; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0008559 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0008559
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr9:25354792..25355727
RNA-Seq ExpressionLag0008559
SyntenyLag0008559
Gene Ontology termsNA
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4360362.1 hypothetical protein F8388_019448 [Cannabis sativa]3.0e-2945.83Show/hide
Query:  DLRLRKLEIPVFGGASPLEWLHQVERYFTVNRLTESEKLEAAVLCLEGVALKWHYYENKLGSFSNWEDFRRLLLRRFLAPKEGTLHERFFALKQESTVAE
        + R R +E+PVF G+ P +W  + ERYF + RLT  E+LEAA+LCLEG AL+W  +EN+      W + + LLLRRFL   EG++++RF AL+Q +TV E
Subjt:  DLRLRKLEIPVFGGASPLEWLHQVERYFTVNRLTESEKLEAAVLCLEGVALKWHYYENKLGSFSNWEDFRRLLLRRFLAPKEGTLHERFFALKQESTVAE

Query:  YREKFEEFAAAVDNLDGDSLEGKFVDGLVEDIKVEMRICMPVGL
        YR++FE  A ++  +    LE  F+ GL EDI+  +R+  P+GL
Subjt:  YREKFEEFAAAVDNLDGDSLEGKFVDGLVEDIKVEMRICMPVGL

KAF4369344.1 hypothetical protein F8388_019569 [Cannabis sativa]8.8e-2943.45Show/hide
Query:  DLRLRKLEIPVFGGASPLEWLHQVERYFTVNRLTESEKLEAAVLCLEGVALKWHYYENKLGSFSNWEDFRRLLLRRFLAPKEGTLHERFFALKQESTVAE
        + R RK+E+PV+ G  P EW ++V+RYF + RL+ +E+LEAA++CLEG AL W  +EN      +WE+ + +L+ RF +  EG +++RFF+L+Q  TV +
Subjt:  DLRLRKLEIPVFGGASPLEWLHQVERYFTVNRLTESEKLEAAVLCLEGVALKWHYYENKLGSFSNWEDFRRLLLRRFLAPKEGTLHERFFALKQESTVAE

Query:  YREKFEEFAAAVDNLDGDSLEGKFVDGLVEDIKVEMRICMPVGLM
        YR KFE  AAA+  +    L+  FV+GL  DI+  +R+  P GL+
Subjt:  YREKFEEFAAAVDNLDGDSLEGKFVDGLVEDIKVEMRICMPVGLM

TXG60193.1 hypothetical protein EZV62_014766 [Acer yangbiense]8.8e-2933.99Show/hide
Query:  ENLEGRMLELSKEMAGMRQEISGIRGSISTEVEAAVSKSVGEAMKEGMQAILARIEGLKSTDQAVDNRKTKGKNIIGSEEVAAEVGEGSNTVLQSHLTKS
        +N++ RM  + + +  +R+++    G+I  E+  A++K     ++  MQ   AR+    S           GK   G E  +     G   +  +H ++ 
Subjt:  ENLEGRMLELSKEMAGMRQEISGIRGSISTEVEAAVSKSVGEAMKEGMQAILARIEGLKSTDQAVDNRKTKGKNIIGSEEVAAEVGEGSNTVLQSHLTKS

Query:  LAPVF----DLRLRKLEIPVFGGASPLEWLHQVERYFTVNRLTESEKLEAAVLCLEGVALKWHYYENKLGSFSNWEDFRRLLLRRFLAPKEGTLHERFFA
         + VF    D R RKLE+PVF G +P  W+ + ERYF++ R    EKLEA+V+  EG AL W+ +E+K      WE+ + L+L++F + +EG+LHE+F A
Subjt:  LAPVF----DLRLRKLEIPVFGGASPLEWLHQVERYFTVNRLTESEKLEAAVLCLEGVALKWHYYENKLGSFSNWEDFRRLLLRRFLAPKEGTLHERFFA

Query:  LKQESTVAEYREKFEEFAAAVDNLDGDSLEGKFVDGLVEDIKVEMRICMPVGL
        L+Q+ TV EYR KF EF A +DN+  +    +F++GL  +I+ E+R+  P+ L
Subjt:  LKQESTVAEYREKFEEFAAAVDNLDGDSLEGKFVDGLVEDIKVEMRICMPVGL

