; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0008574 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0008574
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr9:25612931..25614777
RNA-Seq ExpressionLag0008574
SyntenyLag0008574
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_013630059.1 PREDICTED: uncharacterized protein LOC106335920 isoform X5 [Brassica oleracea var. oleracea]5.6e-2036.65Show/hide
Query:  TKPEKELDKLLEEEEIYWKLRSREDWLNWGDRNTR----EEATKMVLNGIVAKVTEKH--NRMLDRNFSKVDIEEAINSMNPRKASSPDGAHALFYQ---
        T+ E  L   LEEE  YW+ +SR  WL  GDRNTR    +   +   N I+    E+   N  L +  +  +IE+A +++NP K+  PDG +A F++   
Subjt:  TKPEKELDKLLEEEEIYWKLRSREDWLNWGDRNTR----EEATKMVLNGIVAKVTEKH--NRMLDRNFSKVDIEEAINSMNPRKASSPDGAHALFYQ---

Query:  ---KRVMEKMGFSR---KWIMNCIQSVEYSVLINDIPQEEFRPSRDDSLIFFKATEEEGSRIKEMLRTYEEASGKKINMDKSLCMFSRNVG
           K+VM++MGF     KWI  C+ +V +SVL+N  P +   P+R    +F +ATEEE   +   LR Y+ ASG+ +N +KS   F++  G
Subjt:  ---KRVMEKMGFSR---KWIMNCIQSVEYSVLINDIPQEEFRPSRDDSLIFFKATEEEGSRIKEMLRTYEEASGKKINMDKSLCMFSRNVG

XP_018834507.1 uncharacterized protein LOC109001610 [Juglans regia]6.6e-2124.87Show/hide
Query:  WKRSRLKGSIKNVIVRKEEKIKALASSLNVVPEAILTKPEKELDKLLEEEEIYWKLRSREDWLNWGDRNTR-----------------------------
        W ++ L GS    +  K +++ AL  +     +  +   +KE+D+LL+E++I+WK R+++ WL  GDRNT+                             
Subjt:  WKRSRLKGSIKNVIVRKEEKIKALASSLNVVPEAILTKPEKELDKLLEEEEIYWKLRSREDWLNWGDRNTR-----------------------------

Query:  -------------------EEATKMVLNGIVAKVTEKHNRMLDRNFSKVDIEEAINSMNPRKASSPDGAHALFYQ-------------------------
                            E     L+ +  KVTE+ N  L R ++K +++ A+ SMNP  +  PDG    FYQ                         
Subjt:  -------------------EEATKMVLNGIVAKVTEKHNRMLDRNFSKVDIEEAINSMNPRKASSPDGAHALFYQ-------------------------

Query:  ------------------KRVMEKMGFSRKWI---MNCIQSVEYSVLINDIPQEEFRPSR----------------------------------------
                          + VM KMGF+++WI   MNC++SV YS+L+N  PQ+ F+P+R                                        
Subjt:  ------------------KRVMEKMGFSRKWI---MNCIQSVEYSVLINDIPQEEFRPSR----------------------------------------

Query:  -----------DDSLIFFKATEEEGSRIKEMLRTYEEASGKKINMDKSLCMFSRNVGDDKAKAIVDLMRIKISKSIGYYLGLPAQSGKRK
                   DDSL+F KA   E SR+  +L  YE ASG+ +N +K+   FSRN   +  + I+ +  ++ ++    YLGLPA  G+ +
Subjt:  -----------DDSLIFFKATEEEGSRIKEMLRTYEEASGKKINMDKSLCMFSRNVGDDKAKAIVDLMRIKISKSIGYYLGLPAQSGKRK

XP_023902041.1 uncharacterized protein LOC112013897 [Quercus suber]1.6e-2227.95Show/hide
Query:  GSIKNVIVRKEEKIKALA-SSLNVVPEAILTKPEKELDKLLEEEEIYWKLRSREDWLNWGDRNTREEATKM-----------------------------
        G+I   I  K+E + AL  S  N      +    KE+++LL+ EEI W+ RSR  WL  GDRNT+   TK                              
Subjt:  GSIKNVIVRKEEKIKALA-SSLNVVPEAILTKPEKELDKLLEEEEIYWKLRSREDWLNWGDRNTREEATKM-----------------------------

