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Lag0008575 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0008575
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H-like superfamily protein
Genome locationchr9:25616495..25617019
RNA-Seq ExpressionLag0008575
SyntenyLag0008575
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_006491472.1 uncharacterized protein LOC102626455 [Citrus sinensis]5.3e-3141.82Show/hide
Query:  MGFWDIATFNKALLTKQCWRLVKFPESLMAKVMKGRYYQDGNFLKAKEGRNPSIIWRSILWGRSLFEEGYRWKIGDCSRILVDQDPWISSKSARISINVK
        +GF D+ +FN+AL+ KQ WRLV++P SLMA+VMK RYY++  F  AK G NPS IWRSILWG  + ++G RW+IGD  ++LV +D WI   +    I+ K
Subjt:  MGFWDIATFNKALLTKQCWRLVKFPESLMAKVMKGRYYQDGNFLKAKEGRNPSIIWRSILWGRSLFEEGYRWKIGDCSRILVDQDPWISSKSARISINVK

Query:  KDFKSKRVNVLINEDGSQKESLIREAFNPIEAEEILNMPRCKSKAKDEIIWNEDPKGQFPVRSAY
               V  LI+ +   +   + + F   + E IL +     K +DE++W+ D KG++ V+S Y
Subjt:  KDFKSKRVNVLINEDGSQKESLIREAFNPIEAEEILNMPRCKSKAKDEIIWNEDPKGQFPVRSAY

XP_015388020.1 uncharacterized protein LOC107177951 [Citrus sinensis]1.2e-3038.82Show/hide
Query:  MGFWDIATFNKALLTKQCWRLVKFPESLMAKVMKGRYYQDGNFLKAKEGRNPSIIWRSILWGRSLFEEGYRWKIGDCSRILVDQDPWISSKSARISINVK
        +GF D+++FN+AL+ KQ WR+++ PESL+A+VMK +Y++   F++A+ G NPS IWRSILWGR +  +G RW+I D   + V Q  W+        I+  
Subjt:  MGFWDIATFNKALLTKQCWRLVKFPESLMAKVMKGRYYQDGNFLKAKEGRNPSIIWRSILWGRSLFEEGYRWKIGDCSRILVDQDPWISSKSARISINVK

Query:  KDFKSKRVNVLINEDGSQKESLIREAFNPIEAEEILNMPRCKSKAKDEIIWNEDPKGQFPVRSAYCCLLE
               V+VLI+ED   ++  IR+ F+  +A +IL +P  +  + D+++W+ D KG + V+S Y   L+
Subjt:  KDFKSKRVNVLINEDGSQKESLIREAFNPIEAEEILNMPRCKSKAKDEIIWNEDPKGQFPVRSAYCCLLE

XP_022150918.1 uncharacterized protein LOC111018954 [Momordica charantia]7.3e-3340.36Show/hide
Query:  MGFWDIATFNKALLTKQCWRLVKFPESLMAKVMKGRYYQDGNFLKAKEGRNPSIIWRSILWGRSLFEEGYRWKIGDCSRILVDQDPWISSK-SARISINV
        MGF D+  FNKALL KQCWR++  P S++++V+KGRY++D +F++AK   NPS IWRSILWGR L ++G RW+IG+   + +  D W+ ++ + +I  + 
Subjt:  MGFWDIATFNKALLTKQCWRLVKFPESLMAKVMKGRYYQDGNFLKAKEGRNPSIIWRSILWGRSLFEEGYRWKIGDCSRILVDQDPWISSK-SARISINV

Query:  KKDFKSKRVNVLINEDGSQKESLIREAFNPIEAEEILNMPRCKSKAKDEIIWNEDPKGQFPVRSAY
        +    S+  +++ +E+G  +  ++R+ F P EA+ IL++P  +   +D +IWN +  G + VRS Y
Subjt:  KKDFKSKRVNVLINEDGSQKESLIREAFNPIEAEEILNMPRCKSKAKDEIIWNEDPKGQFPVRSAY