XP_022848903.1 uncharacterized protein LOC111371244 [Olea europaea var. sylvestris]3.2e-3138.4Show/hide
Query:  LEGRMLELSKEMAGMRQEISGIRGSISTEVEAAVSKSVGEAMKEGMQAILARIEGLKSTDQAVDNRKTKGKNIIGSEEVAAEVGEG-SNTVLQSHLTKSL
        L  RM  L +   G++QE+     +I  E++  +S      +KE  + +L++ EG     QA D    KGK + GS  +AA   E  SN        K L
Subjt:  LEGRMLELSKEMAGMRQEISGIRGSISTEVEAAVSKSVGEAMKEGMQAILARIEGLKSTDQAVDNRKTKGKNIIGSEEVAAEVGEG-SNTVLQSHLTKSL

Query:  APV--FDLRLRKLEIPVFGGASPLEWLHQVERYFTVNRLTESEKLEAAVLCLEGVALKWHYYENKLGSFSNWEDFRRLLLRRFLAPKEGTLHERFFALKQ
              D R R+LE+PVF G +P  WL + ERYF++N  +  EK+EAA +C EG AL W+ +E+   +F  WED +  LL RF   +EGT  E+F AL+Q
Subjt:  APV--FDLRLRKLEIPVFGGASPLEWLHQVERYFTVNRLTESEKLEAAVLCLEGVALKWHYYENKLGSFSNWEDFRRLLLRRFLAPKEGTLHERFFALKQ

Query:  ESTVAEYREKFEEFAAAVDNLDGDSLEGKFVDGLVEDIKVEMRICMPVGL
        E TV +Y   FE  AA +  +  D LEG F++GL   I+ E+R+  P GL
Subjt:  ESTVAEYREKFEEFAAAVDNLDGDSLEGKFVDGLVEDIKVEMRICMPVGL

XP_038904464.1 uncharacterized protein LOC120090832 [Benincasa hispida]1.4e-3134.72Show/hide
Query:  MATRMETRVENLEGRMLELSKEMAGMRQEISGIRGSISTEVEAAVSKSVGEAMKEGM----QAILARIEGLKSTDQAVDNRKTKGKNIIGSEEVAAEVGE
        M  +ME R+  +E ++  L   M     +       I+  +  A  +++GE +++ M    +    ++E LK  +     +    +   G +    +VGE
Subjt:  MATRMETRVENLEGRMLELSKEMAGMRQEISGIRGSISTEVEAAVSKSVGEAMKEGM----QAILARIEGLKSTDQAVDNRKTKGKNIIGSEEVAAEVGE

Query:  GSNTVLQSHLTKSLAPVFDLRLRKLEIPVFG---GASPLEWLHQVERYFTVNRLTESEKLEAAVLCLEGVALKWHYYENKLGSFSNWEDFRRLLLRRFLA
            +L           FD+RLRKLEIP+F    G  P+ W H+VERYF VNRL+E +K+EAA+LCLEG AL+WH +E +    + W  F+  LL RFL 
Subjt:  GSNTVLQSHLTKSLAPVFDLRLRKLEIPVFG---GASPLEWLHQVERYFTVNRLTESEKLEAAVLCLEGVALKWHYYENKLGSFSNWEDFRRLLLRRFLA

Query:  PKEGTLHERFFALKQESTVAEYREKFEEFAAAVDNLDGDSLEGKFVDGLVEDIKVEMRICMPVGL
         KE     +F  LKQ+ +V  YR +FE+   ++ +L  + LE KFV GL  DI++EMR+   +GL
Subjt:  PKEGTLHERFFALKQESTVAEYREKFEEFAAAVDNLDGDSLEGKFVDGLVEDIKVEMRICMPVGL