Query:  -------------------VLNGIVAKVTEKHNRMLDRNFSKVDIEEAINSMNPRKASSPDGAHALFYQ-----------------------------KR
                           VL+ I  KVTE+ N  L + F++ +IE A+N M+P KA   D    + Y                              K+
Subjt:  -------------------VLNGIVAKVTEKHNRMLDRNFSKVDIEEAINSMNPRKASSPDGAHALFYQ-----------------------------KR

Query:  VMEKMGFSRKWI---MNCIQSVEYSVLINDIPQEEFRPSR---------------------------------------------------DDSLIFFKA
        VMEKMGF  KWI   M+CI SV YS+L+N        P+R                                                   DD+L+F KA
Subjt:  VMEKMGFSRKWI---MNCIQSVEYSVLINDIPQEEFRPSR---------------------------------------------------DDSLIFFKA

Query:  TEEEGSRIKEMLRTYEEASGKKINMDKSLCMFSRNVGDDKAKAIVDLMRIKISKSIGYYLGLPAQSGKRKAIMSKRLRERSGRCCKGEKE
          +E   + ++L+ YE+ASG+KIN+DKS   FS N  D+K   ++ ++          YLGLP+  GK K  +   ++ER  R   G KE
Subjt:  TEEEGSRIKEMLRTYEEASGKKINMDKSLCMFSRNVGDDKAKAIVDLMRIKISKSIGYYLGLPAQSGKRKAIMSKRLRERSGRCCKGEKE

XP_023914218.1 uncharacterized protein LOC112025766 [Quercus suber]9.6e-2027.37Show/hide
Query:  KWKRSRLKGSIKNVIVRKEEKIKALA-----SSLNVVPEAILTKPEKELDKLLEEEEIYWKLRSREDWLNWGDRNT----------REEAT---------
        KW  S++ G I   I  K   +  L       SL+     +     +E++ LL++EEIYW  R++  WL   D+NT          R++ T         
Subjt:  KWKRSRLKGSIKNVIVRKEEKIKALA-----SSLNVVPEAILTKPEKELDKLLEEEEIYWKLRSREDWLNWGDRNT----------REEAT---------

Query:  -----------------------------KMVLNGIVAKVTEKHNRMLDRNFSKVDIEEAINSMNPRKASSPDGAHALF---------------------
                                       V + I  +VTE+ N  L+R+F++  +  A+  ++P KA  PD   + F                     
Subjt:  -----------------------------KMVLNGIVAKVTEKHNRMLDRNFSKVDIEEAINSMNPRKASSPDGAHALF---------------------

Query:  --------------------------YQKRVMEKMGFSRKW---IMNCIQSVEYSVLINDIPQEEFRPSR--------------DDSLIFFKATEEEGSR
                                  + K VMEK+GFS+KW   IM CI SV YSVLIN +      P+R              DDS++F KA+ EE   
Subjt:  --------------------------YQKRVMEKMGFSRKW---IMNCIQSVEYSVLINDIPQEEFRPSR--------------DDSLIFFKATEEEGSR

Query:  IKEMLRTYEEASGKKINMDKSLCMFSRNVGDDKAKAIVDLMRIKISKSIGYYLGLPAQSGKRKAIMSKRLRERSGRCCKGEKEAYFPLVAK
        +K +L+ YE ASG+KIN DKSL  FS N   +  + I+  +          YLGLP+  G+ K  +   L+ER G+   G K     L  K
Subjt:  IKEMLRTYEEASGKKINMDKSLCMFSRNVGDDKAKAIVDLMRIKISKSIGYYLGLPAQSGKRKAIMSKRLRERSGRCCKGEKEAYFPLVAK