XP_022155286.1 uncharacterized protein LOC111022423 [Momordica charantia]1.6e-3244.24Show/hide
Query:  MGFWDIATFNKALLTKQCWRLVKFPESLMAKVMKGRYYQDGNFLKAKEGRNPSIIWRSILWGRSLFEEGYRWKIGDCSRILVDQDPWISSKSARISINVK
        MGF DI+ FN+A+L KQ WR+++ P+SL+AK ++G+Y++ G+FL+AK G  PS  WRSILWGR LF++GYRWK+G+   I +  DPW+        +   
Subjt:  MGFWDIATFNKALLTKQCWRLVKFPESLMAKVMKGRYYQDGNFLKAKEGRNPSIIWRSILWGRSLFEEGYRWKIGDCSRILVDQDPWISSKSARISINVK

Query:  KDFKSKRVNVLINEDGSQKESLIREAFNPIEAEEILNMPRCKSKAKDEIIWNEDPKGQFPVRSAY
           ++  V  L+   G   E  +RE+F   EA+ IL  P       DEIIW  D  G F VRSAY
Subjt:  KDFKSKRVNVLINEDGSQKESLIREAFNPIEAEEILNMPRCKSKAKDEIIWNEDPKGQFPVRSAY

XP_024038343.1 uncharacterized protein LOC112097373 [Citrus clementina]8.1e-3241.82Show/hide
Query:  MGFWDIATFNKALLTKQCWRLVKFPESLMAKVMKGRYYQDGNFLKAKEGRNPSIIWRSILWGRSLFEEGYRWKIGDCSRILVDQDPWISSKSARISINVK
        MGF D  +FN+AL+ KQ WR+++FP+SL+AK+++ RY+Q  +F+ A+ G NPS IWRSILWGR +  +G +W+IG+   I++ ++ W+        I+  
Subjt:  MGFWDIATFNKALLTKQCWRLVKFPESLMAKVMKGRYYQDGNFLKAKEGRNPSIIWRSILWGRSLFEEGYRWKIGDCSRILVDQDPWISSKSARISINVK

Query:  KDFKSKRVNVLINEDGSQKESLIREAFNPIEAEEILNMPRCKSKAKDEIIWNEDPKGQFPVRSAY
               V  LINED +  E LI   F  I+AE I+ +   +   KDE+IW+ D KGQ+ V+S Y
Subjt:  KDFKSKRVNVLINEDGSQKESLIREAFNPIEAEEILNMPRCKSKAKDEIIWNEDPKGQFPVRSAY

TrEMBL top hitse value%identityAlignment
A0A1S8ACU2 Ribonuclease H-like superfamily protein4.3e-3141.82Show/hide
Query:  MGFWDIATFNKALLTKQCWRLVKFPESLMAKVMKGRYYQDGNFLKAKEGRNPSIIWRSILWGRSLFEEGYRWKIGDCSRILVDQDPWISSKSARISINVK
        +GF DI +FN+AL+ KQ WR++K+PESLMAK+++ +Y++  +FL+AK G  PS +WRSI+WGR +   G RW+IG   R+ + +  WI    A   I+  
Subjt:  MGFWDIATFNKALLTKQCWRLVKFPESLMAKVMKGRYYQDGNFLKAKEGRNPSIIWRSILWGRSLFEEGYRWKIGDCSRILVDQDPWISSKSARISINVK

Query:  KDFKSKRVNVLINEDGSQKESLIREAFNPIEAEEILNMPRCKSKAKDEIIWNEDPKGQFPVRSAY
               V  LI+E+   KESLI++ FN  +AE I  +    S   D+I+W+ D KG + V+S Y
Subjt:  KDFKSKRVNVLINEDGSQKESLIREAFNPIEAEEILNMPRCKSKAKDEIIWNEDPKGQFPVRSAY