TrEMBL top hitse value%identityAlignment
A0A5C7HSW3 Chromo domain-containing protein4.3e-2933.99Show/hide
Query:  ENLEGRMLELSKEMAGMRQEISGIRGSISTEVEAAVSKSVGEAMKEGMQAILARIEGLKSTDQAVDNRKTKGKNIIGSEEVAAEVGEGSNTVLQSHLTKS
        +N++ RM  + + +  +R+++    G+I  E+  A++K     ++  MQ   AR+    S           GK   G E  +     G   +  +H ++ 
Subjt:  ENLEGRMLELSKEMAGMRQEISGIRGSISTEVEAAVSKSVGEAMKEGMQAILARIEGLKSTDQAVDNRKTKGKNIIGSEEVAAEVGEGSNTVLQSHLTKS

Query:  LAPVF----DLRLRKLEIPVFGGASPLEWLHQVERYFTVNRLTESEKLEAAVLCLEGVALKWHYYENKLGSFSNWEDFRRLLLRRFLAPKEGTLHERFFA
         + VF    D R RKLE+PVF G +P  W+ + ERYF++ R    EKLEA+V+  EG AL W+ +E+K      WE+ + L+L++F + +EG+LHE+F A
Subjt:  LAPVF----DLRLRKLEIPVFGGASPLEWLHQVERYFTVNRLTESEKLEAAVLCLEGVALKWHYYENKLGSFSNWEDFRRLLLRRFLAPKEGTLHERFFA

Query:  LKQESTVAEYREKFEEFAAAVDNLDGDSLEGKFVDGLVEDIKVEMRICMPVGL
        L+Q+ TV EYR KF EF A +DN+  +    +F++GL  +I+ E+R+  P+ L
Subjt:  LKQESTVAEYREKFEEFAAAVDNLDGDSLEGKFVDGLVEDIKVEMRICMPVGL

A0A7J6E9S0 Retrotrans_gag domain-containing protein4.3e-2943.45Show/hide
Query:  DLRLRKLEIPVFGGASPLEWLHQVERYFTVNRLTESEKLEAAVLCLEGVALKWHYYENKLGSFSNWEDFRRLLLRRFLAPKEGTLHERFFALKQESTVAE
        + R RK+E+PV+ G  P EW ++V+RYF + RL+ +E+LEAA++CLEG AL W  +EN      +WE+ + +L+ RF +  EG +++RFF+L+Q  TV +
Subjt:  DLRLRKLEIPVFGGASPLEWLHQVERYFTVNRLTESEKLEAAVLCLEGVALKWHYYENKLGSFSNWEDFRRLLLRRFLAPKEGTLHERFFALKQESTVAE

Query:  YREKFEEFAAAVDNLDGDSLEGKFVDGLVEDIKVEMRICMPVGLM
        YR KFE  AAA+  +    L+  FV+GL  DI+  +R+  P GL+
Subjt:  YREKFEEFAAAVDNLDGDSLEGKFVDGLVEDIKVEMRICMPVGLM

A0A7J6EPJ5 Uncharacterized protein1.5e-2945.83Show/hide
Query:  DLRLRKLEIPVFGGASPLEWLHQVERYFTVNRLTESEKLEAAVLCLEGVALKWHYYENKLGSFSNWEDFRRLLLRRFLAPKEGTLHERFFALKQESTVAE
        + R R +E+PVF G+ P +W  + ERYF + RLT  E+LEAA+LCLEG AL+W  +EN+      W + + LLLRRFL   EG++++RF AL+Q +TV E
Subjt:  DLRLRKLEIPVFGGASPLEWLHQVERYFTVNRLTESEKLEAAVLCLEGVALKWHYYENKLGSFSNWEDFRRLLLRRFLAPKEGTLHERFFALKQESTVAE

Query:  YREKFEEFAAAVDNLDGDSLEGKFVDGLVEDIKVEMRICMPVGL
        YR++FE  A ++  +    LE  F+ GL EDI+  +R+  P+GL
Subjt:  YREKFEEFAAAVDNLDGDSLEGKFVDGLVEDIKVEMRICMPVGL

A0A7J6FF68 Retrotrans_gag domain-containing protein4.3e-2943.45Show/hide
Query:  DLRLRKLEIPVFGGASPLEWLHQVERYFTVNRLTESEKLEAAVLCLEGVALKWHYYENKLGSFSNWEDFRRLLLRRFLAPKEGTLHERFFALKQESTVAE
        + R RK+E+PV+ G  P EW ++V+RYF + RL+ +E+LEAA++CLEG AL W  +EN      +WE+ + +L+ RF +  EG +++RFF+L+Q  TV +
Subjt:  DLRLRKLEIPVFGGASPLEWLHQVERYFTVNRLTESEKLEAAVLCLEGVALKWHYYENKLGSFSNWEDFRRLLLRRFLAPKEGTLHERFFALKQESTVAE