XP_024038356.1 uncharacterized protein LOC112097383 [Citrus clementina]1.5e-2034.78Show/hide
Query:  EKELDKLLEEEEIYWKLRSREDWLNWGDRNTREEATKM--VLNGIVAKVTEKHNRMLDRNFSKVDIEEAINSMNPRKASSPDGAHALFYQKRVMEKMGFS
        E+ +  L  +EEIYW+ RSR +WL  GD+NT      +   L  +   VT + N+ LD  F++ +I   ++ M+  KA  PDG  A FYQK         
Subjt:  EKELDKLLEEEEIYWKLRSREDWLNWGDRNTREEATKM--VLNGIVAKVTEKHNRMLDRNFSKVDIEEAINSMNPRKASSPDGAHALFYQKRVMEKMGFS

Query:  RKWIMNCIQSVEYSVLINDIPQEEFRPSRDDSLIFFKATEEEGSRIKEMLRTYEEASGKKINMDKSLCMFSRNVGDDKAKAIVDLMRIKISKSIGYYLGL
        +K     IQ +++S    D+         DDSLIF KAT E+   +K++   YE+ASG   NM+KS   FS +   D+   I  + ++K+      YLGL
Subjt:  RKWIMNCIQSVEYSVLINDIPQEEFRPSRDDSLIFFKATEEEGSRIKEMLRTYEEASGKKINMDKSLCMFSRNVGDDKAKAIVDLMRIKISKSIGYYLGL

Query:  PAQSGKR
        P+  G+R
Subjt:  PAQSGKR

TrEMBL top hitse value%identityAlignment
A0A2I4FS81 uncharacterized protein LOC1090016103.2e-2124.87Show/hide
Query:  WKRSRLKGSIKNVIVRKEEKIKALASSLNVVPEAILTKPEKELDKLLEEEEIYWKLRSREDWLNWGDRNTR-----------------------------
        W ++ L GS    +  K +++ AL  +     +  +   +KE+D+LL+E++I+WK R+++ WL  GDRNT+                             
Subjt:  WKRSRLKGSIKNVIVRKEEKIKALASSLNVVPEAILTKPEKELDKLLEEEEIYWKLRSREDWLNWGDRNTR-----------------------------

Query:  -------------------EEATKMVLNGIVAKVTEKHNRMLDRNFSKVDIEEAINSMNPRKASSPDGAHALFYQ-------------------------
                            E     L+ +  KVTE+ N  L R ++K +++ A+ SMNP  +  PDG    FYQ                         
Subjt:  -------------------EEATKMVLNGIVAKVTEKHNRMLDRNFSKVDIEEAINSMNPRKASSPDGAHALFYQ-------------------------

Query:  ------------------KRVMEKMGFSRKWI---MNCIQSVEYSVLINDIPQEEFRPSR----------------------------------------
                          + VM KMGF+++WI   MNC++SV YS+L+N  PQ+ F+P+R                                        
Subjt:  ------------------KRVMEKMGFSRKWI---MNCIQSVEYSVLINDIPQEEFRPSR----------------------------------------

Query:  -----------DDSLIFFKATEEEGSRIKEMLRTYEEASGKKINMDKSLCMFSRNVGDDKAKAIVDLMRIKISKSIGYYLGLPAQSGKRK
                   DDSL+F KA   E SR+  +L  YE ASG+ +N +K+   FSRN   +  + I+ +  ++ ++    YLGLPA  G+ +
Subjt:  -----------DDSLIFFKATEEEGSRIKEMLRTYEEASGKKINMDKSLCMFSRNVGDDKAKAIVDLMRIKISKSIGYYLGLPAQSGKRK

A0A2N9EJV7 Uncharacterized protein8.4e-2227.27Show/hide
Query:  KWKRSRLKGSIKNVIVRKEEKIK--ALASSLNVVPEAILTKPEKELDKLLEEEEIYWKLRSREDWLNWGDRNTRE-------------------EATKMV
        +W R +  G+I  ++  K EK+K   L SSL    + +L+    E+++LL +EE  W+ RSR+ WL  GDRNT+                    E    V
Subjt:  KWKRSRLKGSIKNVIVRKEEKIK--ALASSLNVVPEAILTKPEKELDKLLEEEEIYWKLRSREDWLNWGDRNTRE-------------------EATKMV

