVMLGCKQIIVESGCLMAINLVNRSSEVWGEEELLVAEIRAFIPLFEFISFSFIHREGNMVADKIAKWA-RSLGSNDTWAFNFPSWI
        +AE++ ILEGLK A       + VES  L+AI L+       G+E+  V EI+A    F FISFS   R+ N  A  +AKW   S  +   W FNFP+W+
Subjt:  VAELKAILEGLKLAVMLGCKQIIVESGCLMAINLVNRSSEVWGEEELLVAEIRAFIPLFEFISFSFIHREGNMVADKIAKWA-RSLGSNDTWAFNFPSWI

Query:  VDVVKDDLP-NFAQVA
        +D+V+ D P NFA VA
Subjt:  VDVVKDDLP-NFAQVA

A0A803N666 Uncharacterized protein2.4e-1039.09Show/hide
Query:  SVAELKAILEGLKLAVMLGCKQIIVESGCLMAINLVNRSSEVWGEEELLVAEIRAFIPLFEFISFSFIHREGNMVADKIAKWARSLGSNDTWAFNFPSWI
        ++ E KA+L GL+ AV  G ++++VES CL  IN ++          L++ +I       +F+S SF+HREGN VA ++A     +GS   W  NFPS I
Subjt:  SVAELKAILEGLKLAVMLGCKQIIVESGCLMAINLVNRSSEVWGEEELLVAEIRAFIPLFEFISFSFIHREGNMVADKIAKWARSLGSNDTWAFNFPSWI

Query:  VDVVKDDLPN
         D++  DLPN
Subjt:  VDVVKDDLPN

M7Z366 Ketohexokinase3.5e-0934.55Show/hide
Query:  GNSVAELKAILEGLKLAVMLGCKQIIVESGCLMAINLVNRSSEVWGEEELLVAEIRAFIPLFEFISFSFIHREGNMVADKIAKWARSLGSNDTWAFNFPS
        G   AEL AI  G+ LA  +GC  I +ES C  A++ +N+  +  G E  ++ E +  +  F  ISF   +RE N VADK+AK + +  S+ +W    P 
Subjt:  GNSVAELKAILEGLKLAVMLGCKQIIVESGCLMAINLVNRSSEVWGEEELLVAEIRAFIPLFEFISFSFIHREGNMVADKIAKWARSLGSNDTWAFNFPS

Query:  WIVDVVKDDL
        +I  ++ +D+
Subjt:  WIVDVVKDDL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G13980.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein4.6e-0634.31Show/hide
Query:  AELKAILEGLKLAVMLGCKQIIVESGCLMAINLVNRSSEVWGEEELLVAEIRAFIPLFEFISFSFIHREGNMVADKIAKWARSLGSNDTWAFN----FPS
        AE KA+L  L+   + G  ++I+E  C    NLV+ SS        L+ +IR +   F  + FSF+ R GN VA ++AK    LG N T  ++     P 
Subjt:  AELKAILEGLKLAVMLGCKQIIVESGCLMAINLVNRSSEVWGEEELLVAEIRAFIPLFEFISFSFIHREGNMVADKIAKWARSLGSNDTWAFN----FPS

Query:  WI
        W+
Subjt:  WI

AT2G34320.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein9.3e-0734.65Show/hide
Query:  LKAILEGLKLAVM----LGCKQIIVESGCLMAINLVNRSSEVWGEEELLVAEIRAFIPLFEFISFSFIHREGNMVADKIAKWARSLGSNDTWAFNF-PSW
        L+A LE L+ AV+       K+II ES     +NL+N S + W   +  + +I+  +  FE + F F  R GN VAD+IA+ + S  + D   F+  P W
Subjt:  LKAILEGLKLAVM----LGCKQIIVESGCLMAINLVNRSSEVWGEEELLVAEIRAFIPLFEFISFSFIHREGNMVADKIAKWARSLGSNDTWAFNF-PSW