Query:  YREKFEEFAAAVDNLDGDSLEGKFVDGLVEDIKVEMRICMPVGLM
        YR KFE  AAA+  +    L+  FV+GL  DI+  +R+  P GL+
Subjt:  YREKFEEFAAAVDNLDGDSLEGKFVDGLVEDIKVEMRICMPVGLM

A0A7J6GB68 Retrotrans_gag domain-containing protein1.6e-2845.83Show/hide
Query:  DLRLRKLEIPVFGGASPLEWLHQVERYFTVNRLTESEKLEAAVLCLEGVALKWHYYENKLGSFSNWEDFRRLLLRRFLAPKEGTLHERFFALKQESTVAE
        + R R +E+P+F G+ P +W ++ ERYF + RLT  E+LEAAVLCLEG AL+W  +EN+     +W + + LLLRRFL   EG+ ++RF AL+Q STV E
Subjt:  DLRLRKLEIPVFGGASPLEWLHQVERYFTVNRLTESEKLEAAVLCLEGVALKWHYYENKLGSFSNWEDFRRLLLRRFLAPKEGTLHERFFALKQESTVAE

Query:  YREKFEEFAAAVDNLDGDSLEGKFVDGLVEDIKVEMRICMPVGL
        YR++FE   A++  +    LE  F+ GL  +I+  +R+  PVGL
Subjt:  YREKFEEFAAAVDNLDGDSLEGKFVDGLVEDIKVEMRICMPVGL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G67020.1 unknown protein6.5e-1445.95Show/hide
Query:  LRKLEIPVFGGASPLEWLHQVERYFTVNRLTESEKLEAAVLCLEGVALKWHYYENKLGSFSNWEDFRRLLLRRF
        +R++E+PVF G+   EW  +VER+F V R  +S+KL+   L LEGVALKW   E     F +W  F + LL RF
Subjt:  LRKLEIPVFGGASPLEWLHQVERYFTVNRLTESEKLEAAVLCLEGVALKWHYYENKLGSFSNWEDFRRLLLRRF

AT3G42723.1 aminoacyl-tRNA ligases;ATP binding;nucleotide binding7.5e-1028.12Show/hide
Query:  LHQVERYFTVNRLTESEKLEAAVLCLEGVALKWHYYENKLGSFSNWEDFRRLLLRRFLAPKEGTLHERFFALKQESTVAEYREKFEEFAAAVDNLDGDSL
        L   E YF  N + E E+L+     LEG   +W  +  K  S ++W++F+ ++ R      +      +  ++QE +V EYRE+FE        L G  L
Subjt:  LHQVERYFTVNRLTESEKLEAAVLCLEGVALKWHYYENKLGSFSNWEDFRRLLLRRFLAPKEGTLHERFFALKQESTVAEYREKFEEFAAAVDNLDGDSL