Query:  LNGIVAKVTEKHNRMLDRNFSKVDIEEAINSMNPRKASSPDGAHALF-----------------------------------------------YQKRVM
        L+G+   VTE+ N+ L   F++ ++  A+  M P KA  PD + + F                                               + K+VM
Subjt:  LNGIVAKVTEKHNRMLDRNFSKVDIEEAINSMNPRKASSPDGAHALF-----------------------------------------------YQKRVM

Query:  EKMGFSRKW---IMNCIQSVEYSVLINDIPQEEFRPSR---------------------------------------------------DDSLIFFKATE
         +MGF  KW   IM CI +V YS+LIN  P     PSR                                                   DDSL+F +A+ 
Subjt:  EKMGFSRKW---IMNCIQSVEYSVLINDIPQEEFRPSR---------------------------------------------------DDSLIFFKATE

Query:  EEGSRIKEMLRTYEEASGKKINMDKSLCMFSRNVGDDKAKAIVDLMRIKISKSIGYYLGLPAQSGKRKAIMSKRLRERSGRCCKGEKEAYFPLVAK
         E  +I+E+L TYE+ASG+++N  K+   FSRN      + I D++ +   +    YLGLP+  GK K     +++ER     KG KE     V +
Subjt:  EEGSRIKEMLRTYEEASGKKINMDKSLCMFSRNVGDDKAKAIVDLMRIKISKSIGYYLGLPAQSGKRKAIMSKRLRERSGRCCKGEKEAYFPLVAK

A0A2N9GW00 Uncharacterized protein2.9e-2229.87Show/hide
Query:  LTKPEKELDKLLEEEEIYWKLRSREDWLNWGDRNTREEAT-------------------------KMVLNGIVAKVTEKHNRMLDRNFSKVDIEEAINSM
        LT+  +E+++LL +EE  WK RSR+ WL    + T E  T                          +VL+GI   VT + N+ L   F++ ++  A+  M
Subjt:  LTKPEKELDKLLEEEEIYWKLRSREDWLNWGDRNTREEAT-------------------------KMVLNGIVAKVTEKHNRMLDRNFSKVDIEEAINSM

Query:  NPRKASSPDGAHALFYQ--------------------------------------------KRVMEKMGFSRKW---IMNCIQSVEYSVLINDIPQEEFR
         P KA  PDG  ++FYQ                                            K+VM +MGF  +W   IM CI  V YS+LIN  P     
Subjt:  NPRKASSPDGAHALFYQ--------------------------------------------KRVMEKMGFSRKW---IMNCIQSVEYSVLINDIPQEEFR

Query:  PSR----DDSLIFFKATEEEGSRIKEMLRTYEEASGKKINMDKSLCMFSRNVGDDKAKAIVDLMRIKISKSIGYYLGLPAQSGKRKAIMSKRLRERSGRC
        P+R    DDSL+F +A+  +  +I+E+L  YE+ASG+++N  K+   F RN      + I D++ +   +    YLGLP+  GK K     +++ER    
Subjt:  PSR----DDSLIFFKATEEEGSRIKEMLRTYEEASGKKINMDKSLCMFSRNVGDDKAKAIVDLMRIKISKSIGYYLGLPAQSGKRKAIMSKRLRERSGRC

Query:  CKGEKEAY
         KG KE +
Subjt:  CKGEKEAY

A0A2N9GYK3 Uncharacterized protein2.4e-2426.88Show/hide
Query:  KWKRSRLKGSIKNVIVRKEEKIKALAS-SLNVVPEAILTKPEKELDKLLEEEEIYWKLRSREDWLNWGDRNTR---------------------------
        +W R    G+IK  I   +++IK   S ++     A +    KEL+ LL +EE +W+ RSR  WL  GDRNT+                           
Subjt:  KWKRSRLKGSIKNVIVRKEEKIKALAS-SLNVVPEAILTKPEKELDKLLEEEEIYWKLRSREDWLNWGDRNTR---------------------------

Query:  --EEATKMVL-------------------NGIVAKVTEKHNRMLDRNFSKVDIEEAINSMNPRKASSPDG-------------AHALFYQK---------
          EE  ++++                   + +   VT + N  L R F   ++E+AI  M P KA  PDG              H + + K         
Subjt:  --EEATKMVL-------------------NGIVAKVTEKHNRMLDRNFSKVDIEEAINSMNPRKASSPDG-------------AHALFYQK---------