Query:  I
        +
Subjt:  I

AT4G29090.1 Ribonuclease H-like superfamily protein1.9e-0428Show/hide
Query:  LKAILEGLKLAVM----LGCKQIIVESGCLMAINLVNRSSEVWGEEELLVAEIRAFIPLFEFISFSFIHREGNMVADKIAKWARSLGSNDTWAFNF-PSW
        L+A LE ++ AV+         +I ES   + I ++N + E+W   +  + +++  +  F  + F FI REGN +A+++A+ + S  + D   ++  PSW
Subjt:  LKAILEGLKLAVM----LGCKQIIVESGCLMAINLVNRSSEVWGEEELLVAEIRAFIPLFEFISFSFIHREGNMVADKIAKWARSLGSNDTWAFNF-PSW

AT5G38920.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein4.3e-0429.03Show/hide
Query:  RTSFTDVE-LGNSVAELKAILEGLKLAVM----LGCKQIIVESGCLMAINLVNRSSEVWGEEELLVAEIRAFIPLFEFISFSFIHREGNMVADKIAKWAR
        RT F  V+ L  + + L    E ++ AV+    L  +++I ES     ++++  + ++   + +L  +I+  +  FE   F F+HR GN VAD+IAK + 
Subjt:  RTSFTDVE-LGNSVAELKAILEGLKLAVM----LGCKQIIVESGCLMAINLVNRSSEVWGEEELLVAEIRAFIPLFEFISFSFIHREGNMVADKIAKWAR

Query:  SLGSNDTWAFNF-PSWIVDVVKDD
        SL + D   ++  P W+   V+ D
Subjt:  SLGSNDTWAFNF-PSWIVDVVKDD

AT5G65005.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein5.7e-0428.97Show/hide
Query:  AELKAILEGLKLAVMLGCKQIIVESGCLMAINLVNRSSEVWGEEELLVAEIRAFIPLFEFISFSFIHREGNMVADKIAKWARSLGSNDTWAF--NFPSWI
        AE   ++  ++ +   G K++I E        ++N  S     +  L   I+++IP FE I FSF HRE N  AD +AK  +++  N  W+   + P ++
Subjt:  AELKAILEGLKLAVMLGCKQIIVESGCLMAINLVNRSSEVWGEEELLVAEIRAFIPLFEFISFSFIHREGNMVADKIAKWARSLGSNDTWAF--NFPSWI

Query:  VDVVKDD
           V +D
Subjt:  VDVVKDD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGAACGTCTTTCACCGATGTTGAGCTTGGAAATTCTGTTGCAGAACTTAAAGCAATTCTTGAGGGCCTAAAATTAGCTGTGATGTTGGGTTGCAAGCAGATCATCGT
GGAATCTGGTTGTCTGATGGCCATCAATTTGGTTAATCGAAGTTCAGAAGTTTGGGGGGAGGAAGAGCTTTTAGTTGCAGAAATTAGGGCTTTTATTCCTCTATTTGAGT
TTATTTCTTTTTCTTTTATCCATCGAGAAGGAAATATGGTGGCTGATAAGATTGCTAAATGGGCTAGAAGCTTAGGTTCAAATGATACTTGGGCCTTTAATTTCCCTAGT
TGGATTGTTGATGTGGTCAAGGATGACCTTCCAAATTTTGCCCAAGTGGCGTTTATATAA
mRNA sequenceShow/hide mRNA sequence
ATGCGAACGTCTTTCACCGATGTTGAGCTTGGAAATTCTGTTGCAGAACTTAAAGCAATTCTTGAGGGCCTAAAATTAGCTGTGATGTTGGGTTGCAAGCAGATCATCGT
GGAATCTGGTTGTCTGATGGCCATCAATTTGGTTAATCGAAGTTCAGAAGTTTGGGGGGAGGAAGAGCTTTTAGTTGCAGAAATTAGGGCTTTTATTCCTCTATTTGAGT
TTATTTCTTTTTCTTTTATCCATCGAGAAGGAAATATGGTGGCTGATAAGATTGCTAAATGGGCTAGAAGCTTAGGTTCAAATGATACTTGGGCCTTTAATTTCCCTAGT
TGGATTGTTGATGTGGTCAAGGATGACCTTCCAAATTTTGCCCAAGTGGCGTTTATATAA
Protein sequenceShow/hide protein sequence
MRTSFTDVELGNSVAELKAILEGLKLAVMLGCKQIIVESGCLMAINLVNRSSEVWGEEELLVAEIRAFIPLFEFISFSFIHREGNMVADKIAKWARSLGSNDTWAFNFPS
WIVDVVKDDLPNFAQVAFI