Query:  EGKFVDGLVEDIKVEMRICMPVGLMTLL
        E  F+ GL   ++  +R   P G++ ++
Subjt:  EGKFVDGLVEDIKVEMRICMPVGLMTLL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACAAGAATGGAAACACGAGTAGAGAATCTTGAAGGACGAATGTTGGAATTGAGCAAGGAAATGGCCGGAATGAGGCAAGAGATTTCGGGAATACGCGGATCTAT
TTCGACCGAAGTAGAAGCTGCGGTATCGAAGAGTGTGGGTGAGGCGATGAAGGAGGGAATGCAAGCCATCCTCGCCCGGATCGAAGGGTTGAAATCCACGGATCAGGCCG
TGGATAACAGGAAAACGAAAGGGAAGAACATTATCGGATCGGAGGAAGTGGCTGCCGAAGTAGGGGAGGGGAGTAACACGGTTTTACAATCACACCTGACCAAGTCTCTG
GCTCCGGTGTTCGATCTTCGTCTGCGGAAACTGGAAATACCAGTGTTTGGGGGAGCAAGTCCGTTGGAATGGTTACATCAAGTAGAACGGTACTTCACCGTCAACCGACT
GACGGAATCGGAGAAGCTGGAAGCGGCGGTACTGTGTCTCGAAGGCGTGGCGCTTAAGTGGCATTACTATGAGAACAAATTGGGTTCGTTCAGTAACTGGGAGGATTTCC
GTCGATTATTGTTACGGAGGTTTCTGGCGCCAAAAGAAGGTACGCTTCACGAACGATTCTTTGCTCTCAAGCAAGAATCTACTGTAGCTGAATATAGGGAGAAATTTGAG
GAATTTGCTGCTGCCGTAGATAACCTAGACGGCGATTCGTTGGAGGGGAAATTTGTTGATGGACTGGTTGAAGACATTAAGGTCGAGATGAGAATATGTATGCCTGTTGG
GCTAATGACACTCTTGGTACCCTTTTCCCCTGTCTTTATATCCTCTCTCTTCGGAAGGATGAGTTTGTTAGCTGTGTTTTGTTTGATCTCCCATCCCTCCTTCACAAATA
CCATTTCAGAAGACTCTTTCAGAACAATTATCCGCTTTGCCTCCTTTGATATATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGACAAGAATGGAAACACGAGTAGAGAATCTTGAAGGACGAATGTTGGAATTGAGCAAGGAAATGGCCGGAATGAGGCAAGAGATTTCGGGAATACGCGGATCTAT
TTCGACCGAAGTAGAAGCTGCGGTATCGAAGAGTGTGGGTGAGGCGATGAAGGAGGGAATGCAAGCCATCCTCGCCCGGATCGAAGGGTTGAAATCCACGGATCAGGCCG
TGGATAACAGGAAAACGAAAGGGAAGAACATTATCGGATCGGAGGAAGTGGCTGCCGAAGTAGGGGAGGGGAGTAACACGGTTTTACAATCACACCTGACCAAGTCTCTG
GCTCCGGTGTTCGATCTTCGTCTGCGGAAACTGGAAATACCAGTGTTTGGGGGAGCAAGTCCGTTGGAATGGTTACATCAAGTAGAACGGTACTTCACCGTCAACCGACT
GACGGAATCGGAGAAGCTGGAAGCGGCGGTACTGTGTCTCGAAGGCGTGGCGCTTAAGTGGCATTACTATGAGAACAAATTGGGTTCGTTCAGTAACTGGGAGGATTTCC
GTCGATTATTGTTACGGAGGTTTCTGGCGCCAAAAGAAGGTACGCTTCACGAACGATTCTTTGCTCTCAAGCAAGAATCTACTGTAGCTGAATATAGGGAGAAATTTGAG
GAATTTGCTGCTGCCGTAGATAACCTAGACGGCGATTCGTTGGAGGGGAAATTTGTTGATGGACTGGTTGAAGACATTAAGGTCGAGATGAGAATATGTATGCCTGTTGG
GCTAATGACACTCTTGGTACCCTTTTCCCCTGTCTTTATATCCTCTCTCTTCGGAAGGATGAGTTTGTTAGCTGTGTTTTGTTTGATCTCCCATCCCTCCTTCACAAATA
CCATTTCAGAAGACTCTTTCAGAACAATTATCCGCTTTGCCTCCTTTGATATATAA
Protein sequenceShow/hide protein sequence
MATRMETRVENLEGRMLELSKEMAGMRQEISGIRGSISTEVEAAVSKSVGEAMKEGMQAILARIEGLKSTDQAVDNRKTKGKNIIGSEEVAAEVGEGSNTVLQSHLTKSL
APVFDLRLRKLEIPVFGGASPLEWLHQVERYFTVNRLTESEKLEAAVLCLEGVALKWHYYENKLGSFSNWEDFRRLLLRRFLAPKEGTLHERFFALKQESTVAEYREKFE
EFAAAVDNLDGDSLEGKFVDGLVEDIKVEMRICMPVGLMTLLVPFSPVFISSLFGRMSLLAVFCLISHPSFTNTISEDSFRTIIRFASFDI