Query:  -----------------RVMEKMGFSRKWI---MNCIQSVEYSVLINDIPQEEFRPSR------------------DDSLIFFKATEEEGSRIKEMLRTY
                         ++M+KMGF +KWI     CI SV YS+LIN  P     PSR                  DDSL+F KAT     +I+ ML  Y
Subjt:  -----------------RVMEKMGFSRKWI---MNCIQSVEYSVLINDIPQEEFRPSR------------------DDSLIFFKATEEEGSRIKEMLRTY

Query:  EEASGKKINMDKSLCMFSRNVGDDKAKAIVDLMRIKISKSIGYYLGLPAQSGKRKAIMSKRLRERSGRCCKGEKEAYFPLVAKRPFERIV-----GSSSD
        E+ASG+++N DK+   FS+ V      AI + + + + +    YLGLP+  G+++A    +++ER     KG KE       +   E ++      ++SD
Subjt:  EEASGKKINMDKSLCMFSRNVGDDKAKAIVDLMRIKISKSIGYYLGLPAQSGKRKAIMSKRLRERSGRCCKGEKEAYFPLVAKRPFERIV-----GSSSD

Query:  R------NWKEKC
        +      +W++ C
Subjt:  R------NWKEKC

A0A2N9HZ12 Uncharacterized protein2.7e-2028.43Show/hide
Query:  KWKRSRLKGSIKNVIVRKEEKIKALASSLNVVPEAILTKPEKELDKLLEEEEIYWKLRSREDWLNWGDRNTR------------------EEATKMVLNG
        KW +       + +  ++++ + A  +++       L + + E++ LLE+EE  W+ RSR  WL  GDRNT                   EEA   V + 
Subjt:  KWKRSRLKGSIKNVIVRKEEKIKALASSLNVVPEAILTKPEKELDKLLEEEEIYWKLRSREDWLNWGDRNTR------------------EEATKMVLNG

Query:  IVAKVTEKHNRMLDRNFSKVDIEEAINSMNPRKASSPDGAHALFYQKRVMEKMGFSRKWIMNCIQSVEYSVLIN------DI---------PQEEFRPSR
        I + +    N  L R ++++++EEA+  M P KA  PDG   LFYQ+          + +++C+ S  +  LI+      D+         P+       
Subjt:  IVAKVTEKHNRMLDRNFSKVDIEEAINSMNPRKASSPDGAHALFYQKRVMEKMGFSRKWIMNCIQSVEYSVLIN------DI---------PQEEFRPSR