A0A2I0A354 Ribonuclease H protein6.9e-2940.96Show/hide
Query:  MGFWDIATFNKALLTKQCWRLVKFPESLMAKVMKGRYYQDGNFLKAKEGRNPSIIWRSILWGRSLFEEGYRWKIGDCSRILVDQDPWISSK-SARISINV
        MGF +++ FNKALL KQ WR++    SLMA+V+K +Y+ + +FL A+   N S IWRSILWGR L + G RW+IG+ + + V  DPW+    S +   + 
Subjt:  MGFWDIATFNKALLTKQCWRLVKFPESLMAKVMKGRYYQDGNFLKAKEGRNPSIIWRSILWGRSLFEEGYRWKIGDCSRILVDQDPWISSK-SARISINV

Query:  KKDFKSKRVNVLINEDGSQKESLIREAFNPIEAEEILNMPRCKSKAKDEIIWNEDPKGQFPVRSAY
          +  + R+  L+ EDGS     I      I+   IL MP C +K  D +IW+ D KG + V+S Y
Subjt:  KKDFKSKRVNVLINEDGSQKESLIREAFNPIEAEEILNMPRCKSKAKDEIIWNEDPKGQFPVRSAY

A0A6J1DAR4 uncharacterized protein LOC1110189543.6e-3340.36Show/hide
Query:  MGFWDIATFNKALLTKQCWRLVKFPESLMAKVMKGRYYQDGNFLKAKEGRNPSIIWRSILWGRSLFEEGYRWKIGDCSRILVDQDPWISSK-SARISINV
        MGF D+  FNKALL KQCWR++  P S++++V+KGRY++D +F++AK   NPS IWRSILWGR L ++G RW+IG+   + +  D W+ ++ + +I  + 
Subjt:  MGFWDIATFNKALLTKQCWRLVKFPESLMAKVMKGRYYQDGNFLKAKEGRNPSIIWRSILWGRSLFEEGYRWKIGDCSRILVDQDPWISSK-SARISINV

Query:  KKDFKSKRVNVLINEDGSQKESLIREAFNPIEAEEILNMPRCKSKAKDEIIWNEDPKGQFPVRSAY
        +    S+  +++ +E+G  +  ++R+ F P EA+ IL++P  +   +D +IWN +  G + VRS Y
Subjt:  KKDFKSKRVNVLINEDGSQKESLIREAFNPIEAEEILNMPRCKSKAKDEIIWNEDPKGQFPVRSAY

A0A6J1DRA0 uncharacterized protein LOC1110224237.9e-3344.24Show/hide
Query:  MGFWDIATFNKALLTKQCWRLVKFPESLMAKVMKGRYYQDGNFLKAKEGRNPSIIWRSILWGRSLFEEGYRWKIGDCSRILVDQDPWISSKSARISINVK
        MGF DI+ FN+A+L KQ WR+++ P+SL+AK ++G+Y++ G+FL+AK G  PS  WRSILWGR LF++GYRWK+G+   I +  DPW+        +   
Subjt:  MGFWDIATFNKALLTKQCWRLVKFPESLMAKVMKGRYYQDGNFLKAKEGRNPSIIWRSILWGRSLFEEGYRWKIGDCSRILVDQDPWISSKSARISINVK

Query:  KDFKSKRVNVLINEDGSQKESLIREAFNPIEAEEILNMPRCKSKAKDEIIWNEDPKGQFPVRSAY
           ++  V  L+   G   E  +RE+F   EA+ IL  P       DEIIW  D  G F VRSAY
Subjt:  KDFKSKRVNVLINEDGSQKESLIREAFNPIEAEEILNMPRCKSKAKDEIIWNEDPKGQFPVRSAY