Query:  DDSLIFFKATEEEGSRIKEMLRTYEEASGKKINMDKSLCMFSRNVGDDKAKAIVDLMRIKISKSIGYYLGLPAQSGKRKAIMSKRLRERSGRCCKGEKE
        DDSL+F KAT ++ ++++E+L  YE A G+++N DK+   FS+       + I D + + I K    YLGLP+  GK +     +L+ER      G KE
Subjt:  DDSLIFFKATEEEGSRIKEMLRTYEEASGKKINMDKSLCMFSRNVGDDKAKAIVDLMRIKISKSIGYYLGLPAQSGKRKAIMSKRLRERSGRCCKGEKE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATGGAAAAGATCTAGACTAAAAGGCTCAATTAAAAATGTCATTGTCCGCAAAGAGGAAAAGATAAAAGCTCTTGCTAGCTCCCTAAATGTGGTCCCCGAGGCAAT
TCTTACAAAGCCAGAAAAGGAGCTTGACAAGCTCCTTGAAGAAGAAGAAATTTACTGGAAGCTCCGCTCAAGAGAGGATTGGTTGAATTGGGGCGATAGGAATACTAGGG
AGGAAGCCACTAAGATGGTTTTGAATGGTATTGTTGCAAAAGTCACAGAGAAGCACAACAGAATGCTAGACAGAAATTTTAGTAAGGTCGATATTGAGGAGGCAATCAAT
TCGATGAACCCTAGGAAGGCCTCGAGCCCTGATGGGGCTCATGCTCTCTTTTACCAGAAGAGAGTCATGGAAAAGATGGGGTTCTCTAGGAAATGGATCATGAATTGTAT
CCAGTCGGTGGAGTATTCGGTTCTAATCAACGACATTCCCCAGGAAGAGTTCAGGCCATCTAGAGATGATAGCCTCATTTTCTTCAAGGCTACAGAAGAAGAAGGCTCAA
GAATAAAGGAGATGCTGAGAACTTACGAGGAAGCTTCAGGGAAAAAGATTAATATGGATAAATCTTTGTGTATGTTTAGCAGGAACGTAGGGGATGACAAAGCAAAGGCC
ATAGTTGATTTGATGAGAATAAAGATCTCAAAGTCTATTGGGTACTATCTTGGCCTCCCAGCCCAATCGGGTAAAAGGAAAGCGATTATGTCCAAAAGATTGAGAGAGAG
GTCTGGAAGGTGCTGCAAGGGTGAAAAGGAAGCTTATTTTCCCTTGGTGGCAAAAAGGCCTTTTGAACGGATTGTGGGATCCTCTAGTGATAGGAATTGGAAGGAAAAAT
GCTTGAACTTCAAGCTTTATGGAGTTATGAACATATGA
mRNA sequenceShow/hide mRNA sequence
ATGAAATGGAAAAGATCTAGACTAAAAGGCTCAATTAAAAATGTCATTGTCCGCAAAGAGGAAAAGATAAAAGCTCTTGCTAGCTCCCTAAATGTGGTCCCCGAGGCAAT
TCTTACAAAGCCAGAAAAGGAGCTTGACAAGCTCCTTGAAGAAGAAGAAATTTACTGGAAGCTCCGCTCAAGAGAGGATTGGTTGAATTGGGGCGATAGGAATACTAGGG
AGGAAGCCACTAAGATGGTTTTGAATGGTATTGTTGCAAAAGTCACAGAGAAGCACAACAGAATGCTAGACAGAAATTTTAGTAAGGTCGATATTGAGGAGGCAATCAAT
TCGATGAACCCTAGGAAGGCCTCGAGCCCTGATGGGGCTCATGCTCTCTTTTACCAGAAGAGAGTCATGGAAAAGATGGGGTTCTCTAGGAAATGGATCATGAATTGTAT
CCAGTCGGTGGAGTATTCGGTTCTAATCAACGACATTCCCCAGGAAGAGTTCAGGCCATCTAGAGATGATAGCCTCATTTTCTTCAAGGCTACAGAAGAAGAAGGCTCAA
GAATAAAGGAGATGCTGAGAACTTACGAGGAAGCTTCAGGGAAAAAGATTAATATGGATAAATCTTTGTGTATGTTTAGCAGGAACGTAGGGGATGACAAAGCAAAGGCC
ATAGTTGATTTGATGAGAATAAAGATCTCAAAGTCTATTGGGTACTATCTTGGCCTCCCAGCCCAATCGGGTAAAAGGAAAGCGATTATGTCCAAAAGATTGAGAGAGAG
GTCTGGAAGGTGCTGCAAGGGTGAAAAGGAAGCTTATTTTCCCTTGGTGGCAAAAAGGCCTTTTGAACGGATTGTGGGATCCTCTAGTGATAGGAATTGGAAGGAAAAAT
GCTTGAACTTCAAGCTTTATGGAGTTATGAACATATGA
Protein sequenceShow/hide protein sequence
MKWKRSRLKGSIKNVIVRKEEKIKALASSLNVVPEAILTKPEKELDKLLEEEEIYWKLRSREDWLNWGDRNTREEATKMVLNGIVAKVTEKHNRMLDRNFSKVDIEEAIN
SMNPRKASSPDGAHALFYQKRVMEKMGFSRKWIMNCIQSVEYSVLINDIPQEEFRPSRDDSLIFFKATEEEGSRIKEMLRTYEEASGKKINMDKSLCMFSRNVGDDKAKA
IVDLMRIKISKSIGYYLGLPAQSGKRKAIMSKRLRERSGRCCKGEKEAYFPLVAKRPFERIVGSSSDRNWKEKCLNFKLYGVMNI