A0A803PM68 Uncharacterized protein1.8e-2937.95Show/hide
Query:  MGFWDIATFNKALLTKQCWRLVKFPESLMAKVMKGRYYQDGNFLKAKEGRNPSIIWRSILWGRSLFEEGYRWKIGDCSRILVDQDPWISSKSARISINVK
        +GF D+  FN+ALL KQ WR +++P SL +KV+K  Y+ +   L+AK G + S +WRS++WG+ + ++GYRW+IG+ + + V +DPW+  +     +  K
Subjt:  MGFWDIATFNKALLTKQCWRLVKFPESLMAKVMKGRYYQDGNFLKAKEGRNPSIIWRSILWGRSLFEEGYRWKIGDCSRILVDQDPWISSKSARISINVK

Query:  KDF-KSKRVNVLINEDGSQKESLIREAFNPIEAEEILNMPRCKSKAKDEIIWNEDPKGQFPVRSAY
            +   V  L+  +G   E  IR  FNP +AE IL MP  + + +D+I+W+    G++ VRS Y
Subjt:  KDF-KSKRVNVLINEDGSQKESLIREAFNPIEAEEILNMPRCKSKAKDEIIWNEDPKGQFPVRSAY

SwissProt top hitse value%identityAlignment
P93295 Uncharacterized mitochondrial protein AtMg003106.7e-1334.69Show/hide
Query:  MGFWDIATFNKALLTKQCWRLVKFPESLMAKVMKGRYYQDGNFLKAKEGRNPSIIWRSILWGRSLFEEGYRWKIGDCSRILVDQDPWISSKSARISIN
        +GF D+  FN+ALL KQ +R++  P +L++++++ RY+   + ++   G  PS  WRSI+ GR L   G    IGD     V  D WI  ++    +N
Subjt:  MGFWDIATFNKALLTKQCWRLVKFPESLMAKVMKGRYYQDGNFLKAKEGRNPSIIWRSILWGRSLFEEGYRWKIGDCSRILVDQDPWISSKSARISIN

Arabidopsis top hitse value%identityAlignment
AT3G09510.1 Ribonuclease H-like superfamily protein5.3e-1333.09Show/hide
Query:  MKGRYYQDGNFLKAKEGRNPSIIWRSILWGRSLFEEGYRWKIGDCSRILVDQDPWISSKSARISINVKKDFKSKRVNVLINEDGSQ---KESLIREAFNP
        MK RY++D + L AK  +  S  W S+L G +L ++G R  IGD   I +  D  + S   R  +N ++ +K   +N L    GS     +S I +  + 
Subjt:  MKGRYYQDGNFLKAKEGRNPSIIWRSILWGRSLFEEGYRWKIGDCSRILVDQDPWISSKSARISINVKKDFKSKRVNVLINEDGSQ---KESLIREAFNP

Query:  IEAEEILNMPRCKSKAKDEIIWNEDPKGQFPVRSAYCCL
         +   I  +   KSK  D+IIWN +  G++ VRS Y  L
Subjt:  IEAEEILNMPRCKSKAKDEIIWNEDPKGQFPVRSAYCCL

AT4G29090.1 Ribonuclease H-like superfamily protein3.1e-2131.84Show/hide
Query:  MGFWDIATFNKALLTKQCWRLVKFPESLMAKVMKGRYYQDGNFLKAKEGRNPSIIWRSILWGRSLFEEGYRWKIGDCSRILVDQDPWISSKSARISINVK
        +GF DI  FN ALL KQ WR++  PESLMAKV K RY+   + L A  G  PS +W+SI   + +  +G R  +G+   I++ +  W+ SK A  ++ ++
Subjt:  MGFWDIATFNKALLTKQCWRLVKFPESLMAKVMKGRYYQDGNFLKAKEGRNPSIIWRSILWGRSLFEEGYRWKIGDCSRILVDQDPWISSKSARISINVK

Query:  K----DFKS----KRVNVLINEDGSQ-KESLIREAFNPIEAEEILNMPRCKSKAKDEIIWNEDPKGQFPVRSAYCCLLE
        +    ++ S     +V+ LI+E G + ++ +I   F  +E + I  +     +  D   W+    G + V+S Y  L +
Subjt:  K----DFKS----KRVNVLINEDGSQ-KESLIREAFNPIEAEEILNMPRCKSKAKDEIIWNEDPKGQFPVRSAYCCLLE

ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein4.8e-1434.69Show/hide
Query:  MGFWDIATFNKALLTKQCWRLVKFPESLMAKVMKGRYYQDGNFLKAKEGRNPSIIWRSILWGRSLFEEGYRWKIGDCSRILVDQDPWISSKSARISIN
        +GF D+  FN+ALL KQ +R++  P +L++++++ RY+   + ++   G  PS  WRSI+ GR L   G    IGD     V  D WI  ++    +N
Subjt:  MGFWDIATFNKALLTKQCWRLVKFPESLMAKVMKGRYYQDGNFLKAKEGRNPSIIWRSILWGRSLFEEGYRWKIGDCSRILVDQDPWISSKSARISIN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTTTTGGGATATTGCAACTTTCAACAAGGCCTTACTTACAAAGCAATGTTGGAGGCTAGTCAAGTTTCCAGAGTCTTTGATGGCAAAAGTGATGAAGGGCAGATA
CTATCAGGATGGAAACTTCCTCAAAGCTAAAGAAGGCAGAAATCCTTCCATTATTTGGAGGAGTATATTGTGGGGAAGATCTCTCTTTGAAGAAGGCTACCGTTGGAAGA
TAGGCGATTGTTCTCGGATTTTGGTTGACCAAGATCCTTGGATTAGCTCGAAAAGTGCAAGAATCTCTATTAATGTAAAAAAAGACTTCAAGAGCAAGAGAGTCAATGTG
CTTATTAATGAAGATGGTAGTCAGAAAGAATCGCTAATCCGAGAAGCTTTCAACCCCATAGAAGCGGAAGAAATCCTTAATATGCCTAGATGCAAATCCAAAGCGAAGGA
TGAAATAATTTGGAATGAGGATCCTAAAGGTCAATTCCCGGTGAGGAGTGCTTATTGTTGCCTTTTGGAGTGGTTAAAAATATAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTTTTGGGATATTGCAACTTTCAACAAGGCCTTACTTACAAAGCAATGTTGGAGGCTAGTCAAGTTTCCAGAGTCTTTGATGGCAAAAGTGATGAAGGGCAGATA
CTATCAGGATGGAAACTTCCTCAAAGCTAAAGAAGGCAGAAATCCTTCCATTATTTGGAGGAGTATATTGTGGGGAAGATCTCTCTTTGAAGAAGGCTACCGTTGGAAGA
TAGGCGATTGTTCTCGGATTTTGGTTGACCAAGATCCTTGGATTAGCTCGAAAAGTGCAAGAATCTCTATTAATGTAAAAAAAGACTTCAAGAGCAAGAGAGTCAATGTG
CTTATTAATGAAGATGGTAGTCAGAAAGAATCGCTAATCCGAGAAGCTTTCAACCCCATAGAAGCGGAAGAAATCCTTAATATGCCTAGATGCAAATCCAAAGCGAAGGA
TGAAATAATTTGGAATGAGGATCCTAAAGGTCAATTCCCGGTGAGGAGTGCTTATTGTTGCCTTTTGGAGTGGTTAAAAATATAA
Protein sequenceShow/hide protein sequence
MGFWDIATFNKALLTKQCWRLVKFPESLMAKVMKGRYYQDGNFLKAKEGRNPSIIWRSILWGRSLFEEGYRWKIGDCSRILVDQDPWISSKSARISINVKKDFKSKRVNV
LINEDGSQKESLIREAFNPIEAEEILNMPRCKSKAKDEIIWNEDPKGQFPVRSAYCCLLEWLKI